RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ONECUT3O60422 494 aaPredicted RBP19.66■□□□□ 0.74
SMAD3-214ENST00000560402 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
SMAD3-214ENST00000560402 CCDC9Q9Y3X0 531 aaKnown RBP19.66■□□□□ 0.74
SMAD3-214ENST00000560402 FAM83GA6ND36 823 aa19.65■□□□□ 0.74
SMAD3-214ENST00000560402 PLEKHG5O94827 1062 aa19.65■□□□□ 0.74
SMAD3-214ENST00000560402 POLR3AO14802 1390 aaPredicted RBP19.65■□□□□ 0.74
SMAD3-214ENST00000560402 NUDT16Q96DE0 195 aaKnown RBP19.64■□□□□ 0.73
SMAD3-214ENST00000560402 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.73
SMAD3-214ENST00000560402 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
SMAD3-214ENST00000560402 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
SMAD3-214ENST00000560402 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
SMAD3-214ENST00000560402 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
SMAD3-214ENST00000560402 NRKQ7Z2Y5 1582 aa19.61■□□□□ 0.73
SMAD3-214ENST00000560402 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
SMAD3-214ENST00000560402 RGPD1P0DJD0 1748 aa19.61■□□□□ 0.73
SMAD3-214ENST00000560402 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
SMAD3-214ENST00000560402 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
SMAD3-214ENST00000560402 CCDC61Q9Y6R9 512 aa19.6■□□□□ 0.73
SMAD3-214ENST00000560402 TRPM1Q7Z4N2 1603 aa19.59■□□□□ 0.73
SMAD3-214ENST00000560402 PRDM11Q9NQV5 511 aa19.59■□□□□ 0.73
SMAD3-214ENST00000560402 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
SMAD3-214ENST00000560402 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
SMAD3-214ENST00000560402 A0A0G2JS52 829 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 MYT1Q01538 1121 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
SMAD3-214ENST00000560402 ACEP12821 1306 aa19.56■□□□□ 0.72
SMAD3-214ENST00000560402 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
SMAD3-214ENST00000560402 LMO7Q8WWI1 1683 aa19.56■□□□□ 0.72
SMAD3-214ENST00000560402 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
SMAD3-214ENST00000560402 PPIP5K1Q6PFW1 1433 aa19.55■□□□□ 0.72
SMAD3-214ENST00000560402 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
SMAD3-214ENST00000560402 TNS1Q9HBL0 1735 aaKnown RBP19.54■□□□□ 0.72
SMAD3-214ENST00000560402 USP19O94966 1318 aa19.53■□□□□ 0.72
SMAD3-214ENST00000560402 SRCAPQ6ZRS2 3230 aa19.52■□□□□ 0.72
SMAD3-214ENST00000560402 CPDO75976 1380 aa19.52■□□□□ 0.72
SMAD3-214ENST00000560402 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
SMAD3-214ENST00000560402 LRP5O75197 1615 aa19.51■□□□□ 0.71
SMAD3-214ENST00000560402 SPATA31A1Q5TZJ5 1347 aa19.51■□□□□ 0.71
SMAD3-214ENST00000560402 BAG6P46379 1132 aa19.5■□□□□ 0.71
SMAD3-214ENST00000560402 DEFB132Q7Z7B7 95 aa19.5■□□□□ 0.71
SMAD3-214ENST00000560402 DISP2A7MBM2 1401 aa19.5■□□□□ 0.71
SMAD3-214ENST00000560402 SSH2Q76I76 1423 aa19.5■□□□□ 0.71
SMAD3-214ENST00000560402 USP6P35125 1406 aa19.49■□□□□ 0.71
SMAD3-214ENST00000560402 ABTB2Q8N961 1025 aa19.48■□□□□ 0.71
SMAD3-214ENST00000560402 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
SMAD3-214ENST00000560402 SLIT3O75094 1523 aa19.47■□□□□ 0.71
SMAD3-214ENST00000560402 CAMTA1Q9Y6Y1 1673 aa19.47■□□□□ 0.71
SMAD3-214ENST00000560402 ZC3H6P61129 1189 aaKnown RBP19.47■□□□□ 0.71
SMAD3-214ENST00000560402 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
SMAD3-214ENST00000560402 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
SMAD3-214ENST00000560402 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
SMAD3-214ENST00000560402 PARP4Q9UKK3 1724 aaKnown RBP19.46■□□□□ 0.71
SMAD3-214ENST00000560402 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
SMAD3-214ENST00000560402 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
SMAD3-214ENST00000560402 PIK3C2AO00443 1686 aa19.46■□□□□ 0.71
SMAD3-214ENST00000560402 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
SMAD3-214ENST00000560402 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
SMAD3-214ENST00000560402 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
SMAD3-214ENST00000560402 BARGINQ6ZT62 677 aa19.44■□□□□ 0.7
SMAD3-214ENST00000560402 COL5A2P05997 1499 aaPredicted RBP19.43■□□□□ 0.7
SMAD3-214ENST00000560402 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
SMAD3-214ENST00000560402 GCP02774 474 aa19.41■□□□□ 0.7
SMAD3-214ENST00000560402 EVA1CP58658 441 aa19.41■□□□□ 0.7
SMAD3-214ENST00000560402 THRAP3Q9Y2W1 955 aaKnown RBP19.41■□□□□ 0.7
SMAD3-214ENST00000560402 RREB1Q92766 1687 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 FAM196AQ6ZSG2 479 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 SBNO2Q9Y2G9 1366 aa19.4■□□□□ 0.7
SMAD3-214ENST00000560402 TCP11L2Q8N4U5 519 aa19.39■□□□□ 0.69
SMAD3-214ENST00000560402 CRB1P82279 1406 aa19.39■□□□□ 0.69
SMAD3-214ENST00000560402 COL18A1P39060 1754 aa19.39■□□□□ 0.69
SMAD3-214ENST00000560402 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
SMAD3-214ENST00000560402 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
SMAD3-214ENST00000560402 USP54Q70EL1 1684 aa19.37■□□□□ 0.69
SMAD3-214ENST00000560402 LRRC37A3O60309 1634 aa19.37■□□□□ 0.69
SMAD3-214ENST00000560402 ABCC6O95255 1503 aa19.37■□□□□ 0.69
SMAD3-214ENST00000560402 FAM182BQ5T319 152 aa19.37■□□□□ 0.69
SMAD3-214ENST00000560402 LARP1Q6PKG0 1096 aaKnown RBP19.37■□□□□ 0.69
SMAD3-214ENST00000560402 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
SMAD3-214ENST00000560402 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
SMAD3-214ENST00000560402 NLRP6P59044 892 aa19.36■□□□□ 0.69
SMAD3-214ENST00000560402 EN1Q05925 392 aaPredicted RBP19.36■□□□□ 0.69
SMAD3-214ENST00000560402 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
SMAD3-214ENST00000560402 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
SMAD3-214ENST00000560402 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
SMAD3-214ENST00000560402 RGPD3A6NKT7 1758 aaPredicted RBP19.35■□□□□ 0.69
SMAD3-214ENST00000560402 RGPD4Q7Z3J3 1758 aa19.35■□□□□ 0.69
SMAD3-214ENST00000560402 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
SMAD3-214ENST00000560402 NUP188Q5SRE5 1749 aa19.34■□□□□ 0.69
SMAD3-214ENST00000560402 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
SMAD3-214ENST00000560402 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
SMAD3-214ENST00000560402 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
SMAD3-214ENST00000560402 NFAT5O94916 1531 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 TRIM37O94972 964 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 KCNH5Q8NCM2 988 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms