RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 FOXO3O43524 673 aa10.04□□□□□ -0.8
IDH3A-220ENST00000560667 HSPA1LP34931 641 aa10.04□□□□□ -0.8
IDH3A-220ENST00000560667 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
IDH3A-220ENST00000560667 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
IDH3A-220ENST00000560667 TTC21BQ7Z4L5 1316 aa10.03□□□□□ -0.8
IDH3A-220ENST00000560667 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
IDH3A-220ENST00000560667 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
IDH3A-220ENST00000560667 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.8
IDH3A-220ENST00000560667 RRS1Q15050 365 aaKnown RBP10.02□□□□□ -0.81
IDH3A-220ENST00000560667 ZNF692Q9BU19 519 aaPredicted RBP10.02□□□□□ -0.81
IDH3A-220ENST00000560667 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
IDH3A-220ENST00000560667 CCDC146Q8IYE0 955 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 PHF8Q9UPP1 1060 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 EMILIN1Q9Y6C2 1016 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 ADGRB2O60241 1585 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
IDH3A-220ENST00000560667 ADGRL3Q9HAR2 1447 aa10□□□□□ -0.81
IDH3A-220ENST00000560667 USP6P35125 1406 aa9.99□□□□□ -0.81
IDH3A-220ENST00000560667 SSH2Q76I76 1423 aa9.99□□□□□ -0.81
IDH3A-220ENST00000560667 CENPBP07199 599 aaPredicted RBP9.99□□□□□ -0.81
IDH3A-220ENST00000560667 CDC42BPGQ6DT37 1551 aa9.99□□□□□ -0.81
IDH3A-220ENST00000560667 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
IDH3A-220ENST00000560667 PSME1Q06323 249 aa9.98□□□□□ -0.81
IDH3A-220ENST00000560667 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
IDH3A-220ENST00000560667 ATF3P18847 181 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 NLRP6P59044 892 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 MYT1Q01538 1121 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 ABTB2Q8N961 1025 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 COG3Q96JB2 828 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 NWD1Q149M9 1564 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 FMN2Q9NZ56 1722 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 TOPAZ1Q8N9V7 1692 aa9.97□□□□□ -0.81
IDH3A-220ENST00000560667 LRRC7Q96NW7 1537 aa9.96□□□□□ -0.81
IDH3A-220ENST00000560667 LMOD2Q6P5Q4 547 aa9.96□□□□□ -0.82
IDH3A-220ENST00000560667 CDCA7LQ96GN5 454 aa9.96□□□□□ -0.82
IDH3A-220ENST00000560667 C1orf167Q5SNV9 1468 aa9.96□□□□□ -0.82
IDH3A-220ENST00000560667 AKAP12Q02952 1782 aa9.96□□□□□ -0.82
IDH3A-220ENST00000560667 WDR43Q15061 677 aaKnown RBP eCLIP9.95□□□□□ -0.82
IDH3A-220ENST00000560667 HSP90AB2PQ58FF8 381 aa9.95□□□□□ -0.82
IDH3A-220ENST00000560667 KRT28Q7Z3Y7 464 aa9.95□□□□□ -0.82
IDH3A-220ENST00000560667 XIRP1Q702N8 1843 aaKnown RBP9.95□□□□□ -0.82
IDH3A-220ENST00000560667 APAF1O14727 1248 aa9.95□□□□□ -0.82
IDH3A-220ENST00000560667 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
IDH3A-220ENST00000560667 ANKARQ7Z5J8 1434 aa9.95□□□□□ -0.82
IDH3A-220ENST00000560667 MON2Q7Z3U7 1717 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 NSD2O96028 1365 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 U2SURPO15042 1029 aaKnown RBP9.94□□□□□ -0.82
IDH3A-220ENST00000560667 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 MST1RQ04912 1400 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
IDH3A-220ENST00000560667 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
IDH3A-220ENST00000560667 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
IDH3A-220ENST00000560667 PHF23Q9BUL5 403 aaPredicted RBP9.94□□□□□ -0.82
IDH3A-220ENST00000560667 MAP2P11137 1827 aaKnown RBP9.93□□□□□ -0.82
IDH3A-220ENST00000560667 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
IDH3A-220ENST00000560667 HMOX1P09601 288 aa9.93□□□□□ -0.82
IDH3A-220ENST00000560667 BRINP3Q76B58 766 aa9.93□□□□□ -0.82
IDH3A-220ENST00000560667 ITSN1Q15811 1721 aa9.93□□□□□ -0.82
IDH3A-220ENST00000560667 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
IDH3A-220ENST00000560667 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 MAP3K19Q56UN5 1328 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 IL13P35225 146 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 OVOS2A0A0J9YW53 1432 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 OVOS2Q6IE36 1432 aa9.92□□□□□ -0.82
IDH3A-220ENST00000560667 PNPLA6Q8IY17 1366 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 NRKQ7Z2Y5 1582 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 DIAPH1O60610 1272 aaKnown RBP9.91□□□□□ -0.82
IDH3A-220ENST00000560667 PHACTR3Q96KR7 559 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 MSH6P52701 1360 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 TTC21AQ8NDW8 1320 aa9.91□□□□□ -0.82
IDH3A-220ENST00000560667 PIK3C2AO00443 1686 aa9.9□□□□□ -0.82
IDH3A-220ENST00000560667 SHPRHQ149N8 1683 aa9.9□□□□□ -0.82
IDH3A-220ENST00000560667 COL3A1P02461 1466 aaPredicted RBP9.9□□□□□ -0.82
IDH3A-220ENST00000560667 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
IDH3A-220ENST00000560667 CFAP53Q96M91 514 aa9.9□□□□□ -0.82
IDH3A-220ENST00000560667 PLEKHF1Q96S99 279 aa9.9□□□□□ -0.82
IDH3A-220ENST00000560667 EIF4A2Q14240 407 aaKnown RBP9.89□□□□□ -0.83
IDH3A-220ENST00000560667 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
IDH3A-220ENST00000560667 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 BLMP54132 1417 aaPredicted RBP9.89□□□□□ -0.83
IDH3A-220ENST00000560667 GCP02774 474 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
IDH3A-220ENST00000560667 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 SUPT16HQ9Y5B9 1047 aaKnown RBP9.89□□□□□ -0.83
IDH3A-220ENST00000560667 AATKQ6ZMQ8 1374 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 ANKRD26Q9UPS8 1709 aa9.89□□□□□ -0.83
IDH3A-220ENST00000560667 IRX6P78412 446 aaPredicted RBP9.88□□□□□ -0.83
IDH3A-220ENST00000560667 NCOA3Q9Y6Q9 1424 aa9.87□□□□□ -0.83
IDH3A-220ENST00000560667 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
IDH3A-220ENST00000560667 MARF1Q9Y4F3 1742 aaKnown RBP9.87□□□□□ -0.83
IDH3A-220ENST00000560667 AMPHP49418 695 aa9.87□□□□□ -0.83
IDH3A-220ENST00000560667 PRKAR2BP31323 418 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms