RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
HERC1-209ENST00000560519 PMFBP1Q8TBY8 1022 aa14.17□□□□□ -0.14
HERC1-209ENST00000560519 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
HERC1-209ENST00000560519 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
HERC1-209ENST00000560519 DISP2A7MBM2 1401 aa14.16□□□□□ -0.14
HERC1-209ENST00000560519 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
HERC1-209ENST00000560519 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
HERC1-209ENST00000560519 RREB1Q92766 1687 aa14.16□□□□□ -0.14
HERC1-209ENST00000560519 BTG4Q9NY30 223 aa14.15□□□□□ -0.14
HERC1-209ENST00000560519 FAM83GA6ND36 823 aa14.14□□□□□ -0.15
HERC1-209ENST00000560519 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
HERC1-209ENST00000560519 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
HERC1-209ENST00000560519 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
HERC1-209ENST00000560519 WASLO00401 505 aaPredicted RBP14.12□□□□□ -0.15
HERC1-209ENST00000560519 NGDNQ8NEJ9 315 aaKnown RBP14.12□□□□□ -0.15
HERC1-209ENST00000560519 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
HERC1-209ENST00000560519 SPATA31A5Q5VU36 1347 aa14.12□□□□□ -0.15
HERC1-209ENST00000560519 SPATA31A7Q8IWB4 1347 aa14.12□□□□□ -0.15
HERC1-209ENST00000560519 PRR36Q9H6K5 1346 aa14.12□□□□□ -0.15
HERC1-209ENST00000560519 RGPD3A6NKT7 1758 aaPredicted RBP14.11□□□□□ -0.15
HERC1-209ENST00000560519 RGPD4Q7Z3J3 1758 aa14.11□□□□□ -0.15
HERC1-209ENST00000560519 LMO7Q8WWI1 1683 aa14.11□□□□□ -0.15
HERC1-209ENST00000560519 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
HERC1-209ENST00000560519 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
HERC1-209ENST00000560519 PARP4Q9UKK3 1724 aaKnown RBP14.11□□□□□ -0.15
HERC1-209ENST00000560519 PARD3Q8TEW0 1356 aa14.1□□□□□ -0.15
HERC1-209ENST00000560519 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
HERC1-209ENST00000560519 WNK3Q9BYP7 1800 aa14.1□□□□□ -0.15
HERC1-209ENST00000560519 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
HERC1-209ENST00000560519 DCAF11Q8TEB1 546 aa14.09□□□□□ -0.15
HERC1-209ENST00000560519 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.16
HERC1-209ENST00000560519 KIAA0232Q92628 1395 aa14.08□□□□□ -0.16
HERC1-209ENST00000560519 SPATA31A1Q5TZJ5 1347 aa14.07□□□□□ -0.16
HERC1-209ENST00000560519 PSDA5PKW4 1024 aaPredicted RBP14.06□□□□□ -0.16
HERC1-209ENST00000560519 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
HERC1-209ENST00000560519 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
HERC1-209ENST00000560519 AKAP12Q02952 1782 aa14.05□□□□□ -0.16
HERC1-209ENST00000560519 HRCP23327 699 aa14.05□□□□□ -0.16
HERC1-209ENST00000560519 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
HERC1-209ENST00000560519 FAM196AQ6ZSG2 479 aa14.04□□□□□ -0.16
HERC1-209ENST00000560519 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
HERC1-209ENST00000560519 LRRC37A3O60309 1634 aa14.04□□□□□ -0.16
HERC1-209ENST00000560519 CPDO75976 1380 aa14.03□□□□□ -0.16
HERC1-209ENST00000560519 CAMTA1Q9Y6Y1 1673 aa14.02□□□□□ -0.16
HERC1-209ENST00000560519 BRD4O60885 1362 aaPredicted RBP14.02□□□□□ -0.17
HERC1-209ENST00000560519 STRN4Q9NRL3 753 aa14.02□□□□□ -0.17
HERC1-209ENST00000560519 SBF2Q86WG5 1849 aa14.01□□□□□ -0.17
HERC1-209ENST00000560519 ACEP12821 1306 aa14.01□□□□□ -0.17
HERC1-209ENST00000560519 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
HERC1-209ENST00000560519 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
HERC1-209ENST00000560519 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
HERC1-209ENST00000560519 SLIT3O75094 1523 aa14□□□□□ -0.17
HERC1-209ENST00000560519 COL5A2P05997 1499 aaPredicted RBP14□□□□□ -0.17
HERC1-209ENST00000560519 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
HERC1-209ENST00000560519 USP19O94966 1318 aa14□□□□□ -0.17
HERC1-209ENST00000560519 C11orf95C9JLR9 678 aaPredicted RBP14□□□□□ -0.17
HERC1-209ENST00000560519 EVA1CP58658 441 aa14□□□□□ -0.17
HERC1-209ENST00000560519 R3HDM1Q15032 1099 aaKnown RBP14□□□□□ -0.17
HERC1-209ENST00000560519 FAM182BQ5T319 152 aa14□□□□□ -0.17
HERC1-209ENST00000560519 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
HERC1-209ENST00000560519 PIK3C2AO00443 1686 aa14□□□□□ -0.17
HERC1-209ENST00000560519 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
HERC1-209ENST00000560519 PDE3BQ13370 1112 aa13.99□□□□□ -0.17
HERC1-209ENST00000560519 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
HERC1-209ENST00000560519 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
HERC1-209ENST00000560519 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 OVOS2A0A0J9YW53 1432 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 OVOS2Q6IE36 1432 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 TRIM37O94972 964 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 ZC3H6P61129 1189 aaKnown RBP13.98□□□□□ -0.17
HERC1-209ENST00000560519 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
HERC1-209ENST00000560519 ABTB2Q8N961 1025 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 CRB1P82279 1406 aa13.98□□□□□ -0.17
HERC1-209ENST00000560519 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
HERC1-209ENST00000560519 APBA3O96018 575 aa13.97□□□□□ -0.17
HERC1-209ENST00000560519 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
HERC1-209ENST00000560519 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
HERC1-209ENST00000560519 NBPF8Q3BBV2 869 aa13.96□□□□□ -0.17
HERC1-209ENST00000560519 TCP11L2Q8N4U5 519 aa13.96□□□□□ -0.17
HERC1-209ENST00000560519 CAMKK2Q96RR4 588 aa13.96□□□□□ -0.17
HERC1-209ENST00000560519 USP6P35125 1406 aa13.96□□□□□ -0.18
HERC1-209ENST00000560519 ABCC6O95255 1503 aa13.95□□□□□ -0.18
HERC1-209ENST00000560519 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
HERC1-209ENST00000560519 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
HERC1-209ENST00000560519 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
HERC1-209ENST00000560519 COL18A1P39060 1754 aa13.95□□□□□ -0.18
HERC1-209ENST00000560519 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
HERC1-209ENST00000560519 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
HERC1-209ENST00000560519 MON2Q7Z3U7 1717 aa13.94□□□□□ -0.18
HERC1-209ENST00000560519 LARP1Q6PKG0 1096 aaKnown RBP13.93□□□□□ -0.18
HERC1-209ENST00000560519 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
HERC1-209ENST00000560519 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
HERC1-209ENST00000560519 GCP02774 474 aa13.92□□□□□ -0.18
HERC1-209ENST00000560519 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
HERC1-209ENST00000560519 CPSF1Q10570 1443 aaKnown RBP13.91□□□□□ -0.18
HERC1-209ENST00000560519 NINLQ9Y2I6 1382 aa13.91□□□□□ -0.18
HERC1-209ENST00000560519 NHSQ6T4R5 1651 aa13.9□□□□□ -0.18
HERC1-209ENST00000560519 LTN1O94822 1766 aa13.89□□□□□ -0.19
HERC1-209ENST00000560519 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
HERC1-209ENST00000560519 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms