RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LRRN4Q8WUT4 740 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 CLP1Q92989 425 aaKnown RBP2.84□□□□□ -1.95
RTF1-207ENST00000561076 JPH4Q96JJ6 628 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 MYH16Q9H6N6 1097 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 CAPN10Q9HC96 672 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 METTL14Q9HCE5 456 aaKnown RBP2.84□□□□□ -1.95
RTF1-207ENST00000561076 ANO8Q9HCE9 1232 aaPredicted RBP2.84□□□□□ -1.95
RTF1-207ENST00000561076 HMX1Q9NP08 348 aaPredicted RBP2.84□□□□□ -1.95
RTF1-207ENST00000561076 EGFL7Q9UHF1 273 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 DCTN4Q9UJW0 460 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 ZMIZ1Q9ULJ6 1067 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 PCDHGA10Q9Y5H3 936 aa2.84□□□□□ -1.95
RTF1-207ENST00000561076 CADPSQ9ULU8 1353 aa2.84□□□□□ -1.96
RTF1-207ENST00000561076 ZBBXA8MT70 800 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 FOSBP53539 338 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 ATP2B2Q01814 1243 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 PSME1Q06323 249 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 AAMPQ13685 434 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 NR6A1Q15406 480 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 SWI5Q1ZZU3 235 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 ILDR1Q86SU0 546 aaPredicted RBP2.83□□□□□ -1.96
RTF1-207ENST00000561076 VPS37DQ86XT2 251 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 RNF135Q8IUD6 432 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 ANKMY2Q8IV38 441 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 ZNF454Q8N9F8 522 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 PMFBP1Q8TBY8 1022 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 PTCD2Q8WV60 388 aaKnown RBP2.83□□□□□ -1.96
RTF1-207ENST00000561076 ZDHHC16Q969W1 377 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 CDCA7LQ96GN5 454 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 TRIM34Q9BYJ4 488 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 ANO2Q9NQ90 1003 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 CUEDC1Q9NWM3 386 aaPredicted RBP2.83□□□□□ -1.96
RTF1-207ENST00000561076 PRKAG2Q9UGJ0 569 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 PNMA3Q9UL41 463 aa2.83□□□□□ -1.96
RTF1-207ENST00000561076 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.83□□□□□ -1.96
RTF1-207ENST00000561076 HOXA2O43364 376 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 PRMT3O60678 531 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 SEC24BO95487 1268 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 RECKO95980 971 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 MCCD1P59942 119 aaPredicted RBP2.82□□□□□ -1.96
RTF1-207ENST00000561076 DPYDQ12882 1025 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 ZNF211Q13398 564 aaPredicted RBP2.82□□□□□ -1.96
RTF1-207ENST00000561076 COL19A1Q14993 1142 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 C9orf131Q5VYM1 1079 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 GIMAP6Q6P9H5 292 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 C3orf67Q6ZVT6 689 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 PACS2Q86VP3 889 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 PLEKHM2Q8IWE5 1019 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 MICAL1Q8TDZ2 1067 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 PIK3R5Q8WYR1 880 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 RNF34Q969K3 372 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 VTI1AQ96AJ9 217 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 ZNF594Q96JF6 807 aaPredicted RBP2.82□□□□□ -1.96
RTF1-207ENST00000561076 ASB16Q96NS5 453 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 HINFPQ9BQA5 517 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 TMEM121BQ9BXQ6 578 aaPredicted RBP2.82□□□□□ -1.96
RTF1-207ENST00000561076 ZSWIM4Q9H7M6 989 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 NLRP2Q9NX02 1062 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 VTI1BQ9UEU0 232 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 BRPF3Q9ULD4 1205 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 IQSEC3Q9UPP2 1182 aaPredicted RBP2.82□□□□□ -1.96
RTF1-207ENST00000561076 TRPC6Q9Y210 931 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 NOD1Q9Y239 953 aa2.82□□□□□ -1.96
RTF1-207ENST00000561076 TLDC2A0PJX2 215 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 PLEKHD1A6NEE1 506 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 NDUFB5O43674 189 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 C21orf2O43822 256 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 ICMTO60725 284 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 FMNL1O95466 1100 aaPredicted RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 DNAJA1P31689 397 aaKnown RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 PSMD2Q13200 908 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 SF3B2Q13435 895 aaKnown RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 NCOA4Q13772 614 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 CRTC2Q53ET0 693 aaPredicted RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 HSP90AB2PQ58FF8 381 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 CCDC181Q5TID7 509 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 CC2D2BQ6DHV5 1058 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 SDE2Q6IQ49 451 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 PHLDB3Q6NSJ2 640 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 NUDT18Q6ZVK8 323 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 OGFOD1Q8N543 542 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 DHX38Q92620 1227 aaKnown RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 MRFAP1L1Q96HT8 127 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 BACH2Q9BYV9 841 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 LNPKQ9C0E8 428 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 BMP2KQ9NSY1 1161 aaPredicted RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 DNAAF2Q9NVR5 837 aaKnown RBP2.81□□□□□ -1.96
RTF1-207ENST00000561076 PCDHB9Q9Y5E1 797 aa2.81□□□□□ -1.96
RTF1-207ENST00000561076 ZC3H4Q9UPT8 1303 aaKnown RBP2.8□□□□□ -1.96
RTF1-207ENST00000561076 PIK3CDO00329 1044 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 PPP1R12AO14974 1030 aaPredicted RBP2.8□□□□□ -1.96
RTF1-207ENST00000561076 SORBS3O60504 671 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 STK10O94804 968 aaKnown RBP2.8□□□□□ -1.96
RTF1-207ENST00000561076 SLC34A2O95436 690 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 ZNF76P36508 570 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 MAPK8P45983 427 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 GCGRP47871 477 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 SEC13P55735 322 aa2.8□□□□□ -1.96
RTF1-207ENST00000561076 HDLBPQ00341 1268 aaKnown RBP2.8□□□□□ -1.96
RTF1-207ENST00000561076 FKBP4Q02790 459 aaKnown RBP eCLIP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms