RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 NRAPQ86VF7 1730 aa23.3■■□□□ 1.32
SPG21-211ENST00000560564 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
SPG21-211ENST00000560564 GJD4Q96KN9 370 aaPredicted RBP23.29■■□□□ 1.32
SPG21-211ENST00000560564 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
SPG21-211ENST00000560564 ACEP12821 1306 aa23.28■■□□□ 1.32
SPG21-211ENST00000560564 PHRF1Q9P1Y6 1649 aaKnown RBP23.27■■□□□ 1.32
SPG21-211ENST00000560564 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
SPG21-211ENST00000560564 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
SPG21-211ENST00000560564 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
SPG21-211ENST00000560564 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.31
SPG21-211ENST00000560564 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
SPG21-211ENST00000560564 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
SPG21-211ENST00000560564 CABP2Q9NPB3 220 aa23.24■■□□□ 1.31
SPG21-211ENST00000560564 PAK3O75914 559 aaPredicted RBP23.23■■□□□ 1.31
SPG21-211ENST00000560564 SRPK2P78362 688 aaKnown RBP23.23■■□□□ 1.31
SPG21-211ENST00000560564 VPS72Q15906 364 aa23.23■■□□□ 1.31
SPG21-211ENST00000560564 BRWD3Q6RI45 1802 aa23.23■■□□□ 1.31
SPG21-211ENST00000560564 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
SPG21-211ENST00000560564 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
SPG21-211ENST00000560564 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
SPG21-211ENST00000560564 SBNO2Q9Y2G9 1366 aa23.16■■□□□ 1.3
SPG21-211ENST00000560564 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
SPG21-211ENST00000560564 ONECUT3O60422 494 aaPredicted RBP23.16■■□□□ 1.3
SPG21-211ENST00000560564 BTG4Q9NY30 223 aa23.16■■□□□ 1.3
SPG21-211ENST00000560564 USP6P35125 1406 aa23.16■■□□□ 1.3
SPG21-211ENST00000560564 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
SPG21-211ENST00000560564 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
SPG21-211ENST00000560564 KIAA0232Q92628 1395 aa23.15■■□□□ 1.3
SPG21-211ENST00000560564 USP19O94966 1318 aa23.15■■□□□ 1.3
SPG21-211ENST00000560564 CABP1Q9NZU7 370 aa23.15■■□□□ 1.3
SPG21-211ENST00000560564 AKAP12Q02952 1782 aa23.14■■□□□ 1.3
SPG21-211ENST00000560564 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.29
SPG21-211ENST00000560564 PRDM11Q9NQV5 511 aa23.13■■□□□ 1.29
SPG21-211ENST00000560564 PIK3C2AO00443 1686 aa23.12■■□□□ 1.29
SPG21-211ENST00000560564 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
SPG21-211ENST00000560564 ABTB2Q8N961 1025 aa23.11■■□□□ 1.29
SPG21-211ENST00000560564 LMO7Q8WWI1 1683 aa23.11■■□□□ 1.29
SPG21-211ENST00000560564 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
SPG21-211ENST00000560564 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
SPG21-211ENST00000560564 CPDO75976 1380 aa23.09■■□□□ 1.29
SPG21-211ENST00000560564 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
SPG21-211ENST00000560564 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.29
SPG21-211ENST00000560564 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.29
SPG21-211ENST00000560564 SLIT3O75094 1523 aa23.08■■□□□ 1.29
SPG21-211ENST00000560564 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
SPG21-211ENST00000560564 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
SPG21-211ENST00000560564 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.28
SPG21-211ENST00000560564 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
SPG21-211ENST00000560564 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
SPG21-211ENST00000560564 NLRP13Q86W25 1043 aa23.06■■□□□ 1.28
SPG21-211ENST00000560564 FAM98CQ17RN3 349 aaKnown RBP23.04■■□□□ 1.28
SPG21-211ENST00000560564 GCP02774 474 aa23.03■■□□□ 1.28
SPG21-211ENST00000560564 SRCAPQ6ZRS2 3230 aa23.03■■□□□ 1.28
SPG21-211ENST00000560564 CCDC125Q86Z20 511 aa23.02■■□□□ 1.28
SPG21-211ENST00000560564 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
SPG21-211ENST00000560564 SPATA31A1Q5TZJ5 1347 aa23.02■■□□□ 1.28
SPG21-211ENST00000560564 BLMP54132 1417 aaPredicted RBP23.01■■□□□ 1.27
SPG21-211ENST00000560564 KRT27Q7Z3Y8 459 aa23.01■■□□□ 1.27
SPG21-211ENST00000560564 ZNF692Q9BU19 519 aaPredicted RBP23.01■■□□□ 1.27
SPG21-211ENST00000560564 TTC21BQ7Z4L5 1316 aa23.01■■□□□ 1.27
SPG21-211ENST00000560564 COL18A1P39060 1754 aa23.01■■□□□ 1.27
SPG21-211ENST00000560564 NLRP6P59044 892 aa23■■□□□ 1.27
SPG21-211ENST00000560564 USP54Q70EL1 1684 aa22.99■■□□□ 1.27
SPG21-211ENST00000560564 TESK2Q96S53 571 aa22.98■■□□□ 1.27
SPG21-211ENST00000560564 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
SPG21-211ENST00000560564 COL5A2P05997 1499 aaPredicted RBP22.98■■□□□ 1.27
SPG21-211ENST00000560564 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
SPG21-211ENST00000560564 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
SPG21-211ENST00000560564 AATKQ6ZMQ8 1374 aa22.95■■□□□ 1.26
SPG21-211ENST00000560564 NFAT5O94916 1531 aa22.94■■□□□ 1.26
SPG21-211ENST00000560564 A0A0G2JS52 829 aa22.94■■□□□ 1.26
SPG21-211ENST00000560564 MYT1Q01538 1121 aa22.94■■□□□ 1.26
SPG21-211ENST00000560564 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
SPG21-211ENST00000560564 PUS7Q96PZ0 661 aaKnown RBP22.94■■□□□ 1.26
SPG21-211ENST00000560564 ST20-MTHFSA0A0A6YYL1 179 aa22.93■■□□□ 1.26
SPG21-211ENST00000560564 BARGINQ6ZT62 677 aa22.92■■□□□ 1.26
SPG21-211ENST00000560564 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
SPG21-211ENST00000560564 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
SPG21-211ENST00000560564 SLC12A5Q9H2X9 1139 aa22.91■■□□□ 1.26
SPG21-211ENST00000560564 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
SPG21-211ENST00000560564 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
SPG21-211ENST00000560564 EVA1CP58658 441 aa22.9■■□□□ 1.26
SPG21-211ENST00000560564 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
SPG21-211ENST00000560564 PARP4Q9UKK3 1724 aaKnown RBP22.9■■□□□ 1.26
SPG21-211ENST00000560564 A0A1W2PP64 1363 aa22.89■■□□□ 1.26
SPG21-211ENST00000560564 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.26
SPG21-211ENST00000560564 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.25
SPG21-211ENST00000560564 FAM182BQ5T319 152 aa22.88■■□□□ 1.25
SPG21-211ENST00000560564 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
SPG21-211ENST00000560564 CRB1P82279 1406 aa22.88■■□□□ 1.25
SPG21-211ENST00000560564 EDC4Q6P2E9 1401 aaKnown RBP22.88■■□□□ 1.25
SPG21-211ENST00000560564 USP47Q96K76 1375 aa22.88■■□□□ 1.25
SPG21-211ENST00000560564 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 AXIN2Q9Y2T1 843 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 ABCC6O95255 1503 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 WNK3Q9BYP7 1800 aa22.87■■□□□ 1.25
SPG21-211ENST00000560564 TIMELESSQ9UNS1 1208 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms