RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 RSPH6AQ9H0K4 717 aa8.38□□□□□ -1.07
TMOD3-207ENST00000560549 SIAH2O43255 324 aa8.37□□□□□ -1.07
TMOD3-207ENST00000560549 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
TMOD3-207ENST00000560549 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
TMOD3-207ENST00000560549 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
TMOD3-207ENST00000560549 CTC1Q2NKJ3 1217 aa8.36□□□□□ -1.07
TMOD3-207ENST00000560549 MAP10Q9P2G4 905 aa8.36□□□□□ -1.07
TMOD3-207ENST00000560549 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
TMOD3-207ENST00000560549 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
TMOD3-207ENST00000560549 ST8SIA5O15466 376 aa8.35□□□□□ -1.07
TMOD3-207ENST00000560549 SH3BP2P78314 561 aa8.35□□□□□ -1.07
TMOD3-207ENST00000560549 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
TMOD3-207ENST00000560549 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
TMOD3-207ENST00000560549 TTC24A2A3L6 582 aaPredicted RBP8.34□□□□□ -1.07
TMOD3-207ENST00000560549 J3QL48 77 aa8.34□□□□□ -1.07
TMOD3-207ENST00000560549 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
TMOD3-207ENST00000560549 TSC1Q92574 1164 aa8.34□□□□□ -1.07
TMOD3-207ENST00000560549 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
TMOD3-207ENST00000560549 POTECB2RU33 542 aa8.32□□□□□ -1.08
TMOD3-207ENST00000560549 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
TMOD3-207ENST00000560549 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
TMOD3-207ENST00000560549 BAP1Q92560 729 aa8.32□□□□□ -1.08
TMOD3-207ENST00000560549 MPNDQ8N594 471 aa8.31□□□□□ -1.08
TMOD3-207ENST00000560549 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
TMOD3-207ENST00000560549 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
TMOD3-207ENST00000560549 AXIN1O15169 862 aa8.3□□□□□ -1.08
TMOD3-207ENST00000560549 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
TMOD3-207ENST00000560549 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
TMOD3-207ENST00000560549 CTHP32929 405 aa8.29□□□□□ -1.08
TMOD3-207ENST00000560549 HPS1Q92902 700 aa8.29□□□□□ -1.08
TMOD3-207ENST00000560549 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
TMOD3-207ENST00000560549 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
TMOD3-207ENST00000560549 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
TMOD3-207ENST00000560549 RFC5P40937 340 aa8.26□□□□□ -1.09
TMOD3-207ENST00000560549 HMX1Q9NP08 348 aaPredicted RBP8.26□□□□□ -1.09
TMOD3-207ENST00000560549 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
TMOD3-207ENST00000560549 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
TMOD3-207ENST00000560549 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
TMOD3-207ENST00000560549 FOXJ1Q92949 421 aa8.26□□□□□ -1.09
TMOD3-207ENST00000560549 ZNF775Q96BV0 537 aaPredicted RBP8.25□□□□□ -1.09
TMOD3-207ENST00000560549 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
TMOD3-207ENST00000560549 AP1G2O75843 785 aa8.24□□□□□ -1.09
TMOD3-207ENST00000560549 GMPR2Q9P2T1 348 aaKnown RBP8.24□□□□□ -1.09
TMOD3-207ENST00000560549 USP17L8P0C7I0 530 aa8.23□□□□□ -1.09
TMOD3-207ENST00000560549 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
TMOD3-207ENST00000560549 PCMTD1Q96MG8 357 aaPredicted RBP8.23□□□□□ -1.09
TMOD3-207ENST00000560549 CDK15Q96Q40 435 aa8.23□□□□□ -1.09
TMOD3-207ENST00000560549 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
TMOD3-207ENST00000560549 TLL2Q9Y6L7 1015 aa8.23□□□□□ -1.09
TMOD3-207ENST00000560549 NR6A1Q15406 480 aa8.22□□□□□ -1.09
TMOD3-207ENST00000560549 ARMC2Q8NEN0 867 aa8.22□□□□□ -1.09
TMOD3-207ENST00000560549 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
TMOD3-207ENST00000560549 SH3BP5LQ7L8J4 393 aa8.2□□□□□ -1.1
TMOD3-207ENST00000560549 FAM174AQ8TBP5 190 aa8.2□□□□□ -1.1
TMOD3-207ENST00000560549 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
TMOD3-207ENST00000560549 BPHLQ86WA6 291 aaPredicted RBP8.19□□□□□ -1.1
TMOD3-207ENST00000560549 GPKOWQ92917 476 aaPredicted RBP eCLIP8.19□□□□□ -1.1
TMOD3-207ENST00000560549 KLF16Q9BXK1 252 aaPredicted RBP8.19□□□□□ -1.1
TMOD3-207ENST00000560549 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
TMOD3-207ENST00000560549 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
TMOD3-207ENST00000560549 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
TMOD3-207ENST00000560549 TRIM47Q96LD4 638 aa8.19□□□□□ -1.1
TMOD3-207ENST00000560549 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
TMOD3-207ENST00000560549 C11orf95C9JLR9 678 aaPredicted RBP8.18□□□□□ -1.1
TMOD3-207ENST00000560549 ADH1CP00326 375 aa8.18□□□□□ -1.1
TMOD3-207ENST00000560549 NNTQ13423 1086 aa8.18□□□□□ -1.1
TMOD3-207ENST00000560549 TRMT44Q8IYL2 757 aaKnown RBP8.18□□□□□ -1.1
TMOD3-207ENST00000560549 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
TMOD3-207ENST00000560549 SENP2Q9HC62 589 aa8.17□□□□□ -1.1
TMOD3-207ENST00000560549 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
TMOD3-207ENST00000560549 GRM5P41594 1212 aa8.16□□□□□ -1.1
TMOD3-207ENST00000560549 TRIM46Q7Z4K8 759 aa8.16□□□□□ -1.1
TMOD3-207ENST00000560549 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
TMOD3-207ENST00000560549 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
TMOD3-207ENST00000560549 GPR37L1O60883 481 aa8.15□□□□□ -1.1
TMOD3-207ENST00000560549 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.1
TMOD3-207ENST00000560549 TIMP2P16035 220 aa8.15□□□□□ -1.1
TMOD3-207ENST00000560549 KIFC2Q96AC6 838 aa8.15□□□□□ -1.1
TMOD3-207ENST00000560549 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
TMOD3-207ENST00000560549 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
TMOD3-207ENST00000560549 NR3C2P08235 984 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 NR5A1Q13285 461 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 CARD14Q9BXL6 1004 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 MAGEB6P1A0A0J9YX57 407 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 AGERQ15109 404 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 MTMR14Q8NCE2 650 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 SNRKQ9NRH2 765 aa8.13□□□□□ -1.11
TMOD3-207ENST00000560549 BMP1P13497 986 aa8.12□□□□□ -1.11
TMOD3-207ENST00000560549 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
TMOD3-207ENST00000560549 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
TMOD3-207ENST00000560549 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
TMOD3-207ENST00000560549 WDR4P57081 412 aaKnown RBP8.11□□□□□ -1.11
TMOD3-207ENST00000560549 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
TMOD3-207ENST00000560549 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
TMOD3-207ENST00000560549 GPSM3Q9Y4H4 160 aa8.1□□□□□ -1.11
TMOD3-207ENST00000560549 CCDC180Q9P1Z9 1646 aa8.1□□□□□ -1.11
TMOD3-207ENST00000560549 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
TMOD3-207ENST00000560549 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
TMOD3-207ENST00000560549 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms