RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 A0A0G2JS52 829 aa39.23■■■■□ 3.87
SNRPA1-215ENST00000561187 MYT1Q01538 1121 aa39.23■■■■□ 3.87
SNRPA1-215ENST00000561187 BTG4Q9NY30 223 aa39.22■■■■□ 3.87
SNRPA1-215ENST00000561187 CRYBG1Q9Y4K1 1723 aa39.22■■■■□ 3.87
SNRPA1-215ENST00000561187 COL14A1Q05707 1796 aaKnown RBP39.19■■■■□ 3.86
SNRPA1-215ENST00000561187 TOPAZ1Q8N9V7 1692 aa39.18■■■■□ 3.86
SNRPA1-215ENST00000561187 NUTM2GQ5VZR2 741 aa39.17■■■■□ 3.86
SNRPA1-215ENST00000561187 SRCAPQ6ZRS2 3230 aa39.15■■■■□ 3.86
SNRPA1-215ENST00000561187 FAM98CQ17RN3 349 aaKnown RBP39.13■■■■□ 3.85
SNRPA1-215ENST00000561187 PRDM11Q9NQV5 511 aa39.13■■■■□ 3.85
SNRPA1-215ENST00000561187 CCDC125Q86Z20 511 aa39.12■■■■□ 3.85
SNRPA1-215ENST00000561187 BLMP54132 1417 aaPredicted RBP39.12■■■■□ 3.85
SNRPA1-215ENST00000561187 ACEP12821 1306 aa39.11■■■■□ 3.85
SNRPA1-215ENST00000561187 PHRF1Q9P1Y6 1649 aaKnown RBP39.11■■■■□ 3.85
SNRPA1-215ENST00000561187 KRT27Q7Z3Y8 459 aa39.09■■■■□ 3.85
SNRPA1-215ENST00000561187 KIAA0232Q92628 1395 aa39.08■■■■□ 3.85
SNRPA1-215ENST00000561187 SRPK2P78362 688 aaKnown RBP39.07■■■■□ 3.85
SNRPA1-215ENST00000561187 CHRNA2Q15822 529 aa39.07■■■■□ 3.85
SNRPA1-215ENST00000561187 DEFB132Q7Z7B7 95 aa39.07■■■■□ 3.85
SNRPA1-215ENST00000561187 ZRANB1Q9UGI0 708 aa39.07■■■■□ 3.85
SNRPA1-215ENST00000561187 CCDC61Q9Y6R9 512 aa39.07■■■■□ 3.85
SNRPA1-215ENST00000561187 CENPJQ9HC77 1338 aaPredicted RBP39.07■■■■□ 3.84
SNRPA1-215ENST00000561187 SIN3AQ96ST3 1273 aa39.06■■■■□ 3.84
SNRPA1-215ENST00000561187 QRICH2Q9H0J4 1663 aa39.06■■■■□ 3.84
SNRPA1-215ENST00000561187 POLR3AO14802 1390 aaPredicted RBP39.06■■■■□ 3.84
SNRPA1-215ENST00000561187 ONECUT3O60422 494 aaPredicted RBP39.05■■■■□ 3.84
SNRPA1-215ENST00000561187 NBPF8Q3BBV2 869 aa39.04■■■■□ 3.84
SNRPA1-215ENST00000561187 L3MBTL2Q969R5 705 aa39.04■■■■□ 3.84
SNRPA1-215ENST00000561187 ZC3H6P61129 1189 aaKnown RBP39.03■■■■□ 3.84
SNRPA1-215ENST00000561187 CABP2Q9NPB3 220 aa39.03■■■■□ 3.84
SNRPA1-215ENST00000561187 SF3B2Q13435 895 aaKnown RBP39.02■■■■□ 3.84
SNRPA1-215ENST00000561187 PPIP5K1Q6PFW1 1433 aa39.01■■■■□ 3.84
SNRPA1-215ENST00000561187 NEUROD1Q13562 356 aa39■■■■□ 3.83
SNRPA1-215ENST00000561187 STRN4Q9NRL3 753 aa39■■■■□ 3.83
SNRPA1-215ENST00000561187 SPATA31A5Q5VU36 1347 aa38.99■■■■□ 3.83
SNRPA1-215ENST00000561187 SPATA31A7Q8IWB4 1347 aa38.99■■■■□ 3.83
SNRPA1-215ENST00000561187 PLEKHG3A1L390 1219 aa38.98■■■■□ 3.83
SNRPA1-215ENST00000561187 FAM182BQ5T319 152 aa38.98■■■■□ 3.83
SNRPA1-215ENST00000561187 NRKQ7Z2Y5 1582 aa38.96■■■■□ 3.83
SNRPA1-215ENST00000561187 ABTB2Q8N961 1025 aa38.96■■■■□ 3.83
SNRPA1-215ENST00000561187 TRPM1Q7Z4N2 1603 aa38.93■■■■□ 3.82
SNRPA1-215ENST00000561187 THSD7AQ9UPZ6 1657 aa38.92■■■■□ 3.82
SNRPA1-215ENST00000561187 USP35Q9P2H5 1018 aa38.89■■■■□ 3.82
SNRPA1-215ENST00000561187 SPATA31A1Q5TZJ5 1347 aa38.88■■■■□ 3.81
SNRPA1-215ENST00000561187 ROCK2O75116 1388 aaKnown RBP38.86■■■■□ 3.81
SNRPA1-215ENST00000561187 CABP1Q9NZU7 370 aa38.85■■■■□ 3.81
SNRPA1-215ENST00000561187 USP19O94966 1318 aa38.85■■■■□ 3.81
SNRPA1-215ENST00000561187 ZBTB7CA1YPR0 619 aa38.83■■■■□ 3.81
SNRPA1-215ENST00000561187 SSH2Q76I76 1423 aa38.82■■■■□ 3.81
SNRPA1-215ENST00000561187 EVA1CP58658 441 aa38.82■■■■□ 3.8
SNRPA1-215ENST00000561187 CAMTA1Q9Y6Y1 1673 aa38.81■■■■□ 3.8
SNRPA1-215ENST00000561187 BAG6P46379 1132 aa38.8■■■■□ 3.8
SNRPA1-215ENST00000561187 USP6P35125 1406 aa38.8■■■■□ 3.8
SNRPA1-215ENST00000561187 NLRP13Q86W25 1043 aa38.79■■■■□ 3.8
SNRPA1-215ENST00000561187 LMO7Q8WWI1 1683 aa38.78■■■■□ 3.8
SNRPA1-215ENST00000561187 RGPD1P0DJD0 1748 aa38.78■■■■□ 3.8
SNRPA1-215ENST00000561187 LARP1Q6PKG0 1096 aaKnown RBP38.78■■■■□ 3.8
SNRPA1-215ENST00000561187 EVC2Q86UK5 1308 aa38.77■■■■□ 3.8
SNRPA1-215ENST00000561187 CPDO75976 1380 aa38.76■■■■□ 3.8
SNRPA1-215ENST00000561187 GCP02774 474 aa38.76■■■■□ 3.8
SNRPA1-215ENST00000561187 EN1Q05925 392 aaPredicted RBP38.74■■■■□ 3.79
SNRPA1-215ENST00000561187 NLRP6P59044 892 aa38.72■■■■□ 3.79
SNRPA1-215ENST00000561187 TNS1Q9HBL0 1735 aaKnown RBP38.72■■■■□ 3.79
SNRPA1-215ENST00000561187 PSDA5PKW4 1024 aaPredicted RBP38.71■■■■□ 3.79
SNRPA1-215ENST00000561187 PIK3C2AO00443 1686 aa38.71■■■■□ 3.79
SNRPA1-215ENST00000561187 COL5A2P05997 1499 aaPredicted RBP38.67■■■■□ 3.78
SNRPA1-215ENST00000561187 BRD4O60885 1362 aaPredicted RBP38.67■■■■□ 3.78
SNRPA1-215ENST00000561187 TRIM37O94972 964 aa38.66■■■■□ 3.78
SNRPA1-215ENST00000561187 SLIT3O75094 1523 aa38.66■■■■□ 3.78
SNRPA1-215ENST00000561187 TCP11L2Q8N4U5 519 aa38.65■■■■□ 3.78
SNRPA1-215ENST00000561187 BARGINQ6ZT62 677 aa38.64■■■■□ 3.78
SNRPA1-215ENST00000561187 SOX12O15370 315 aa38.63■■■■□ 3.77
SNRPA1-215ENST00000561187 PDE3BQ13370 1112 aa38.62■■■■□ 3.77
SNRPA1-215ENST00000561187 FAM196AQ6ZSG2 479 aa38.61■■■■□ 3.77
SNRPA1-215ENST00000561187 AKAP12Q02952 1782 aa38.61■■■■□ 3.77
SNRPA1-215ENST00000561187 EZH2Q15910 746 aaKnown RBP38.59■■■■□ 3.77
SNRPA1-215ENST00000561187 TTC21BQ7Z4L5 1316 aa38.58■■■■□ 3.77
SNRPA1-215ENST00000561187 DISP2A7MBM2 1401 aa38.56■■■■□ 3.76
SNRPA1-215ENST00000561187 CARD11Q9BXL7 1154 aa38.56■■■■□ 3.76
SNRPA1-215ENST00000561187 CRB1P82279 1406 aa38.55■■■■□ 3.76
SNRPA1-215ENST00000561187 AATKQ6ZMQ8 1374 aa38.55■■■■□ 3.76
SNRPA1-215ENST00000561187 TONSLQ96HA7 1378 aa38.55■■■■□ 3.76
SNRPA1-215ENST00000561187 APBA3O96018 575 aa38.53■■■■□ 3.76
SNRPA1-215ENST00000561187 R3HDM1Q15032 1099 aaKnown RBP38.52■■■■□ 3.76
SNRPA1-215ENST00000561187 KTN1Q86UP2 1357 aaKnown RBP38.52■■■■□ 3.76
SNRPA1-215ENST00000561187 PARP4Q9UKK3 1724 aaKnown RBP38.52■■■■□ 3.76
SNRPA1-215ENST00000561187 THRAP3Q9Y2W1 955 aaKnown RBP38.51■■■■□ 3.76
SNRPA1-215ENST00000561187 CPSF1Q10570 1443 aaKnown RBP38.51■■■■□ 3.76
SNRPA1-215ENST00000561187 COL18A1P39060 1754 aa38.51■■■■□ 3.76
SNRPA1-215ENST00000561187 TOM1L2Q6ZVM7 507 aa38.5■■■■□ 3.75
SNRPA1-215ENST00000561187 ZNF692Q9BU19 519 aaPredicted RBP38.49■■■■□ 3.75
SNRPA1-215ENST00000561187 AXIN2Q9Y2T1 843 aa38.49■■■■□ 3.75
SNRPA1-215ENST00000561187 LRP5O75197 1615 aa38.49■■■■□ 3.75
SNRPA1-215ENST00000561187 CAMKK2Q96RR4 588 aa38.47■■■■□ 3.75
SNRPA1-215ENST00000561187 MON2Q7Z3U7 1717 aa38.46■■■■□ 3.75
SNRPA1-215ENST00000561187 LRRC37A3O60309 1634 aa38.46■■■■□ 3.75
SNRPA1-215ENST00000561187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.46■■■■□ 3.75
SNRPA1-215ENST00000561187 RGPD5Q99666 1765 aa38.46■■■■□ 3.75
SNRPA1-215ENST00000561187 TTC21AQ8NDW8 1320 aa38.45■■■■□ 3.75
SNRPA1-215ENST00000561187 SBNO2Q9Y2G9 1366 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms