RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
IDH3A-219ENST00000560414 NGDNQ8NEJ9 315 aaKnown RBP21.09■□□□□ 0.97
IDH3A-219ENST00000560414 CABLES1Q8TDN4 633 aa21.09■□□□□ 0.97
IDH3A-219ENST00000560414 USP21Q9UK80 565 aa21.09■□□□□ 0.97
IDH3A-219ENST00000560414 CENPJQ9HC77 1338 aaPredicted RBP21.08■□□□□ 0.97
IDH3A-219ENST00000560414 NBPF8Q3BBV2 869 aa21.08■□□□□ 0.97
IDH3A-219ENST00000560414 FNBP4Q8N3X1 1017 aaPredicted RBP21.08■□□□□ 0.97
IDH3A-219ENST00000560414 ATP7BP35670 1465 aa21.07■□□□□ 0.96
IDH3A-219ENST00000560414 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
IDH3A-219ENST00000560414 TRPM1Q7Z4N2 1603 aa21.05■□□□□ 0.96
IDH3A-219ENST00000560414 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
IDH3A-219ENST00000560414 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
IDH3A-219ENST00000560414 ROCK2O75116 1388 aaKnown RBP21.05■□□□□ 0.96
IDH3A-219ENST00000560414 ARHGEF10O15013 1369 aa21.03■□□□□ 0.96
IDH3A-219ENST00000560414 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
IDH3A-219ENST00000560414 SRPK2P78362 688 aaKnown RBP21.02■□□□□ 0.96
IDH3A-219ENST00000560414 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
IDH3A-219ENST00000560414 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.96
IDH3A-219ENST00000560414 CCDC61Q9Y6R9 512 aa21.02■□□□□ 0.96
IDH3A-219ENST00000560414 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
IDH3A-219ENST00000560414 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
IDH3A-219ENST00000560414 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
IDH3A-219ENST00000560414 MARF1Q9Y4F3 1742 aaKnown RBP21.01■□□□□ 0.95
IDH3A-219ENST00000560414 ACEP12821 1306 aa21■□□□□ 0.95
IDH3A-219ENST00000560414 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
IDH3A-219ENST00000560414 ITSN1Q15811 1721 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 ATRNO75882 1429 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 SPDYE2BA6NHP3 402 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 SPDYE6P0CI01 402 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 SPDYE2Q495Y8 402 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 ZNF692Q9BU19 519 aaPredicted RBP20.99■□□□□ 0.95
IDH3A-219ENST00000560414 QRICH2Q9H0J4 1663 aa20.99■□□□□ 0.95
IDH3A-219ENST00000560414 RGS12O14924 1447 aa20.98■□□□□ 0.95
IDH3A-219ENST00000560414 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
IDH3A-219ENST00000560414 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
IDH3A-219ENST00000560414 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
IDH3A-219ENST00000560414 SLIT2O94813 1529 aa20.96■□□□□ 0.95
IDH3A-219ENST00000560414 UNC5CLQ8IV45 518 aa20.96■□□□□ 0.95
IDH3A-219ENST00000560414 TOPAZ1Q8N9V7 1692 aa20.96■□□□□ 0.95
IDH3A-219ENST00000560414 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
IDH3A-219ENST00000560414 PROM2Q8N271 834 aa20.95■□□□□ 0.94
IDH3A-219ENST00000560414 CARD11Q9BXL7 1154 aa20.95■□□□□ 0.94
IDH3A-219ENST00000560414 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
IDH3A-219ENST00000560414 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.94
IDH3A-219ENST00000560414 NUTM2GQ5VZR2 741 aa20.94■□□□□ 0.94
IDH3A-219ENST00000560414 GJD4Q96KN9 370 aaPredicted RBP20.93■□□□□ 0.94
IDH3A-219ENST00000560414 CABP1Q9NZU7 370 aa20.93■□□□□ 0.94
IDH3A-219ENST00000560414 EVC2Q86UK5 1308 aa20.93■□□□□ 0.94
IDH3A-219ENST00000560414 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
IDH3A-219ENST00000560414 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
IDH3A-219ENST00000560414 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.94
IDH3A-219ENST00000560414 ABTB2Q8N961 1025 aa20.88■□□□□ 0.93
IDH3A-219ENST00000560414 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.87■□□□□ 0.93
IDH3A-219ENST00000560414 BTG4Q9NY30 223 aa20.87■□□□□ 0.93
IDH3A-219ENST00000560414 CCDC9Q9Y3X0 531 aaKnown RBP20.87■□□□□ 0.93
IDH3A-219ENST00000560414 PLCH1Q4KWH8 1693 aa20.86■□□□□ 0.93
IDH3A-219ENST00000560414 VPS72Q15906 364 aa20.86■□□□□ 0.93
IDH3A-219ENST00000560414 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
IDH3A-219ENST00000560414 ZC3H6P61129 1189 aaKnown RBP20.85■□□□□ 0.93
IDH3A-219ENST00000560414 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
IDH3A-219ENST00000560414 GLI3P10071 1580 aa20.85■□□□□ 0.93
IDH3A-219ENST00000560414 SSUH2Q9Y2M2 353 aa20.84■□□□□ 0.93
IDH3A-219ENST00000560414 KIAA0232Q92628 1395 aa20.84■□□□□ 0.93
IDH3A-219ENST00000560414 CHRNA2Q15822 529 aa20.83■□□□□ 0.93
IDH3A-219ENST00000560414 NWD2Q9ULI1 1742 aa20.83■□□□□ 0.92
IDH3A-219ENST00000560414 USP6P35125 1406 aa20.82■□□□□ 0.92
IDH3A-219ENST00000560414 FBXO3Q9UK99 471 aa20.81■□□□□ 0.92
IDH3A-219ENST00000560414 COL14A1Q05707 1796 aaKnown RBP20.81■□□□□ 0.92
IDH3A-219ENST00000560414 SBNO2Q9Y2G9 1366 aa20.81■□□□□ 0.92
IDH3A-219ENST00000560414 PHRF1Q9P1Y6 1649 aaKnown RBP20.8■□□□□ 0.92
IDH3A-219ENST00000560414 NLRP13Q86W25 1043 aa20.8■□□□□ 0.92
IDH3A-219ENST00000560414 ATAD2Q6PL18 1390 aa20.8■□□□□ 0.92
IDH3A-219ENST00000560414 USP19O94966 1318 aa20.79■□□□□ 0.92
IDH3A-219ENST00000560414 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
IDH3A-219ENST00000560414 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
IDH3A-219ENST00000560414 SSH2Q76I76 1423 aa20.78■□□□□ 0.92
IDH3A-219ENST00000560414 NRAPQ86VF7 1730 aa20.78■□□□□ 0.92
IDH3A-219ENST00000560414 NLRP6P59044 892 aa20.78■□□□□ 0.92
IDH3A-219ENST00000560414 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
IDH3A-219ENST00000560414 GCP02774 474 aa20.77■□□□□ 0.92
IDH3A-219ENST00000560414 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
IDH3A-219ENST00000560414 NRKQ7Z2Y5 1582 aa20.76■□□□□ 0.91
IDH3A-219ENST00000560414 TTC21BQ7Z4L5 1316 aa20.76■□□□□ 0.91
IDH3A-219ENST00000560414 FAM98CQ17RN3 349 aaKnown RBP20.75■□□□□ 0.91
IDH3A-219ENST00000560414 TMC1Q8TDI8 760 aa20.75■□□□□ 0.91
IDH3A-219ENST00000560414 TESK2Q96S53 571 aa20.75■□□□□ 0.91
IDH3A-219ENST00000560414 STRN4Q9NRL3 753 aa20.75■□□□□ 0.91
IDH3A-219ENST00000560414 A0A0G2JS52 829 aa20.74■□□□□ 0.91
IDH3A-219ENST00000560414 MYT1Q01538 1121 aa20.74■□□□□ 0.91
IDH3A-219ENST00000560414 CPSF1Q10570 1443 aaKnown RBP20.74■□□□□ 0.91
IDH3A-219ENST00000560414 EP400Q96L91 3159 aa20.74■□□□□ 0.91
IDH3A-219ENST00000560414 SPATA31A5Q5VU36 1347 aa20.74■□□□□ 0.91
IDH3A-219ENST00000560414 SPATA31A7Q8IWB4 1347 aa20.74■□□□□ 0.91
IDH3A-219ENST00000560414 KTN1Q86UP2 1357 aaKnown RBP20.73■□□□□ 0.91
IDH3A-219ENST00000560414 SLC12A5Q9H2X9 1139 aa20.73■□□□□ 0.91
IDH3A-219ENST00000560414 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
IDH3A-219ENST00000560414 ZBTB7CA1YPR0 619 aa20.72■□□□□ 0.91
IDH3A-219ENST00000560414 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
IDH3A-219ENST00000560414 CPDO75976 1380 aa20.72■□□□□ 0.91
IDH3A-219ENST00000560414 BRWD3Q6RI45 1802 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms