RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
PDE8A-212ENST00000560333 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
PDE8A-212ENST00000560333 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.11
PDE8A-212ENST00000560333 TNRQ92752 1358 aa15.76■□□□□ 0.11
PDE8A-212ENST00000560333 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
PDE8A-212ENST00000560333 PACS2Q86VP3 889 aa15.76■□□□□ 0.11
PDE8A-212ENST00000560333 ROBO1Q9Y6N7 1651 aa15.76■□□□□ 0.11
PDE8A-212ENST00000560333 SOWAHBA6NEL2 793 aa15.75■□□□□ 0.11
PDE8A-212ENST00000560333 BCAMP50895 628 aa15.75■□□□□ 0.11
PDE8A-212ENST00000560333 MED14O60244 1454 aa15.75■□□□□ 0.11
PDE8A-212ENST00000560333 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
PDE8A-212ENST00000560333 DEPDC5O75140 1603 aa15.75■□□□□ 0.11
PDE8A-212ENST00000560333 FAM98CQ17RN3 349 aaKnown RBP15.74■□□□□ 0.11
PDE8A-212ENST00000560333 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
PDE8A-212ENST00000560333 MEX3CQ5U5Q3 659 aaKnown RBP15.73■□□□□ 0.11
PDE8A-212ENST00000560333 SAMD9LQ8IVG5 1584 aa15.73■□□□□ 0.11
PDE8A-212ENST00000560333 SETBP1Q9Y6X0 1596 aa15.73■□□□□ 0.11
PDE8A-212ENST00000560333 XIRP1Q702N8 1843 aaKnown RBP15.72■□□□□ 0.11
PDE8A-212ENST00000560333 PREX2Q70Z35 1606 aa15.72■□□□□ 0.11
PDE8A-212ENST00000560333 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
PDE8A-212ENST00000560333 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
PDE8A-212ENST00000560333 TSKSQ9UJT2 592 aa15.71■□□□□ 0.11
PDE8A-212ENST00000560333 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
PDE8A-212ENST00000560333 FAM135AQ9P2D6 1515 aa15.7■□□□□ 0.1
PDE8A-212ENST00000560333 LRP6O75581 1613 aa15.7■□□□□ 0.1
PDE8A-212ENST00000560333 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
PDE8A-212ENST00000560333 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
PDE8A-212ENST00000560333 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
PDE8A-212ENST00000560333 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
PDE8A-212ENST00000560333 RXRBP28702 533 aa15.69■□□□□ 0.1
PDE8A-212ENST00000560333 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
PDE8A-212ENST00000560333 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
PDE8A-212ENST00000560333 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
PDE8A-212ENST00000560333 A2MP01023 1474 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 JCADQ9P266 1359 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 PRSS12P56730 875 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 NYAP1Q6ZVC0 841 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
PDE8A-212ENST00000560333 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
PDE8A-212ENST00000560333 TSHZ2Q9NRE2 1034 aa15.67■□□□□ 0.1
PDE8A-212ENST00000560333 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
PDE8A-212ENST00000560333 OSBPP22059 807 aa15.66■□□□□ 0.1
PDE8A-212ENST00000560333 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.66■□□□□ 0.1
PDE8A-212ENST00000560333 CDK11AQ9UQ88 783 aaPredicted RBP15.66■□□□□ 0.1
PDE8A-212ENST00000560333 SYCP2Q9BX26 1530 aa15.65■□□□□ 0.1
PDE8A-212ENST00000560333 ZC3H13Q5T200 1668 aaKnown RBP15.65■□□□□ 0.1
PDE8A-212ENST00000560333 LRCH3Q96II8 777 aa15.65■□□□□ 0.1
PDE8A-212ENST00000560333 WBP1LQ9NX94 342 aa15.65■□□□□ 0.1
PDE8A-212ENST00000560333 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
PDE8A-212ENST00000560333 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
PDE8A-212ENST00000560333 NUTM2BA6NNL0 878 aaPredicted RBP15.62■□□□□ 0.09
PDE8A-212ENST00000560333 NUTM2EB1AL46 878 aaPredicted RBP15.62■□□□□ 0.09
PDE8A-212ENST00000560333 NUTM2DQ5VT03 806 aaPredicted RBP15.62■□□□□ 0.09
PDE8A-212ENST00000560333 NUTM2AQ8IVF1 878 aaPredicted RBP15.62■□□□□ 0.09
PDE8A-212ENST00000560333 TSR3Q9UJK0 312 aaKnown RBP15.62■□□□□ 0.09
PDE8A-212ENST00000560333 PZPP20742 1482 aa15.62■□□□□ 0.09
PDE8A-212ENST00000560333 RGS12O14924 1447 aa15.61■□□□□ 0.09
PDE8A-212ENST00000560333 NLRP1Q9C000 1473 aa15.61■□□□□ 0.09
PDE8A-212ENST00000560333 INO80Q9ULG1 1556 aaPredicted RBP15.61■□□□□ 0.09
PDE8A-212ENST00000560333 EHBP1L1Q8N3D4 1523 aa15.6■□□□□ 0.09
PDE8A-212ENST00000560333 A0A0G2JS52 829 aa15.6■□□□□ 0.09
PDE8A-212ENST00000560333 RGS20O76081 388 aa15.6■□□□□ 0.09
PDE8A-212ENST00000560333 HPS5Q9UPZ3 1129 aa15.6■□□□□ 0.09
PDE8A-212ENST00000560333 ITGBL1O95965 494 aaPredicted RBP15.59■□□□□ 0.09
PDE8A-212ENST00000560333 FAM198AQ9UFP1 575 aa15.59■□□□□ 0.09
PDE8A-212ENST00000560333 TMEM94Q12767 1356 aa15.59■□□□□ 0.09
PDE8A-212ENST00000560333 SMAPO00193 183 aa15.58■□□□□ 0.08
PDE8A-212ENST00000560333 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
PDE8A-212ENST00000560333 MIA2Q96PC5 1412 aa15.58■□□□□ 0.08
PDE8A-212ENST00000560333 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
PDE8A-212ENST00000560333 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
PDE8A-212ENST00000560333 HNRNPMP52272 730 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDE8A-212ENST00000560333 TATDN2Q93075 761 aa15.57■□□□□ 0.08
PDE8A-212ENST00000560333 CDHR5Q9HBB8 845 aa15.57■□□□□ 0.08
PDE8A-212ENST00000560333 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
PDE8A-212ENST00000560333 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
PDE8A-212ENST00000560333 MTUS2Q5JR59 1369 aa15.55■□□□□ 0.08
PDE8A-212ENST00000560333 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
PDE8A-212ENST00000560333 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
PDE8A-212ENST00000560333 ADGBQ8N7X0 1667 aa15.54■□□□□ 0.08
PDE8A-212ENST00000560333 NCOA2Q15596 1464 aa15.54■□□□□ 0.08
PDE8A-212ENST00000560333 PPP4CP60510 307 aa15.54■□□□□ 0.08
PDE8A-212ENST00000560333 RBM27Q9P2N5 1060 aaKnown RBP15.54■□□□□ 0.08
PDE8A-212ENST00000560333 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
PDE8A-212ENST00000560333 SAMD7Q7Z3H4 446 aa15.53■□□□□ 0.08
PDE8A-212ENST00000560333 AFF2P51816 1311 aa15.52■□□□□ 0.08
PDE8A-212ENST00000560333 KCNC4Q03721 635 aa15.52■□□□□ 0.08
PDE8A-212ENST00000560333 C3orf80F5H4A9 247 aa15.51■□□□□ 0.07
PDE8A-212ENST00000560333 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
PDE8A-212ENST00000560333 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
PDE8A-212ENST00000560333 TRIM26Q12899 539 aaPredicted RBP15.5■□□□□ 0.07
PDE8A-212ENST00000560333 NUDT18Q6ZVK8 323 aa15.5■□□□□ 0.07
PDE8A-212ENST00000560333 KCNV2Q8TDN2 545 aa15.5■□□□□ 0.07
PDE8A-212ENST00000560333 HDGFP51858 240 aaKnown RBP15.49■□□□□ 0.07
PDE8A-212ENST00000560333 NPDC1Q9NQX5 325 aaPredicted RBP15.49■□□□□ 0.07
PDE8A-212ENST00000560333 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
PDE8A-212ENST00000560333 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
PDE8A-212ENST00000560333 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
PDE8A-212ENST00000560333 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms