RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
AP4E1-204ENST00000561004 PHOX2BQ99453 314 aa9.61□□□□□ -0.87
AP4E1-204ENST00000561004 MSTNO14793 375 aa9.6□□□□□ -0.87
AP4E1-204ENST00000561004 SEMA3EO15041 775 aa9.6□□□□□ -0.87
AP4E1-204ENST00000561004 KLF16Q9BXK1 252 aaPredicted RBP9.6□□□□□ -0.87
AP4E1-204ENST00000561004 COL25A1Q9BXS0 654 aaPredicted RBP9.6□□□□□ -0.87
AP4E1-204ENST00000561004 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
AP4E1-204ENST00000561004 SPTLC1O15269 473 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 ZIC2O95409 532 aaPredicted RBP9.59□□□□□ -0.87
AP4E1-204ENST00000561004 KRT76Q01546 638 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.87
AP4E1-204ENST00000561004 ZNF511Q8NB15 262 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 NANOS1Q8WY41 292 aaKnown RBP9.59□□□□□ -0.87
AP4E1-204ENST00000561004 BAP1Q92560 729 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
AP4E1-204ENST00000561004 PTPRNQ16849 979 aa9.58□□□□□ -0.88
AP4E1-204ENST00000561004 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
AP4E1-204ENST00000561004 SLURP2P0DP57 97 aa9.57□□□□□ -0.88
AP4E1-204ENST00000561004 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
AP4E1-204ENST00000561004 NR5A1Q13285 461 aa9.57□□□□□ -0.88
AP4E1-204ENST00000561004 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
AP4E1-204ENST00000561004 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
AP4E1-204ENST00000561004 GPR161Q8N6U8 529 aaKnown RBP9.56□□□□□ -0.88
AP4E1-204ENST00000561004 KCNH2Q12809 1159 aa9.55□□□□□ -0.88
AP4E1-204ENST00000561004 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
AP4E1-204ENST00000561004 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
AP4E1-204ENST00000561004 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
AP4E1-204ENST00000561004 MAP3K10Q02779 954 aa9.54□□□□□ -0.88
AP4E1-204ENST00000561004 HLA-CQ95604 372 aa9.54□□□□□ -0.88
AP4E1-204ENST00000561004 ENAMQ9NRM1 1142 aa9.54□□□□□ -0.88
AP4E1-204ENST00000561004 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
AP4E1-204ENST00000561004 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
AP4E1-204ENST00000561004 GPR37O15354 613 aa9.52□□□□□ -0.89
AP4E1-204ENST00000561004 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
AP4E1-204ENST00000561004 VSIG10Q8N0Z9 540 aa9.52□□□□□ -0.89
AP4E1-204ENST00000561004 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
AP4E1-204ENST00000561004 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
AP4E1-204ENST00000561004 C6orf229H3BNL8 230 aa9.51□□□□□ -0.89
AP4E1-204ENST00000561004 ARID5BQ14865 1188 aa9.51□□□□□ -0.89
AP4E1-204ENST00000561004 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
AP4E1-204ENST00000561004 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
AP4E1-204ENST00000561004 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
AP4E1-204ENST00000561004 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
AP4E1-204ENST00000561004 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
AP4E1-204ENST00000561004 PTSQ03393 145 aa9.49□□□□□ -0.89
AP4E1-204ENST00000561004 GALNT6Q8NCL4 622 aa9.49□□□□□ -0.89
AP4E1-204ENST00000561004 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
AP4E1-204ENST00000561004 PLA2G4EQ3MJ16 856 aa9.48□□□□□ -0.89
AP4E1-204ENST00000561004 SV2AQ7L0J3 742 aa9.48□□□□□ -0.89
AP4E1-204ENST00000561004 SPOCK3Q9BQ16 436 aa9.48□□□□□ -0.89
AP4E1-204ENST00000561004 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
AP4E1-204ENST00000561004 FDX1P10109 184 aa9.47□□□□□ -0.89
AP4E1-204ENST00000561004 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
AP4E1-204ENST00000561004 WHAMMQ8TF30 809 aa9.46□□□□□ -0.9
AP4E1-204ENST00000561004 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
AP4E1-204ENST00000561004 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
AP4E1-204ENST00000561004 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
AP4E1-204ENST00000561004 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
AP4E1-204ENST00000561004 KDM2AQ9Y2K7 1162 aa9.45□□□□□ -0.9
AP4E1-204ENST00000561004 PODNQ7Z5L7 613 aa9.44□□□□□ -0.9
AP4E1-204ENST00000561004 BEND7Q8N7W2 519 aaPredicted RBP9.44□□□□□ -0.9
AP4E1-204ENST00000561004 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
AP4E1-204ENST00000561004 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
AP4E1-204ENST00000561004 Q8N3U1 123 aa9.42□□□□□ -0.9
AP4E1-204ENST00000561004 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
AP4E1-204ENST00000561004 CDC14CA4D256 554 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 NR3C2P08235 984 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 ITGA6P23229 1130 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
AP4E1-204ENST00000561004 MAP2K5Q13163 448 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 VWA5B2Q8N398 1253 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
AP4E1-204ENST00000561004 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
AP4E1-204ENST00000561004 CTHP32929 405 aa9.4□□□□□ -0.9
AP4E1-204ENST00000561004 AGERQ15109 404 aa9.4□□□□□ -0.9
AP4E1-204ENST00000561004 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
AP4E1-204ENST00000561004 SLC35F4A4IF30 521 aa9.39□□□□□ -0.91
AP4E1-204ENST00000561004 CLCN1P35523 988 aa9.39□□□□□ -0.91
AP4E1-204ENST00000561004 GRM5P41594 1212 aa9.39□□□□□ -0.91
AP4E1-204ENST00000561004 KRTAP9-2Q9BYQ4 174 aa9.39□□□□□ -0.91
AP4E1-204ENST00000561004 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.38□□□□□ -0.91
AP4E1-204ENST00000561004 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
AP4E1-204ENST00000561004 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
AP4E1-204ENST00000561004 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
AP4E1-204ENST00000561004 LYPD4Q6UWN0 246 aa9.37□□□□□ -0.91
AP4E1-204ENST00000561004 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
AP4E1-204ENST00000561004 CELA2BP08218 269 aaPredicted RBP9.36□□□□□ -0.91
AP4E1-204ENST00000561004 PCDHGC3Q9UN70 934 aa9.36□□□□□ -0.91
AP4E1-204ENST00000561004 PROCP04070 461 aa9.35□□□□□ -0.91
AP4E1-204ENST00000561004 MTMR2Q13614 643 aa9.35□□□□□ -0.91
AP4E1-204ENST00000561004 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
AP4E1-204ENST00000561004 FOXJ1Q92949 421 aa9.35□□□□□ -0.91
AP4E1-204ENST00000561004 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
AP4E1-204ENST00000561004 IRF6O14896 467 aa9.34□□□□□ -0.91
AP4E1-204ENST00000561004 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
AP4E1-204ENST00000561004 MAP4K5Q9Y4K4 846 aa9.34□□□□□ -0.91
AP4E1-204ENST00000561004 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
AP4E1-204ENST00000561004 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
AP4E1-204ENST00000561004 KRTAP9-6A0A140TA67 174 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms