RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PLEKHH1Q9ULM0 1364 aa14.54□□□□□ -0.08
HERC1-210ENST00000560897 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
HERC1-210ENST00000560897 ITGAEP38570 1179 aa14.53□□□□□ -0.08
HERC1-210ENST00000560897 PRDM11Q9NQV5 511 aa14.53□□□□□ -0.08
HERC1-210ENST00000560897 UTRNP46939 3433 aa14.52□□□□□ -0.08
HERC1-210ENST00000560897 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
HERC1-210ENST00000560897 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
HERC1-210ENST00000560897 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
HERC1-210ENST00000560897 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
HERC1-210ENST00000560897 STRN4Q9NRL3 753 aa14.5□□□□□ -0.09
HERC1-210ENST00000560897 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
HERC1-210ENST00000560897 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
HERC1-210ENST00000560897 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
HERC1-210ENST00000560897 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
HERC1-210ENST00000560897 MYOM1P52179 1685 aa14.48□□□□□ -0.09
HERC1-210ENST00000560897 ZBTB7AO95365 584 aa14.47□□□□□ -0.09
HERC1-210ENST00000560897 TMEM132EQ6IEE7 984 aa14.47□□□□□ -0.09
HERC1-210ENST00000560897 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
HERC1-210ENST00000560897 ADGRF5Q8IZF2 1346 aa14.46□□□□□ -0.09
HERC1-210ENST00000560897 C11orf95C9JLR9 678 aaPredicted RBP14.46□□□□□ -0.09
HERC1-210ENST00000560897 TRPM3Q9HCF6 1732 aaPredicted RBP14.46□□□□□ -0.1
HERC1-210ENST00000560897 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
HERC1-210ENST00000560897 CASZ1Q86V15 1759 aa14.45□□□□□ -0.1
HERC1-210ENST00000560897 EVA1CP58658 441 aa14.45□□□□□ -0.1
HERC1-210ENST00000560897 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
HERC1-210ENST00000560897 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
HERC1-210ENST00000560897 BARGINQ6ZT62 677 aa14.44□□□□□ -0.1
HERC1-210ENST00000560897 SYT17Q9BSW7 474 aa14.44□□□□□ -0.1
HERC1-210ENST00000560897 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
HERC1-210ENST00000560897 BCL11BQ9C0K0 894 aaPredicted RBP14.44□□□□□ -0.1
HERC1-210ENST00000560897 RGPD3A6NKT7 1758 aaPredicted RBP14.44□□□□□ -0.1
HERC1-210ENST00000560897 RGPD4Q7Z3J3 1758 aa14.44□□□□□ -0.1
HERC1-210ENST00000560897 DLC1Q96QB1 1528 aa14.43□□□□□ -0.1
HERC1-210ENST00000560897 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
HERC1-210ENST00000560897 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
HERC1-210ENST00000560897 KIAA0232Q92628 1395 aa14.43□□□□□ -0.1
HERC1-210ENST00000560897 SAFB2Q14151 953 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC1-210ENST00000560897 CHRNA2Q15822 529 aa14.42□□□□□ -0.1
HERC1-210ENST00000560897 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
HERC1-210ENST00000560897 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
HERC1-210ENST00000560897 CRYBG1Q9Y4K1 1723 aa14.41□□□□□ -0.1
HERC1-210ENST00000560897 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
HERC1-210ENST00000560897 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
HERC1-210ENST00000560897 EIF3AQ14152 1382 aaKnown RBP14.4□□□□□ -0.1
HERC1-210ENST00000560897 PTGER2P43116 358 aa14.4□□□□□ -0.1
HERC1-210ENST00000560897 GPR162Q16538 588 aa14.4□□□□□ -0.1
HERC1-210ENST00000560897 RGL3Q3MIN7 710 aa14.4□□□□□ -0.1
HERC1-210ENST00000560897 POGKQ9P215 609 aa14.4□□□□□ -0.1
HERC1-210ENST00000560897 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
HERC1-210ENST00000560897 PLSCR1O15162 318 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 NGDNQ8NEJ9 315 aaKnown RBP14.39□□□□□ -0.11
HERC1-210ENST00000560897 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 STK32BQ9NY57 414 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 OVOS2A0A0G2JMS6 1433 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 CEP350Q5VT06 3117 aa14.39□□□□□ -0.11
HERC1-210ENST00000560897 DHX57Q6P158 1386 aaKnown RBP14.38□□□□□ -0.11
HERC1-210ENST00000560897 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
HERC1-210ENST00000560897 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
HERC1-210ENST00000560897 PDGFDQ9GZP0 370 aaPredicted RBP14.38□□□□□ -0.11
HERC1-210ENST00000560897 MTFR1LQ9H019 292 aa14.37□□□□□ -0.11
HERC1-210ENST00000560897 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
HERC1-210ENST00000560897 PARP4Q9UKK3 1724 aaKnown RBP14.36□□□□□ -0.11
HERC1-210ENST00000560897 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
HERC1-210ENST00000560897 LARP1Q6PKG0 1096 aaKnown RBP14.35□□□□□ -0.11
HERC1-210ENST00000560897 ARXQ96QS3 562 aa14.35□□□□□ -0.11
HERC1-210ENST00000560897 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
HERC1-210ENST00000560897 SBF2Q86WG5 1849 aa14.34□□□□□ -0.11
HERC1-210ENST00000560897 ATP7BP35670 1465 aa14.32□□□□□ -0.12
HERC1-210ENST00000560897 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
HERC1-210ENST00000560897 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
HERC1-210ENST00000560897 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
HERC1-210ENST00000560897 HIRIP3Q9BW71 556 aaPredicted RBP14.32□□□□□ -0.12
HERC1-210ENST00000560897 MAP3K5Q99683 1374 aa14.32□□□□□ -0.12
HERC1-210ENST00000560897 NUTM2GQ5VZR2 741 aa14.31□□□□□ -0.12
HERC1-210ENST00000560897 C14orf93Q9H972 538 aaKnown RBP14.31□□□□□ -0.12
HERC1-210ENST00000560897 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
HERC1-210ENST00000560897 DDB1Q16531 1140 aa14.3□□□□□ -0.12
HERC1-210ENST00000560897 SPATA31E1Q6ZUB1 1445 aa14.3□□□□□ -0.12
HERC1-210ENST00000560897 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
HERC1-210ENST00000560897 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
HERC1-210ENST00000560897 SHANK3Q9BYB0 1731 aa14.29□□□□□ -0.12
HERC1-210ENST00000560897 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
HERC1-210ENST00000560897 CFAP70Q5T0N1 1121 aa14.28□□□□□ -0.12
HERC1-210ENST00000560897 SGIP1Q9BQI5 828 aa14.28□□□□□ -0.12
HERC1-210ENST00000560897 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
HERC1-210ENST00000560897 LRRC37A3O60309 1634 aa14.27□□□□□ -0.12
HERC1-210ENST00000560897 CRB1P82279 1406 aa14.27□□□□□ -0.12
HERC1-210ENST00000560897 HSPA6P17066 643 aa14.27□□□□□ -0.13
HERC1-210ENST00000560897 PROM2Q8N271 834 aa14.27□□□□□ -0.13
HERC1-210ENST00000560897 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
HERC1-210ENST00000560897 MSH5O43196 834 aa14.26□□□□□ -0.13
HERC1-210ENST00000560897 AKAP12Q02952 1782 aa14.26□□□□□ -0.13
HERC1-210ENST00000560897 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
HERC1-210ENST00000560897 CPDO75976 1380 aa14.25□□□□□ -0.13
HERC1-210ENST00000560897 POLD1P28340 1107 aa14.25□□□□□ -0.13
HERC1-210ENST00000560897 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
HERC1-210ENST00000560897 ZBTB7CA1YPR0 619 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms