RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
HMBOX1-213ENST00000560269 PSME1Q06323 249 aa18.66■□□□□ 0.58
HMBOX1-213ENST00000560269 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
HMBOX1-213ENST00000560269 PXDNQ92626 1479 aa18.65■□□□□ 0.58
HMBOX1-213ENST00000560269 FYB1O15117 783 aa18.64■□□□□ 0.57
HMBOX1-213ENST00000560269 KRT28Q7Z3Y7 464 aa18.64■□□□□ 0.57
HMBOX1-213ENST00000560269 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
HMBOX1-213ENST00000560269 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
HMBOX1-213ENST00000560269 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
HMBOX1-213ENST00000560269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.573e-6■□□□□ 9.3
HMBOX1-213ENST00000560269 PIK3C2AO00443 1686 aa18.63■□□□□ 0.57
HMBOX1-213ENST00000560269 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
HMBOX1-213ENST00000560269 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
HMBOX1-213ENST00000560269 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 ANP32CO43423 234 aa18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
HMBOX1-213ENST00000560269 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
HMBOX1-213ENST00000560269 NME9Q86XW9 330 aa18.6■□□□□ 0.57
HMBOX1-213ENST00000560269 USP31Q70CQ4 1352 aa18.59■□□□□ 0.57
HMBOX1-213ENST00000560269 RALBP1Q15311 655 aa18.59■□□□□ 0.57
HMBOX1-213ENST00000560269 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
HMBOX1-213ENST00000560269 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
HMBOX1-213ENST00000560269 OVOS2A0A0J9YW53 1432 aa18.58■□□□□ 0.57
HMBOX1-213ENST00000560269 OVOS2Q6IE36 1432 aa18.58■□□□□ 0.57
HMBOX1-213ENST00000560269 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
HMBOX1-213ENST00000560269 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
HMBOX1-213ENST00000560269 SPATA31A3Q5VYP0 1347 aa18.56■□□□□ 0.56
HMBOX1-213ENST00000560269 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
HMBOX1-213ENST00000560269 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
HMBOX1-213ENST00000560269 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
HMBOX1-213ENST00000560269 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
HMBOX1-213ENST00000560269 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
HMBOX1-213ENST00000560269 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
HMBOX1-213ENST00000560269 COG3Q96JB2 828 aa18.55■□□□□ 0.56
HMBOX1-213ENST00000560269 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
HMBOX1-213ENST00000560269 COL16A1Q07092 1604 aaPredicted RBP18.54■□□□□ 0.56
HMBOX1-213ENST00000560269 MIER1Q8N108 512 aa18.54■□□□□ 0.56
HMBOX1-213ENST00000560269 NLRP6P59044 892 aa18.53■□□□□ 0.56
HMBOX1-213ENST00000560269 ARHGEF10O15013 1369 aa18.53■□□□□ 0.56
HMBOX1-213ENST00000560269 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.56
HMBOX1-213ENST00000560269 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
HMBOX1-213ENST00000560269 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
HMBOX1-213ENST00000560269 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
HMBOX1-213ENST00000560269 SLIT3O75094 1523 aa18.51■□□□□ 0.55
HMBOX1-213ENST00000560269 USP19O94966 1318 aa18.5■□□□□ 0.55
HMBOX1-213ENST00000560269 NUTM2GQ5VZR2 741 aa18.5■□□□□ 0.55
HMBOX1-213ENST00000560269 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-213ENST00000560269 AATKQ6ZMQ8 1374 aa18.5■□□□□ 0.55
HMBOX1-213ENST00000560269 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
HMBOX1-213ENST00000560269 COL22A1Q8NFW1 1626 aaPredicted RBP18.49■□□□□ 0.55
HMBOX1-213ENST00000560269 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
HMBOX1-213ENST00000560269 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
HMBOX1-213ENST00000560269 MAP2P11137 1827 aaKnown RBP18.47■□□□□ 0.55
HMBOX1-213ENST00000560269 NFAT5O94916 1531 aa18.47■□□□□ 0.55
HMBOX1-213ENST00000560269 ABCA3Q99758 1704 aa18.46■□□□□ 0.55
HMBOX1-213ENST00000560269 CCER2I3L3R5 266 aa18.46■□□□□ 0.55
HMBOX1-213ENST00000560269 TNNT2P45379 298 aaPredicted RBP18.46■□□□□ 0.55
HMBOX1-213ENST00000560269 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
HMBOX1-213ENST00000560269 SMG6Q86US8 1419 aaKnown RBP18.45■□□□□ 0.54
HMBOX1-213ENST00000560269 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
HMBOX1-213ENST00000560269 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
HMBOX1-213ENST00000560269 GCP02774 474 aa18.43■□□□□ 0.54
HMBOX1-213ENST00000560269 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
HMBOX1-213ENST00000560269 FBLN1P23142 703 aa18.42■□□□□ 0.54
HMBOX1-213ENST00000560269 LTN1O94822 1766 aa18.42■□□□□ 0.54
HMBOX1-213ENST00000560269 MTHFSP49914 203 aa18.41■□□□□ 0.54
HMBOX1-213ENST00000560269 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 INSRP06213 1382 aa18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
HMBOX1-213ENST00000560269 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.54
HMBOX1-213ENST00000560269 SOX12O15370 315 aa18.39■□□□□ 0.53
HMBOX1-213ENST00000560269 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
HMBOX1-213ENST00000560269 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
HMBOX1-213ENST00000560269 HSPA1LP34931 641 aa18.38■□□□□ 0.53
HMBOX1-213ENST00000560269 CPDO75976 1380 aa18.38■□□□□ 0.53
HMBOX1-213ENST00000560269 JCADQ9P266 1359 aa18.38■□□□□ 0.53
HMBOX1-213ENST00000560269 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
HMBOX1-213ENST00000560269 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
HMBOX1-213ENST00000560269 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
HMBOX1-213ENST00000560269 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
HMBOX1-213ENST00000560269 ABCC6O95255 1503 aa18.36■□□□□ 0.53
HMBOX1-213ENST00000560269 MRS2Q9HD23 443 aa18.36■□□□□ 0.53
HMBOX1-213ENST00000560269 COL18A1P39060 1754 aa18.35■□□□□ 0.53
HMBOX1-213ENST00000560269 FLT4P35916 1363 aa18.35■□□□□ 0.53
HMBOX1-213ENST00000560269 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
HMBOX1-213ENST00000560269 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
HMBOX1-213ENST00000560269 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
HMBOX1-213ENST00000560269 HOXC9P31274 260 aa18.33■□□□□ 0.52
HMBOX1-213ENST00000560269 AMPHP49418 695 aa18.33■□□□□ 0.52
HMBOX1-213ENST00000560269 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
HMBOX1-213ENST00000560269 IP6K1Q92551 441 aa18.33■□□□□ 0.52
HMBOX1-213ENST00000560269 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
HMBOX1-213ENST00000560269 HAP1P54257 671 aaPredicted RBP18.32■□□□□ 0.52
HMBOX1-213ENST00000560269 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms