RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
TRPM1-211ENST00000560658 PNPLA6Q8IY17 1366 aa22.58■■□□□ 1.21
TRPM1-211ENST00000560658 DZIP1LQ8IYY4 767 aaKnown RBP22.57■■□□□ 1.2
TRPM1-211ENST00000560658 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
TRPM1-211ENST00000560658 NLRP1Q9C000 1473 aa22.57■■□□□ 1.2
TRPM1-211ENST00000560658 TMPOP42166 694 aaKnown RBP22.57■■□□□ 1.2
TRPM1-211ENST00000560658 AGLP35573 1532 aa22.56■■□□□ 1.2
TRPM1-211ENST00000560658 POGKQ9P215 609 aa22.56■■□□□ 1.2
TRPM1-211ENST00000560658 FTSJ3Q8IY81 847 aaKnown RBP22.55■■□□□ 1.2
TRPM1-211ENST00000560658 DDX19BQ9UMR2 479 aa22.55■■□□□ 1.2
TRPM1-211ENST00000560658 ATP7BP35670 1465 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 CD163L1Q9NR16 1453 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 ALKQ9UM73 1620 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 GSE1Q14687 1217 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 USP19O94966 1318 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 YEATS2Q9ULM3 1422 aa22.54■■□□□ 1.2
TRPM1-211ENST00000560658 HDAC1Q13547 482 aaPredicted RBP22.53■■□□□ 1.2
TRPM1-211ENST00000560658 PCDHB15Q9Y5E8 787 aa22.53■■□□□ 1.2
TRPM1-211ENST00000560658 KIF16BQ96L93 1317 aa22.53■■□□□ 1.2
TRPM1-211ENST00000560658 FYB1O15117 783 aa22.53■■□□□ 1.2
TRPM1-211ENST00000560658 IPO8O15397 1037 aaKnown RBP22.53■■□□□ 1.2
TRPM1-211ENST00000560658 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
TRPM1-211ENST00000560658 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
TRPM1-211ENST00000560658 RLBP1P12271 317 aa22.52■■□□□ 1.2
TRPM1-211ENST00000560658 ALDH1L2Q3SY69 923 aa22.52■■□□□ 1.2
TRPM1-211ENST00000560658 PRAM1Q96QH2 718 aa22.52■■□□□ 1.2
TRPM1-211ENST00000560658 PDZRN3Q9UPQ7 1066 aa22.52■■□□□ 1.2
TRPM1-211ENST00000560658 FCHSD2O94868 740 aa22.51■■□□□ 1.19
TRPM1-211ENST00000560658 CALD1Q05682 793 aaKnown RBP22.51■■□□□ 1.19
TRPM1-211ENST00000560658 KIF20BQ96Q89 1820 aa22.51■■□□□ 1.19
TRPM1-211ENST00000560658 U2SURPO15042 1029 aaKnown RBP22.49■■□□□ 1.19
TRPM1-211ENST00000560658 BRPF1P55201 1214 aaPredicted RBP22.49■■□□□ 1.19
TRPM1-211ENST00000560658 SMC4Q9NTJ3 1288 aa22.49■■□□□ 1.19
TRPM1-211ENST00000560658 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
TRPM1-211ENST00000560658 ILDR1Q86SU0 546 aaPredicted RBP22.49■■□□□ 1.19
TRPM1-211ENST00000560658 PPIP5K1Q6PFW1 1433 aa22.49■■□□□ 1.19
TRPM1-211ENST00000560658 MYO5BQ9ULV0 1848 aa22.49■■□□□ 1.19
TRPM1-211ENST00000560658 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
TRPM1-211ENST00000560658 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
TRPM1-211ENST00000560658 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
TRPM1-211ENST00000560658 STK26Q9P289 416 aa22.48■■□□□ 1.19
TRPM1-211ENST00000560658 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
TRPM1-211ENST00000560658 TBC1D32Q96NH3 1257 aa22.47■■□□□ 1.19
TRPM1-211ENST00000560658 SLC4A3P48751 1232 aa22.46■■□□□ 1.19
TRPM1-211ENST00000560658 CDK19Q9BWU1 502 aa22.46■■□□□ 1.19
TRPM1-211ENST00000560658 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.19
TRPM1-211ENST00000560658 SPATA31D1Q6ZQQ2 1576 aa22.45■■□□□ 1.18
TRPM1-211ENST00000560658 RIPK4P57078 832 aa22.44■■□□□ 1.18
TRPM1-211ENST00000560658 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRPM1-211ENST00000560658 BCL2L13Q9BXK5 485 aa22.43■■□□□ 1.18
TRPM1-211ENST00000560658 FAM135BQ49AJ0 1406 aa22.43■■□□□ 1.18
TRPM1-211ENST00000560658 TRIM27P14373 513 aa22.42■■□□□ 1.18
TRPM1-211ENST00000560658 SSH1Q8WYL5 1049 aa22.42■■□□□ 1.18
TRPM1-211ENST00000560658 SMC5Q8IY18 1101 aa22.42■■□□□ 1.18
TRPM1-211ENST00000560658 STAG3Q9UJ98 1225 aa22.42■■□□□ 1.18
TRPM1-211ENST00000560658 SIRT1Q96EB6 747 aa22.41■■□□□ 1.18
TRPM1-211ENST00000560658 A2ML1A8K2U0 1454 aa22.4■■□□□ 1.18
TRPM1-211ENST00000560658 EDC4Q6P2E9 1401 aaKnown RBP22.4■■□□□ 1.18
TRPM1-211ENST00000560658 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
TRPM1-211ENST00000560658 TSR2Q969E8 191 aaKnown RBP22.4■■□□□ 1.18
TRPM1-211ENST00000560658 AATKQ6ZMQ8 1374 aa22.39■■□□□ 1.18
TRPM1-211ENST00000560658 ARHGAP45Q92619 1136 aa22.39■■□□□ 1.18
TRPM1-211ENST00000560658 TNNQ9UQP3 1299 aa22.39■■□□□ 1.18
TRPM1-211ENST00000560658 RIMS2Q9UQ26 1411 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
TRPM1-211ENST00000560658 SEC24BO95487 1268 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 LMOD3Q0VAK6 560 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 CABP1Q9NZU7 370 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 LRRC7Q96NW7 1537 aa22.38■■□□□ 1.17
TRPM1-211ENST00000560658 CDK12Q9NYV4 1490 aaPredicted RBP22.37■■□□□ 1.17
TRPM1-211ENST00000560658 RSPH6AQ9H0K4 717 aa22.37■■□□□ 1.17
TRPM1-211ENST00000560658 ZBTB40Q9NUA8 1239 aa22.37■■□□□ 1.17
TRPM1-211ENST00000560658 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
TRPM1-211ENST00000560658 SETD1AO15047 1707 aaKnown RBP22.36■■□□□ 1.17
TRPM1-211ENST00000560658 CPSF1Q10570 1443 aaKnown RBP22.36■■□□□ 1.17
TRPM1-211ENST00000560658 NFE2L2Q16236 605 aa22.35■■□□□ 1.17
TRPM1-211ENST00000560658 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
TRPM1-211ENST00000560658 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
TRPM1-211ENST00000560658 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
TRPM1-211ENST00000560658 GNAI1P63096 354 aa22.34■■□□□ 1.17
TRPM1-211ENST00000560658 IFT57Q9NWB7 429 aa22.34■■□□□ 1.17
TRPM1-211ENST00000560658 POLKQ9UBT6 870 aa22.33■■□□□ 1.17
TRPM1-211ENST00000560658 KNDC1Q76NI1 1749 aa22.33■■□□□ 1.16
TRPM1-211ENST00000560658 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
TRPM1-211ENST00000560658 TECPR2O15040 1411 aa22.32■■□□□ 1.16
TRPM1-211ENST00000560658 PTCH1Q13635 1447 aa22.32■■□□□ 1.16
TRPM1-211ENST00000560658 TMEM57Q8N5G2 664 aa22.31■■□□□ 1.16
TRPM1-211ENST00000560658 ANTXR1Q9H6X2 564 aa22.31■■□□□ 1.16
TRPM1-211ENST00000560658 TSPOAP1O95153 1857 aa22.31■■□□□ 1.16
TRPM1-211ENST00000560658 KIF24Q5T7B8 1368 aa22.31■■□□□ 1.16
TRPM1-211ENST00000560658 PRKAR2BP31323 418 aa22.31■■□□□ 1.16
TRPM1-211ENST00000560658 HAP1P54257 671 aaPredicted RBP22.3■■□□□ 1.16
TRPM1-211ENST00000560658 NUCB1Q02818 461 aa22.3■■□□□ 1.16
TRPM1-211ENST00000560658 GCC1Q96CN9 775 aa22.3■■□□□ 1.16
TRPM1-211ENST00000560658 C22orf23Q9BZE7 217 aa22.3■■□□□ 1.16
TRPM1-211ENST00000560658 WASLO00401 505 aaPredicted RBP22.29■■□□□ 1.16
TRPM1-211ENST00000560658 CFAP44Q96MT7 982 aa22.29■■□□□ 1.16
TRPM1-211ENST00000560658 TBC1D2Q9BYX2 928 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms