RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
CRTC3-209ENST00000560320 PLEKHG3A1L390 1219 aa14.21□□□□□ -0.13
CRTC3-209ENST00000560320 PROSER2Q86WR7 435 aaPredicted RBP14.21□□□□□ -0.13
CRTC3-209ENST00000560320 CFAP53Q96M91 514 aa14.21□□□□□ -0.13
CRTC3-209ENST00000560320 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.13
CRTC3-209ENST00000560320 ADGRL3Q9HAR2 1447 aa14.21□□□□□ -0.13
CRTC3-209ENST00000560320 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
CRTC3-209ENST00000560320 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
CRTC3-209ENST00000560320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
CRTC3-209ENST00000560320 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
CRTC3-209ENST00000560320 INSRP06213 1382 aa14.19□□□□□ -0.14
CRTC3-209ENST00000560320 FYB1O15117 783 aa14.18□□□□□ -0.14
CRTC3-209ENST00000560320 TNNT2P45379 298 aaPredicted RBP14.18□□□□□ -0.14
CRTC3-209ENST00000560320 NGDNQ8NEJ9 315 aaKnown RBP14.18□□□□□ -0.14
CRTC3-209ENST00000560320 ACEP12821 1306 aa14.17□□□□□ -0.14
CRTC3-209ENST00000560320 POLR3AO14802 1390 aaPredicted RBP14.17□□□□□ -0.14
CRTC3-209ENST00000560320 MAP2P11137 1827 aaKnown RBP14.17□□□□□ -0.14
CRTC3-209ENST00000560320 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
CRTC3-209ENST00000560320 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
CRTC3-209ENST00000560320 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
CRTC3-209ENST00000560320 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
CRTC3-209ENST00000560320 COG3Q96JB2 828 aa14.15□□□□□ -0.14
CRTC3-209ENST00000560320 USP6P35125 1406 aa14.15□□□□□ -0.14
CRTC3-209ENST00000560320 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
CRTC3-209ENST00000560320 TTC21AQ8NDW8 1320 aa14.15□□□□□ -0.15
CRTC3-209ENST00000560320 PMFBP1Q8TBY8 1022 aa14.14□□□□□ -0.15
CRTC3-209ENST00000560320 PHLPP1O60346 1717 aa14.14□□□□□ -0.15
CRTC3-209ENST00000560320 LRP6O75581 1613 aa14.13□□□□□ -0.15
CRTC3-209ENST00000560320 MTHFSP49914 203 aa14.13□□□□□ -0.15
CRTC3-209ENST00000560320 TTC21BQ7Z4L5 1316 aa14.13□□□□□ -0.15
CRTC3-209ENST00000560320 JCADQ9P266 1359 aa14.12□□□□□ -0.15
CRTC3-209ENST00000560320 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
CRTC3-209ENST00000560320 NUDCQ9Y266 331 aa14.12□□□□□ -0.15
CRTC3-209ENST00000560320 BLMP54132 1417 aaPredicted RBP14.12□□□□□ -0.15
CRTC3-209ENST00000560320 KIF1AQ12756 1690 aa14.11□□□□□ -0.15
CRTC3-209ENST00000560320 ATF3P18847 181 aa14.11□□□□□ -0.15
CRTC3-209ENST00000560320 RXRBP28702 533 aa14.11□□□□□ -0.15
CRTC3-209ENST00000560320 NME9Q86XW9 330 aa14.11□□□□□ -0.15
CRTC3-209ENST00000560320 RBM33Q96EV2 1170 aaKnown RBP14.11□□□□□ -0.15
CRTC3-209ENST00000560320 C19orf44Q9H6X5 657 aa14.11□□□□□ -0.15
CRTC3-209ENST00000560320 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
CRTC3-209ENST00000560320 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
CRTC3-209ENST00000560320 DCCP43146 1447 aa14.09□□□□□ -0.15
CRTC3-209ENST00000560320 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
CRTC3-209ENST00000560320 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
CRTC3-209ENST00000560320 MSH6P52701 1360 aa14.09□□□□□ -0.15
CRTC3-209ENST00000560320 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
CRTC3-209ENST00000560320 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.16
CRTC3-209ENST00000560320 PSME1Q06323 249 aa14.07□□□□□ -0.16
CRTC3-209ENST00000560320 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
CRTC3-209ENST00000560320 COL16A1Q07092 1604 aaPredicted RBP14.07□□□□□ -0.16
CRTC3-209ENST00000560320 EP400Q96L91 3159 aa14.07□□□□□ -0.16
CRTC3-209ENST00000560320 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
CRTC3-209ENST00000560320 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
CRTC3-209ENST00000560320 PNNQ9H307 717 aaKnown RBP14.06□□□□□ -0.16
CRTC3-209ENST00000560320 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
CRTC3-209ENST00000560320 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
CRTC3-209ENST00000560320 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
CRTC3-209ENST00000560320 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
CRTC3-209ENST00000560320 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
CRTC3-209ENST00000560320 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
CRTC3-209ENST00000560320 MEX3CQ5U5Q3 659 aaKnown RBP14.05□□□□□ -0.16
CRTC3-209ENST00000560320 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
CRTC3-209ENST00000560320 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
CRTC3-209ENST00000560320 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
CRTC3-209ENST00000560320 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
CRTC3-209ENST00000560320 SPATA31A6Q5VVP1 1343 aa14.04□□□□□ -0.16
CRTC3-209ENST00000560320 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
CRTC3-209ENST00000560320 RGS12O14924 1447 aa14.04□□□□□ -0.16
CRTC3-209ENST00000560320 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
CRTC3-209ENST00000560320 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
CRTC3-209ENST00000560320 NLRP6P59044 892 aa14.03□□□□□ -0.16
CRTC3-209ENST00000560320 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
CRTC3-209ENST00000560320 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
CRTC3-209ENST00000560320 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.16
CRTC3-209ENST00000560320 NEFLP07196 543 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 NEFMP07197 916 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 RUNDC1Q96C34 613 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
CRTC3-209ENST00000560320 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
CRTC3-209ENST00000560320 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
CRTC3-209ENST00000560320 LRP5O75197 1615 aa14.01□□□□□ -0.17
CRTC3-209ENST00000560320 MST1RQ04912 1400 aa14□□□□□ -0.17
CRTC3-209ENST00000560320 ORAI2Q96SN7 254 aa14□□□□□ -0.17
CRTC3-209ENST00000560320 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
CRTC3-209ENST00000560320 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
CRTC3-209ENST00000560320 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
CRTC3-209ENST00000560320 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
CRTC3-209ENST00000560320 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
CRTC3-209ENST00000560320 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
CRTC3-209ENST00000560320 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
CRTC3-209ENST00000560320 APAF1O14727 1248 aa13.98□□□□□ -0.17
CRTC3-209ENST00000560320 FOXO3O43524 673 aa13.98□□□□□ -0.17
CRTC3-209ENST00000560320 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
CRTC3-209ENST00000560320 LTN1O94822 1766 aa13.97□□□□□ -0.17
CRTC3-209ENST00000560320 SOX12O15370 315 aa13.97□□□□□ -0.17
CRTC3-209ENST00000560320 FBLN1P23142 703 aa13.97□□□□□ -0.17
CRTC3-209ENST00000560320 AMPHP49418 695 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms