RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
ZEB1-220ENST00000560909 C9orf84Q5VXU9 1444 aa8.26□□□□□ -1.09
ZEB1-220ENST00000560909 SPAG9O60271 1321 aaKnown RBP8.26□□□□□ -1.09
ZEB1-220ENST00000560909 MAGI2Q86UL8 1455 aa8.26□□□□□ -1.09
ZEB1-220ENST00000560909 ZMYM4Q5VZL5 1548 aa8.25□□□□□ -1.09
ZEB1-220ENST00000560909 RNF223E7ERA6 249 aa8.25□□□□□ -1.09
ZEB1-220ENST00000560909 RAPGEF3O95398 923 aa8.25□□□□□ -1.09
ZEB1-220ENST00000560909 PCDHGA10Q9Y5H3 936 aa8.25□□□□□ -1.09
ZEB1-220ENST00000560909 HFM1A2PYH4 1435 aa8.25□□□□□ -1.09
ZEB1-220ENST00000560909 ANKRD30AQ9BXX3 1397 aa8.24□□□□□ -1.09
ZEB1-220ENST00000560909 FRMPD1Q5SYB0 1578 aa8.24□□□□□ -1.09
ZEB1-220ENST00000560909 NAIPQ13075 1403 aa8.24□□□□□ -1.09
ZEB1-220ENST00000560909 STK25O00506 426 aa8.24□□□□□ -1.09
ZEB1-220ENST00000560909 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
ZEB1-220ENST00000560909 GMPRP36959 345 aa8.23□□□□□ -1.09
ZEB1-220ENST00000560909 PCGF6Q9BYE7 350 aa8.23□□□□□ -1.09
ZEB1-220ENST00000560909 SNRPBP14678 240 aaKnown RBP8.22□□□□□ -1.09
ZEB1-220ENST00000560909 SAMD7Q7Z3H4 446 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 CHIC2Q9UKJ5 165 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 RICTORQ6R327 1708 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 ZFYVE16Q7Z3T8 1539 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
ZEB1-220ENST00000560909 INO80Q9ULG1 1556 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-220ENST00000560909 DHX29Q7Z478 1369 aaKnown RBP8.22□□□□□ -1.09
ZEB1-220ENST00000560909 KIF15Q9NS87 1388 aa8.22□□□□□ -1.09
ZEB1-220ENST00000560909 AVPP01185 164 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 ITGAEP38570 1179 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 LIAT1Q6ZQX7 453 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 PLXNC1O60486 1568 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 TSPOAP1O95153 1857 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.1
ZEB1-220ENST00000560909 SETD5Q9C0A6 1442 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 ATP7AQ04656 1500 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 APLP1P51693 650 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 COPS2P61201 443 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 RRP7BPQ9NSQ0 103 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 KIDINS220Q9ULH0 1771 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 YEATS2Q9ULM3 1422 aa8.2□□□□□ -1.1
ZEB1-220ENST00000560909 REREQ9P2R6 1566 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 ERBINQ96RT1 1412 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 ATP10AO60312 1499 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
ZEB1-220ENST00000560909 HECW2Q9P2P5 1572 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 GSK3AP49840 483 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 FBXW7Q969H0 707 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 A2MP01023 1474 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 AGLP35573 1532 aa8.18□□□□□ -1.1
ZEB1-220ENST00000560909 RAB3GAP2Q9H2M9 1393 aa8.17□□□□□ -1.1
ZEB1-220ENST00000560909 DIP2CQ9Y2E4 1556 aa8.17□□□□□ -1.1
ZEB1-220ENST00000560909 KDM6BO15054 1643 aa8.16□□□□□ -1.1
ZEB1-220ENST00000560909 TYW1BQ6NUM6 668 aa8.16□□□□□ -1.1
ZEB1-220ENST00000560909 ADGBQ8N7X0 1667 aa8.16□□□□□ -1.1
ZEB1-220ENST00000560909 ARHGEF40Q8TER5 1519 aa8.16□□□□□ -1.1
ZEB1-220ENST00000560909 ABCA6Q8N139 1617 aa8.15□□□□□ -1.1
ZEB1-220ENST00000560909 BCORL1Q5H9F3 1711 aa8.15□□□□□ -1.11
ZEB1-220ENST00000560909 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
ZEB1-220ENST00000560909 ZPR1O75312 459 aa8.14□□□□□ -1.11
ZEB1-220ENST00000560909 TMEM151AQ8N4L1 468 aa8.14□□□□□ -1.11
ZEB1-220ENST00000560909 ANKLE1Q8NAG6 615 aa8.14□□□□□ -1.11
ZEB1-220ENST00000560909 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
ZEB1-220ENST00000560909 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-220ENST00000560909 FOXC1Q12948 553 aa8.13□□□□□ -1.11
ZEB1-220ENST00000560909 C6orf132Q5T0Z8 1188 aa8.13□□□□□ -1.11
ZEB1-220ENST00000560909 EIF2AK4Q9P2K8 1649 aaKnown RBP8.13□□□□□ -1.11
ZEB1-220ENST00000560909 VWDEQ8N2E2 1590 aa8.13□□□□□ -1.11
ZEB1-220ENST00000560909 KIF3BO15066 747 aa8.12□□□□□ -1.11
ZEB1-220ENST00000560909 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
ZEB1-220ENST00000560909 PKD2L1Q9P0L9 805 aa8.12□□□□□ -1.11
ZEB1-220ENST00000560909 PPEF1O14829 653 aaPredicted RBP8.11□□□□□ -1.11
ZEB1-220ENST00000560909 RNF40O75150 1001 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 PPP1R15BQ5SWA1 713 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 PACS2Q86VP3 889 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 LMTK2Q8IWU2 1503 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 PZPP20742 1482 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 MROH1Q8NDA8 1641 aa8.11□□□□□ -1.11
ZEB1-220ENST00000560909 RNF17Q9BXT8 1623 aaKnown RBP8.11□□□□□ -1.11
ZEB1-220ENST00000560909 NUP155O75694 1391 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 DHX57Q6P158 1386 aaKnown RBP8.1□□□□□ -1.11
ZEB1-220ENST00000560909 UNC13BO14795 1591 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-220ENST00000560909 FAM135AQ9P2D6 1515 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 IRF7Q92985 503 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 MPHOSPH9Q99550 1183 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
ZEB1-220ENST00000560909 PHF14O94880 888 aa8.09□□□□□ -1.11
ZEB1-220ENST00000560909 GDF11O95390 407 aa8.09□□□□□ -1.11
ZEB1-220ENST00000560909 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
ZEB1-220ENST00000560909 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
ZEB1-220ENST00000560909 LMOD2Q6P5Q4 547 aa8.08□□□□□ -1.12
ZEB1-220ENST00000560909 TSKSQ9UJT2 592 aa8.08□□□□□ -1.12
ZEB1-220ENST00000560909 ARHGAP31Q2M1Z3 1444 aa8.08□□□□□ -1.12
ZEB1-220ENST00000560909 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
ZEB1-220ENST00000560909 SMAPO00193 183 aa8.07□□□□□ -1.12
ZEB1-220ENST00000560909 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms