RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 NKTRP30414 1462 aaKnown RBP8.41□□□□□ -1.06
AP4E1-203ENST00000560508 NUP153P49790 1475 aaKnown RBP8.41□□□□□ -1.06
AP4E1-203ENST00000560508 KDM5BQ9UGL1 1544 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 HIP1O00291 1037 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 GNAI2P04899 355 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 MCTP1Q6DN14 999 aa8.41□□□□□ -1.06
AP4E1-203ENST00000560508 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.06
AP4E1-203ENST00000560508 BCAR3O75815 825 aa8.4□□□□□ -1.06
AP4E1-203ENST00000560508 TRDNQ13061 729 aa8.4□□□□□ -1.06
AP4E1-203ENST00000560508 NLRP2Q9NX02 1062 aa8.4□□□□□ -1.06
AP4E1-203ENST00000560508 DENND4BO75064 1496 aaPredicted RBP8.4□□□□□ -1.06
AP4E1-203ENST00000560508 PSMA5P28066 241 aa8.4□□□□□ -1.06
AP4E1-203ENST00000560508 MVPQ14764 893 aaKnown RBP8.4□□□□□ -1.06
AP4E1-203ENST00000560508 SHANK2Q9UPX8 1470 aa8.4□□□□□ -1.07
AP4E1-203ENST00000560508 TPM2P07951 284 aa8.4□□□□□ -1.07
AP4E1-203ENST00000560508 AIMP1Q12904 312 aaKnown RBP8.4□□□□□ -1.07
AP4E1-203ENST00000560508 MEX3CQ5U5Q3 659 aaKnown RBP8.4□□□□□ -1.07
AP4E1-203ENST00000560508 TSR2Q969E8 191 aaKnown RBP8.4□□□□□ -1.07
AP4E1-203ENST00000560508 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.07
AP4E1-203ENST00000560508 NSD2O96028 1365 aa8.4□□□□□ -1.07
AP4E1-203ENST00000560508 KIF6Q6ZMV9 814 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 HOOK1Q9UJC3 728 aaKnown RBP8.39□□□□□ -1.07
AP4E1-203ENST00000560508 ATP10BO94823 1461 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 MARCH6O60337 910 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 VPS37DQ86XT2 251 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 SYTL4Q96C24 671 aaPredicted RBP8.39□□□□□ -1.07
AP4E1-203ENST00000560508 ERICH2A1L162 156 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 FCHSD2O94868 740 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 APPP05067 770 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 CCDC184Q52MB2 194 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 NUP160Q12769 1436 aa8.39□□□□□ -1.07
AP4E1-203ENST00000560508 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
AP4E1-203ENST00000560508 FOXD4L6Q3SYB3 417 aaPredicted RBP8.39□□□□□ -1.07
AP4E1-203ENST00000560508 FOXD4L3Q6VB84 417 aaPredicted RBP8.39□□□□□ -1.07
AP4E1-203ENST00000560508 SAMD9Q5K651 1589 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 ATF7IPQ6VMQ6 1270 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 ABCC11Q96J66 1382 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 BECN2A8MW95 431 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 MCM2P49736 904 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 NOS1P29475 1434 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 ASXL1Q8IXJ9 1541 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 CPLX1O14810 134 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 NFXL1Q6ZNB6 911 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 PLCH2O75038 1416 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 CREBRFQ8IUR6 639 aa8.38□□□□□ -1.07
AP4E1-203ENST00000560508 NFE2L2Q16236 605 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
AP4E1-203ENST00000560508 WWC1Q8IX03 1113 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 TPM3P06753 285 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 NOC3LQ8WTT2 800 aaKnown RBP8.37□□□□□ -1.07
AP4E1-203ENST00000560508 MAST1Q9Y2H9 1570 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 SPG7Q9UQ90 795 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 DHX29Q7Z478 1369 aaKnown RBP8.37□□□□□ -1.07
AP4E1-203ENST00000560508 TPM1P09493 284 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 ANKLE2Q86XL3 938 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 CLASRPQ8N2M8 674 aaKnown RBP8.37□□□□□ -1.07
AP4E1-203ENST00000560508 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 RABEP1Q15276 862 aa8.37□□□□□ -1.07
AP4E1-203ENST00000560508 LETM1O95202 739 aaPredicted RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 SLC4A2P04920 1241 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 TSR1Q2NL82 804 aaKnown RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 VPS53Q5VIR6 699 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 WDR7Q9Y4E6 1490 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 TMPOP42166 694 aaKnown RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 BICD2Q8TD16 824 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 NEUROD6Q96NK8 337 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 CFAP74Q9C0B2 1584 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 LRRCC1Q9C099 1032 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 VPS37CA5D8V6 355 aaPredicted RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 SURF6O75683 361 aaKnown RBP8.36□□□□□ -1.07
AP4E1-203ENST00000560508 SASS6Q6UVJ0 657 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 PPP6R1Q9UPN7 881 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 MYO5CQ9NQX4 1742 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 PTPRKQ15262 1439 aa8.36□□□□□ -1.07
AP4E1-203ENST00000560508 CHD1LQ86WJ1 897 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 CCDC47Q96A33 483 aaKnown RBP8.35□□□□□ -1.07
AP4E1-203ENST00000560508 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
AP4E1-203ENST00000560508 GOLGA6L1Q8N7Z2 621 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 HDGFL1Q5TGJ6 251 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 BACH2Q9BYV9 841 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 ARHGEF12Q9NZN5 1544 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 ZNF518AQ6AHZ1 1483 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 IFT57Q9NWB7 429 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
AP4E1-203ENST00000560508 RALYLQ86SE5 291 aaKnown RBP8.35□□□□□ -1.07
AP4E1-203ENST00000560508 CABP4P57796 275 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
AP4E1-203ENST00000560508 TEX14Q8IWB6 1497 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
AP4E1-203ENST00000560508 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms