RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 RALGAPBQ86X10 1494 aa28.53■■■□□ 2.16
IPO4-215ENST00000560935 SLIT2O94813 1529 aa28.53■■■□□ 2.16
IPO4-215ENST00000560935 RGS12O14924 1447 aa28.52■■■□□ 2.16
IPO4-215ENST00000560935 PPIP5K1Q6PFW1 1433 aa28.52■■■□□ 2.16
IPO4-215ENST00000560935 EVC2Q86UK5 1308 aa28.52■■■□□ 2.16
IPO4-215ENST00000560935 CARD11Q9BXL7 1154 aa28.51■■■□□ 2.15
IPO4-215ENST00000560935 PLCH1Q4KWH8 1693 aa28.49■■■□□ 2.15
IPO4-215ENST00000560935 UNC5CLQ8IV45 518 aa28.49■■■□□ 2.15
IPO4-215ENST00000560935 NWD2Q9ULI1 1742 aa28.48■■■□□ 2.15
IPO4-215ENST00000560935 CRYBG1Q9Y4K1 1723 aa28.48■■■□□ 2.15
IPO4-215ENST00000560935 GJD4Q96KN9 370 aaPredicted RBP28.43■■■□□ 2.14
IPO4-215ENST00000560935 SBNO2Q9Y2G9 1366 aa28.42■■■□□ 2.14
IPO4-215ENST00000560935 CABP1Q9NZU7 370 aa28.42■■■□□ 2.14
IPO4-215ENST00000560935 PHRF1Q9P1Y6 1649 aaKnown RBP28.42■■■□□ 2.14
IPO4-215ENST00000560935 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
IPO4-215ENST00000560935 BRD4O60885 1362 aaPredicted RBP28.41■■■□□ 2.14
IPO4-215ENST00000560935 FAM83GA6ND36 823 aa28.41■■■□□ 2.14
IPO4-215ENST00000560935 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
IPO4-215ENST00000560935 NUTM2GQ5VZR2 741 aa28.38■■■□□ 2.13
IPO4-215ENST00000560935 ABTB2Q8N961 1025 aa28.38■■■□□ 2.13
IPO4-215ENST00000560935 ATAD2Q6PL18 1390 aa28.37■■■□□ 2.13
IPO4-215ENST00000560935 GLI3P10071 1580 aa28.37■■■□□ 2.13
IPO4-215ENST00000560935 USP6P35125 1406 aa28.37■■■□□ 2.13
IPO4-215ENST00000560935 VPS72Q15906 364 aa28.37■■■□□ 2.13
IPO4-215ENST00000560935 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.13
IPO4-215ENST00000560935 NRAPQ86VF7 1730 aa28.36■■■□□ 2.13
IPO4-215ENST00000560935 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
IPO4-215ENST00000560935 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
IPO4-215ENST00000560935 BTG4Q9NY30 223 aa28.35■■■□□ 2.13
IPO4-215ENST00000560935 CCDC9Q9Y3X0 531 aaKnown RBP28.35■■■□□ 2.13
IPO4-215ENST00000560935 AKAP12Q02952 1782 aa28.32■■■□□ 2.12
IPO4-215ENST00000560935 NLRP13Q86W25 1043 aa28.32■■■□□ 2.12
IPO4-215ENST00000560935 KIAA0232Q92628 1395 aa28.32■■■□□ 2.12
IPO4-215ENST00000560935 NRKQ7Z2Y5 1582 aa28.32■■■□□ 2.12
IPO4-215ENST00000560935 USP19O94966 1318 aa28.3■■■□□ 2.12
IPO4-215ENST00000560935 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
IPO4-215ENST00000560935 ZC3H6P61129 1189 aaKnown RBP28.28■■■□□ 2.12
IPO4-215ENST00000560935 TIMELESSQ9UNS1 1208 aa28.28■■■□□ 2.12
IPO4-215ENST00000560935 SSH2Q76I76 1423 aa28.27■■■□□ 2.12
IPO4-215ENST00000560935 NLRP6P59044 892 aa28.25■■■□□ 2.11
IPO4-215ENST00000560935 CHRNA2Q15822 529 aa28.25■■■□□ 2.11
IPO4-215ENST00000560935 PIK3C2AO00443 1686 aa28.25■■■□□ 2.11
IPO4-215ENST00000560935 CPSF1Q10570 1443 aaKnown RBP28.25■■■□□ 2.11
IPO4-215ENST00000560935 CPDO75976 1380 aa28.24■■■□□ 2.11
IPO4-215ENST00000560935 KTN1Q86UP2 1357 aaKnown RBP28.24■■■□□ 2.11
IPO4-215ENST00000560935 ST20-MTHFSA0A0A6YYL1 179 aa28.23■■■□□ 2.11
IPO4-215ENST00000560935 GCP02774 474 aa28.23■■■□□ 2.11
IPO4-215ENST00000560935 MON2Q7Z3U7 1717 aa28.23■■■□□ 2.11
IPO4-215ENST00000560935 TTC21BQ7Z4L5 1316 aa28.22■■■□□ 2.11
IPO4-215ENST00000560935 SLC24A1O60721 1099 aa28.22■■■□□ 2.11
IPO4-215ENST00000560935 SEPT12Q8IYM1 358 aa28.22■■■□□ 2.11
IPO4-215ENST00000560935 BRWD3Q6RI45 1802 aa28.22■■■□□ 2.11
IPO4-215ENST00000560935 TTC21AQ8NDW8 1320 aa28.21■■■□□ 2.11
IPO4-215ENST00000560935 TMC1Q8TDI8 760 aa28.21■■■□□ 2.11
IPO4-215ENST00000560935 PUS7Q96PZ0 661 aaKnown RBP28.21■■■□□ 2.11
IPO4-215ENST00000560935 SLIT3O75094 1523 aa28.21■■■□□ 2.11
IPO4-215ENST00000560935 ONECUT3O60422 494 aaPredicted RBP28.2■■■□□ 2.1
IPO4-215ENST00000560935 SPATA31A5Q5VU36 1347 aa28.19■■■□□ 2.1
IPO4-215ENST00000560935 SPATA31A7Q8IWB4 1347 aa28.19■■■□□ 2.1
IPO4-215ENST00000560935 TESK2Q96S53 571 aa28.19■■■□□ 2.1
IPO4-215ENST00000560935 USP47Q96K76 1375 aa28.19■■■□□ 2.1
IPO4-215ENST00000560935 A0A0G2JS52 829 aa28.18■■■□□ 2.1
IPO4-215ENST00000560935 MYT1Q01538 1121 aa28.18■■■□□ 2.1
IPO4-215ENST00000560935 STRN4Q9NRL3 753 aa28.18■■■□□ 2.1
IPO4-215ENST00000560935 LMO7Q8WWI1 1683 aa28.18■■■□□ 2.1
IPO4-215ENST00000560935 FAM98CQ17RN3 349 aaKnown RBP28.17■■■□□ 2.1
IPO4-215ENST00000560935 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
IPO4-215ENST00000560935 HDGFL2Q7Z4V5 671 aaPredicted RBP28.16■■■□□ 2.1
IPO4-215ENST00000560935 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
IPO4-215ENST00000560935 EVA1CP58658 441 aa28.15■■■□□ 2.1
IPO4-215ENST00000560935 CAMTA1Q9Y6Y1 1673 aa28.15■■■□□ 2.1
IPO4-215ENST00000560935 SLC12A5Q9H2X9 1139 aa28.14■■■□□ 2.1
IPO4-215ENST00000560935 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
IPO4-215ENST00000560935 TERF2IPQ9NYB0 399 aa28.13■■■□□ 2.09
IPO4-215ENST00000560935 SPATA31A1Q5TZJ5 1347 aa28.13■■■□□ 2.09
IPO4-215ENST00000560935 ZBTB7CA1YPR0 619 aa28.12■■■□□ 2.09
IPO4-215ENST00000560935 KRT27Q7Z3Y8 459 aa28.12■■■□□ 2.09
IPO4-215ENST00000560935 KCNH5Q8NCM2 988 aa28.11■■■□□ 2.09
IPO4-215ENST00000560935 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
IPO4-215ENST00000560935 TMF1P82094 1093 aa28.1■■■□□ 2.09
IPO4-215ENST00000560935 CCDC125Q86Z20 511 aa28.1■■■□□ 2.09
IPO4-215ENST00000560935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.1■■■□□ 2.09
IPO4-215ENST00000560935 EDC4Q6P2E9 1401 aaKnown RBP28.09■■■□□ 2.09
IPO4-215ENST00000560935 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
IPO4-215ENST00000560935 AATKQ6ZMQ8 1374 aa28.09■■■□□ 2.09
IPO4-215ENST00000560935 USP54Q70EL1 1684 aa28.08■■■□□ 2.09
IPO4-215ENST00000560935 COL5A2P05997 1499 aaPredicted RBP28.08■■■□□ 2.09
IPO4-215ENST00000560935 LARP1Q6PKG0 1096 aaKnown RBP28.06■■■□□ 2.08
IPO4-215ENST00000560935 USP31Q70CQ4 1352 aa28.06■■■□□ 2.08
IPO4-215ENST00000560935 EP400Q96L91 3159 aa28.05■■■□□ 2.08
IPO4-215ENST00000560935 SOX12O15370 315 aa28.05■■■□□ 2.08
IPO4-215ENST00000560935 USP35Q9P2H5 1018 aa28.05■■■□□ 2.08
IPO4-215ENST00000560935 COL18A1P39060 1754 aa28.04■■■□□ 2.08
IPO4-215ENST00000560935 NFAT5O94916 1531 aa28.04■■■□□ 2.08
IPO4-215ENST00000560935 BLMP54132 1417 aaPredicted RBP28.04■■■□□ 2.08
IPO4-215ENST00000560935 NME9Q86XW9 330 aa28.04■■■□□ 2.08
IPO4-215ENST00000560935 ARHGEF25Q86VW2 580 aa28.03■■■□□ 2.08
IPO4-215ENST00000560935 CDCA8Q53HL2 280 aa28.02■■■□□ 2.08
IPO4-215ENST00000560935 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
IPO4-215ENST00000560935 TCP11L2Q8N4U5 519 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms