RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
SNRPA1-210ENST00000560383 BRWD3Q6RI45 1802 aa21.74■■□□□ 1.07
SNRPA1-210ENST00000560383 NGDNQ8NEJ9 315 aaKnown RBP21.74■■□□□ 1.07
SNRPA1-210ENST00000560383 NUDT16Q96DE0 195 aaKnown RBP21.73■■□□□ 1.07
SNRPA1-210ENST00000560383 CENPJQ9HC77 1338 aaPredicted RBP21.73■■□□□ 1.07
SNRPA1-210ENST00000560383 POLR3AO14802 1390 aaPredicted RBP21.73■■□□□ 1.07
SNRPA1-210ENST00000560383 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
SNRPA1-210ENST00000560383 ROCK2O75116 1388 aaKnown RBP21.72■■□□□ 1.07
SNRPA1-210ENST00000560383 CCDC125Q86Z20 511 aa21.71■■□□□ 1.07
SNRPA1-210ENST00000560383 QRICH2Q9H0J4 1663 aa21.71■■□□□ 1.07
SNRPA1-210ENST00000560383 FAM83GA6ND36 823 aa21.7■■□□□ 1.06
SNRPA1-210ENST00000560383 CDK19Q9BWU1 502 aa21.7■■□□□ 1.06
SNRPA1-210ENST00000560383 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
SNRPA1-210ENST00000560383 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
SNRPA1-210ENST00000560383 CCDC61Q9Y6R9 512 aa21.68■■□□□ 1.06
SNRPA1-210ENST00000560383 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
SNRPA1-210ENST00000560383 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
SNRPA1-210ENST00000560383 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
SNRPA1-210ENST00000560383 PAK3O75914 559 aaPredicted RBP21.66■■□□□ 1.06
SNRPA1-210ENST00000560383 BLMP54132 1417 aaPredicted RBP21.65■■□□□ 1.06
SNRPA1-210ENST00000560383 SRCAPQ6ZRS2 3230 aa21.65■■□□□ 1.06
SNRPA1-210ENST00000560383 ACEP12821 1306 aa21.64■■□□□ 1.05
SNRPA1-210ENST00000560383 SEPT12Q8IYM1 358 aa21.64■■□□□ 1.05
SNRPA1-210ENST00000560383 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
SNRPA1-210ENST00000560383 CCDC9Q9Y3X0 531 aaKnown RBP21.64■■□□□ 1.05
SNRPA1-210ENST00000560383 NRKQ7Z2Y5 1582 aa21.63■■□□□ 1.05
SNRPA1-210ENST00000560383 BRD4O60885 1362 aaPredicted RBP21.62■■□□□ 1.05
SNRPA1-210ENST00000560383 PPIP5K1Q6PFW1 1433 aa21.62■■□□□ 1.05
SNRPA1-210ENST00000560383 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
SNRPA1-210ENST00000560383 CARD11Q9BXL7 1154 aa21.6■■□□□ 1.05
SNRPA1-210ENST00000560383 PRDM11Q9NQV5 511 aa21.6■■□□□ 1.05
SNRPA1-210ENST00000560383 KIAA0232Q92628 1395 aa21.6■■□□□ 1.05
SNRPA1-210ENST00000560383 SBNO2Q9Y2G9 1366 aa21.6■■□□□ 1.05
SNRPA1-210ENST00000560383 SRPK2P78362 688 aaKnown RBP21.59■■□□□ 1.05
SNRPA1-210ENST00000560383 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
SNRPA1-210ENST00000560383 SPATA31A5Q5VU36 1347 aa21.58■■□□□ 1.05
SNRPA1-210ENST00000560383 SPATA31A7Q8IWB4 1347 aa21.58■■□□□ 1.05
SNRPA1-210ENST00000560383 KRT27Q7Z3Y8 459 aa21.58■■□□□ 1.05
SNRPA1-210ENST00000560383 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
SNRPA1-210ENST00000560383 USP19O94966 1318 aa21.57■■□□□ 1.04
SNRPA1-210ENST00000560383 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
SNRPA1-210ENST00000560383 LMO7Q8WWI1 1683 aa21.56■■□□□ 1.04
SNRPA1-210ENST00000560383 CPDO75976 1380 aa21.56■■□□□ 1.04
SNRPA1-210ENST00000560383 FAM98CQ17RN3 349 aaKnown RBP21.55■■□□□ 1.04
SNRPA1-210ENST00000560383 USP6P35125 1406 aa21.55■■□□□ 1.04
SNRPA1-210ENST00000560383 RGPD1P0DJD0 1748 aa21.53■■□□□ 1.04
SNRPA1-210ENST00000560383 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
SNRPA1-210ENST00000560383 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
SNRPA1-210ENST00000560383 A0A0G2JS52 829 aa21.52■■□□□ 1.04
SNRPA1-210ENST00000560383 MYT1Q01538 1121 aa21.52■■□□□ 1.04
SNRPA1-210ENST00000560383 SPATA31A1Q5TZJ5 1347 aa21.52■■□□□ 1.03
SNRPA1-210ENST00000560383 SF3B2Q13435 895 aaKnown RBP21.51■■□□□ 1.03
SNRPA1-210ENST00000560383 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
SNRPA1-210ENST00000560383 SLIT3O75094 1523 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 SSH2Q76I76 1423 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 ZC3H6P61129 1189 aaKnown RBP21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 NUTM2GQ5VZR2 741 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 PIK3C2AO00443 1686 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
SNRPA1-210ENST00000560383 TNS1Q9HBL0 1735 aaKnown RBP21.46■■□□□ 1.03
SNRPA1-210ENST00000560383 GCP02774 474 aa21.46■■□□□ 1.03
SNRPA1-210ENST00000560383 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 TESK2Q96S53 571 aa21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 DISP2A7MBM2 1401 aa21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 COL5A2P05997 1499 aaPredicted RBP21.45■■□□□ 1.02
SNRPA1-210ENST00000560383 BARGINQ6ZT62 677 aa21.44■■□□□ 1.02
SNRPA1-210ENST00000560383 MON2Q7Z3U7 1717 aa21.43■■□□□ 1.02
SNRPA1-210ENST00000560383 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
SNRPA1-210ENST00000560383 BAG6P46379 1132 aa21.43■■□□□ 1.02
SNRPA1-210ENST00000560383 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-210ENST00000560383 SLC24A1O60721 1099 aa21.42■■□□□ 1.02
SNRPA1-210ENST00000560383 CPSF1Q10570 1443 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-210ENST00000560383 ZNF692Q9BU19 519 aaPredicted RBP21.42■■□□□ 1.02
SNRPA1-210ENST00000560383 PARP4Q9UKK3 1724 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-210ENST00000560383 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
SNRPA1-210ENST00000560383 EVA1CP58658 441 aa21.41■■□□□ 1.02
SNRPA1-210ENST00000560383 NLRP6P59044 892 aa21.41■■□□□ 1.02
SNRPA1-210ENST00000560383 THRAP3Q9Y2W1 955 aaKnown RBP21.41■■□□□ 1.02
SNRPA1-210ENST00000560383 COL18A1P39060 1754 aa21.41■■□□□ 1.02
SNRPA1-210ENST00000560383 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
SNRPA1-210ENST00000560383 USP54Q70EL1 1684 aa21.39■■□□□ 1.01
SNRPA1-210ENST00000560383 CRB1P82279 1406 aa21.38■■□□□ 1.01
SNRPA1-210ENST00000560383 USP47Q96K76 1375 aa21.38■■□□□ 1.01
SNRPA1-210ENST00000560383 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-210ENST00000560383 TCP11L2Q8N4U5 519 aa21.38■■□□□ 1.01
SNRPA1-210ENST00000560383 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
SNRPA1-210ENST00000560383 WNK3Q9BYP7 1800 aa21.37■■□□□ 1.01
SNRPA1-210ENST00000560383 FAM196AQ6ZSG2 479 aa21.37■■□□□ 1.01
SNRPA1-210ENST00000560383 ABCC6O95255 1503 aa21.37■■□□□ 1.01
SNRPA1-210ENST00000560383 LRP5O75197 1615 aa21.37■■□□□ 1.01
SNRPA1-210ENST00000560383 FAM182BQ5T319 152 aa21.36■■□□□ 1.01
SNRPA1-210ENST00000560383 USP35Q9P2H5 1018 aa21.36■■□□□ 1.01
SNRPA1-210ENST00000560383 CD163L1Q9NR16 1453 aa21.35■■□□□ 1.01
SNRPA1-210ENST00000560383 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
SNRPA1-210ENST00000560383 NFAT5O94916 1531 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms