RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 GUCA2AQ02747 115 aa9.88□□□□□ -0.83
USP8-210ENST00000560379 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
USP8-210ENST00000560379 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
USP8-210ENST00000560379 IRF6O14896 467 aa9.87□□□□□ -0.83
USP8-210ENST00000560379 HOXA2O43364 376 aa9.87□□□□□ -0.83
USP8-210ENST00000560379 WFS1O76024 890 aa9.87□□□□□ -0.83
USP8-210ENST00000560379 HPS1Q92902 700 aa9.87□□□□□ -0.83
USP8-210ENST00000560379 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
USP8-210ENST00000560379 AMHR2Q16671 573 aa9.86□□□□□ -0.83
USP8-210ENST00000560379 PARP9Q8IXQ6 854 aa9.86□□□□□ -0.83
USP8-210ENST00000560379 CCDC82Q8N4S0 544 aa9.86□□□□□ -0.83
USP8-210ENST00000560379 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
USP8-210ENST00000560379 A6NJR5 290 aa9.84□□□□□ -0.83
USP8-210ENST00000560379 TRAK2O60296 914 aa9.84□□□□□ -0.83
USP8-210ENST00000560379 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
USP8-210ENST00000560379 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
USP8-210ENST00000560379 GOPCQ9HD26 462 aa9.83□□□□□ -0.84
USP8-210ENST00000560379 RC3H1Q5TC82 1133 aaKnown RBP9.82□□□□□ -0.84
USP8-210ENST00000560379 WIPF1O43516 503 aa9.81□□□□□ -0.84
USP8-210ENST00000560379 USP46P62068 366 aa9.81□□□□□ -0.84
USP8-210ENST00000560379 CCDC24Q8N4L8 307 aa9.81□□□□□ -0.84
USP8-210ENST00000560379 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
USP8-210ENST00000560379 PRDM2Q13029 1718 aa9.81□□□□□ -0.84
USP8-210ENST00000560379 JUNDP17535 347 aa9.8□□□□□ -0.84
USP8-210ENST00000560379 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
USP8-210ENST00000560379 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
USP8-210ENST00000560379 WNT7BP56706 349 aa9.79□□□□□ -0.84
USP8-210ENST00000560379 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
USP8-210ENST00000560379 SIAH2O43255 324 aa9.77□□□□□ -0.85
USP8-210ENST00000560379 EIF5BO60841 1220 aaKnown RBP9.77□□□□□ -0.85
USP8-210ENST00000560379 PCMTD1Q96MG8 357 aaPredicted RBP9.77□□□□□ -0.85
USP8-210ENST00000560379 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
USP8-210ENST00000560379 TERTO14746 1132 aaKnown RBP9.76□□□□□ -0.85
USP8-210ENST00000560379 TTLL12Q14166 644 aaPredicted RBP9.76□□□□□ -0.85
USP8-210ENST00000560379 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
USP8-210ENST00000560379 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
USP8-210ENST00000560379 CFTRP13569 1480 aa9.74□□□□□ -0.85
USP8-210ENST00000560379 ALDH1A1P00352 501 aa9.74□□□□□ -0.85
USP8-210ENST00000560379 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
USP8-210ENST00000560379 MCM6Q14566 821 aa9.73□□□□□ -0.85
USP8-210ENST00000560379 TRIM46Q7Z4K8 759 aa9.73□□□□□ -0.85
USP8-210ENST00000560379 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
USP8-210ENST00000560379 SENP2Q9HC62 589 aa9.73□□□□□ -0.85
USP8-210ENST00000560379 NESP48681 1621 aa9.73□□□□□ -0.85
USP8-210ENST00000560379 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
USP8-210ENST00000560379 CLCN1P35523 988 aa9.72□□□□□ -0.85
USP8-210ENST00000560379 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
USP8-210ENST00000560379 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
USP8-210ENST00000560379 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
USP8-210ENST00000560379 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.85
USP8-210ENST00000560379 MS4A1P11836 297 aa9.71□□□□□ -0.86
USP8-210ENST00000560379 BMP1P13497 986 aa9.71□□□□□ -0.86
USP8-210ENST00000560379 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.86
USP8-210ENST00000560379 STK17AQ9UEE5 414 aa9.71□□□□□ -0.86
USP8-210ENST00000560379 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
USP8-210ENST00000560379 SH3BP2P78314 561 aa9.7□□□□□ -0.86
USP8-210ENST00000560379 TRAIPQ9BWF2 469 aa9.7□□□□□ -0.86
USP8-210ENST00000560379 FDX1P10109 184 aa9.69□□□□□ -0.86
USP8-210ENST00000560379 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
USP8-210ENST00000560379 KCTD17Q8N5Z5 321 aa9.69□□□□□ -0.86
USP8-210ENST00000560379 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
USP8-210ENST00000560379 NDUFV2P19404 249 aa9.67□□□□□ -0.86
USP8-210ENST00000560379 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
USP8-210ENST00000560379 SH3D19Q5HYK7 790 aa9.67□□□□□ -0.86
USP8-210ENST00000560379 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
USP8-210ENST00000560379 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
USP8-210ENST00000560379 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
USP8-210ENST00000560379 CUX2O14529 1486 aa9.66□□□□□ -0.86
USP8-210ENST00000560379 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
USP8-210ENST00000560379 CCNYL3P0C7X3 344 aa9.66□□□□□ -0.86
USP8-210ENST00000560379 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
USP8-210ENST00000560379 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
USP8-210ENST00000560379 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
USP8-210ENST00000560379 TLL2Q9Y6L7 1015 aa9.66□□□□□ -0.86
USP8-210ENST00000560379 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
USP8-210ENST00000560379 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
USP8-210ENST00000560379 POM121Q96HA1 1249 aa9.65□□□□□ -0.86
USP8-210ENST00000560379 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
USP8-210ENST00000560379 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.87
USP8-210ENST00000560379 MOXD2PA6NHM9 499 aa9.64□□□□□ -0.87
USP8-210ENST00000560379 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
USP8-210ENST00000560379 WDR62O43379 1518 aa9.64□□□□□ -0.87
USP8-210ENST00000560379 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
USP8-210ENST00000560379 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
USP8-210ENST00000560379 RAD21O60216 631 aa9.63□□□□□ -0.87
USP8-210ENST00000560379 SSTR3P32745 418 aaPredicted RBP9.63□□□□□ -0.87
USP8-210ENST00000560379 PTPRNQ16849 979 aa9.63□□□□□ -0.87
USP8-210ENST00000560379 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
USP8-210ENST00000560379 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
USP8-210ENST00000560379 BAP1Q92560 729 aa9.62□□□□□ -0.87
USP8-210ENST00000560379 NXF1Q9UBU9 619 aaKnown RBP9.62□□□□□ -0.87
USP8-210ENST00000560379 GMPRP36959 345 aa9.61□□□□□ -0.87
USP8-210ENST00000560379 VEGFBP49765 207 aa9.61□□□□□ -0.87
USP8-210ENST00000560379 WASF2Q9Y6W5 498 aa9.61□□□□□ -0.87
USP8-210ENST00000560379 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
USP8-210ENST00000560379 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
USP8-210ENST00000560379 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
USP8-210ENST00000560379 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
USP8-210ENST00000560379 ZNF511Q8NB15 262 aa9.59□□□□□ -0.87
USP8-210ENST00000560379 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms