RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 NUTM2DQ5VT03 806 aaPredicted RBP10.28□□□□□ -0.76
TRIP4-209ENST00000560475 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
TRIP4-209ENST00000560475 TSC1Q92574 1164 aa10.28□□□□□ -0.76
TRIP4-209ENST00000560475 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
TRIP4-209ENST00000560475 PER1O15534 1290 aaPredicted RBP10.26□□□□□ -0.77
TRIP4-209ENST00000560475 ZNF511Q8NB15 262 aa10.26□□□□□ -0.77
TRIP4-209ENST00000560475 POLR3EQ9NVU0 708 aa10.26□□□□□ -0.77
TRIP4-209ENST00000560475 MAP10Q9P2G4 905 aa10.26□□□□□ -0.77
TRIP4-209ENST00000560475 LILRB3O75022 631 aa10.25□□□□□ -0.77
TRIP4-209ENST00000560475 ATP13A2Q9NQ11 1180 aa10.25□□□□□ -0.77
TRIP4-209ENST00000560475 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
TRIP4-209ENST00000560475 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
TRIP4-209ENST00000560475 F12P00748 615 aaPredicted RBP10.23□□□□□ -0.77
TRIP4-209ENST00000560475 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
TRIP4-209ENST00000560475 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
TRIP4-209ENST00000560475 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
TRIP4-209ENST00000560475 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
TRIP4-209ENST00000560475 TLL2Q9Y6L7 1015 aa10.22□□□□□ -0.77
TRIP4-209ENST00000560475 VARSP26640 1264 aaKnown RBP10.21□□□□□ -0.77
TRIP4-209ENST00000560475 FOXJ1Q92949 421 aa10.21□□□□□ -0.77
TRIP4-209ENST00000560475 SNRPBP14678 240 aaKnown RBP10.19□□□□□ -0.78
TRIP4-209ENST00000560475 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
TRIP4-209ENST00000560475 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
TRIP4-209ENST00000560475 CAPN5O15484 640 aaPredicted RBP10.17□□□□□ -0.78
TRIP4-209ENST00000560475 AGERQ15109 404 aa10.17□□□□□ -0.78
TRIP4-209ENST00000560475 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
TRIP4-209ENST00000560475 FAM117AQ9C073 453 aa10.17□□□□□ -0.78
TRIP4-209ENST00000560475 FAM174AQ8TBP5 190 aa10.16□□□□□ -0.78
TRIP4-209ENST00000560475 TRIM47Q96LD4 638 aa10.16□□□□□ -0.78
TRIP4-209ENST00000560475 SENP2Q9HC62 589 aa10.16□□□□□ -0.78
TRIP4-209ENST00000560475 BMP1P13497 986 aa10.15□□□□□ -0.78
TRIP4-209ENST00000560475 ARID5BQ14865 1188 aa10.15□□□□□ -0.78
TRIP4-209ENST00000560475 TREML4Q6UXN2 200 aa10.15□□□□□ -0.78
TRIP4-209ENST00000560475 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
TRIP4-209ENST00000560475 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
TRIP4-209ENST00000560475 NNTQ13423 1086 aa10.14□□□□□ -0.79
TRIP4-209ENST00000560475 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
TRIP4-209ENST00000560475 MPNDQ8N594 471 aa10.14□□□□□ -0.79
TRIP4-209ENST00000560475 PROCA1Q8NCQ7 364 aaPredicted RBP10.14□□□□□ -0.79
TRIP4-209ENST00000560475 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
TRIP4-209ENST00000560475 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
TRIP4-209ENST00000560475 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
TRIP4-209ENST00000560475 BPHLQ86WA6 291 aaPredicted RBP10.12□□□□□ -0.79
TRIP4-209ENST00000560475 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
TRIP4-209ENST00000560475 LCE2AQ5TA79 106 aaPredicted RBP10.11□□□□□ -0.79
TRIP4-209ENST00000560475 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
TRIP4-209ENST00000560475 KIFC2Q96AC6 838 aa10.11□□□□□ -0.79
TRIP4-209ENST00000560475 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
TRIP4-209ENST00000560475 ADH1CP00326 375 aa10.1□□□□□ -0.79
TRIP4-209ENST00000560475 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
TRIP4-209ENST00000560475 WFS1O76024 890 aa10.09□□□□□ -0.79
TRIP4-209ENST00000560475 WDR4P57081 412 aaKnown RBP10.09□□□□□ -0.79
TRIP4-209ENST00000560475 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
TRIP4-209ENST00000560475 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIP4-209ENST00000560475 MAGEB6P1A0A0J9YX57 407 aa10.07□□□□□ -0.8
TRIP4-209ENST00000560475 TIMP2P16035 220 aa10.07□□□□□ -0.8
TRIP4-209ENST00000560475 GRM5P41594 1212 aa10.07□□□□□ -0.8
TRIP4-209ENST00000560475 NFX1Q12986 1120 aaKnown RBP10.07□□□□□ -0.8
TRIP4-209ENST00000560475 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
TRIP4-209ENST00000560475 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
TRIP4-209ENST00000560475 KLF16Q9BXK1 252 aaPredicted RBP10.07□□□□□ -0.8
TRIP4-209ENST00000560475 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
TRIP4-209ENST00000560475 ZFP42Q96MM3 310 aa10.06□□□□□ -0.8
TRIP4-209ENST00000560475 NR3C2P08235 984 aa10.05□□□□□ -0.8
TRIP4-209ENST00000560475 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
TRIP4-209ENST00000560475 AP1G2O75843 785 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 NR5A1Q13285 461 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 NR6A1Q15406 480 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
TRIP4-209ENST00000560475 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
TRIP4-209ENST00000560475 ZIC2O95409 532 aaPredicted RBP10.03□□□□□ -0.8
TRIP4-209ENST00000560475 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
TRIP4-209ENST00000560475 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.81
TRIP4-209ENST00000560475 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
TRIP4-209ENST00000560475 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
TRIP4-209ENST00000560475 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
TRIP4-209ENST00000560475 FSHRP23945 695 aa10□□□□□ -0.81
TRIP4-209ENST00000560475 SCARF1Q14162 830 aa10□□□□□ -0.81
TRIP4-209ENST00000560475 LCE2CQ5TA81 110 aa10□□□□□ -0.81
TRIP4-209ENST00000560475 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
TRIP4-209ENST00000560475 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
TRIP4-209ENST00000560475 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
TRIP4-209ENST00000560475 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
TRIP4-209ENST00000560475 ARHGAP9Q9BRR9 750 aa9.99□□□□□ -0.81
TRIP4-209ENST00000560475 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
TRIP4-209ENST00000560475 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
TRIP4-209ENST00000560475 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
TRIP4-209ENST00000560475 MAP4K5Q9Y4K4 846 aa9.98□□□□□ -0.81
TRIP4-209ENST00000560475 SOBPA7XYQ1 873 aa9.97□□□□□ -0.81
TRIP4-209ENST00000560475 VEGFBP49765 207 aa9.97□□□□□ -0.81
TRIP4-209ENST00000560475 C6orf118Q5T5N4 469 aa9.97□□□□□ -0.81
TRIP4-209ENST00000560475 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
TRIP4-209ENST00000560475 RFC5P40937 340 aa9.96□□□□□ -0.82
TRIP4-209ENST00000560475 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
TRIP4-209ENST00000560475 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
TRIP4-209ENST00000560475 USP17L8P0C7I0 530 aa9.94□□□□□ -0.82
TRIP4-209ENST00000560475 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms