RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
KNSTRN-209ENST00000560220 FAM161AQ3B820 660 aa15.64■□□□□ 0.09
KNSTRN-209ENST00000560220 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
KNSTRN-209ENST00000560220 KIF3CO14782 793 aa15.63■□□□□ 0.09
KNSTRN-209ENST00000560220 PLSCR1O15162 318 aa15.63■□□□□ 0.09
KNSTRN-209ENST00000560220 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
KNSTRN-209ENST00000560220 GOLGB1Q14789 3259 aaKnown RBP15.62■□□□□ 0.09
KNSTRN-209ENST00000560220 TNS2Q63HR2 1409 aa15.61■□□□□ 0.09
KNSTRN-209ENST00000560220 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
KNSTRN-209ENST00000560220 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
KNSTRN-209ENST00000560220 WDR90Q96KV7 1748 aa15.6■□□□□ 0.09
KNSTRN-209ENST00000560220 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
KNSTRN-209ENST00000560220 SLC15A2Q16348 729 aa15.59■□□□□ 0.09
KNSTRN-209ENST00000560220 ROBO2Q9HCK4 1378 aa15.59■□□□□ 0.09
KNSTRN-209ENST00000560220 RGPD3A6NKT7 1758 aaPredicted RBP15.59■□□□□ 0.09
KNSTRN-209ENST00000560220 RGPD4Q7Z3J3 1758 aa15.59■□□□□ 0.09
KNSTRN-209ENST00000560220 ABCA3Q99758 1704 aa15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 YBX3P16989 372 aaKnown RBP eCLIP15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 HTRA3P83110 453 aa15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 PSME1Q06323 249 aa15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
KNSTRN-209ENST00000560220 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
KNSTRN-209ENST00000560220 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
KNSTRN-209ENST00000560220 TOMM70O94826 608 aa15.56■□□□□ 0.08
KNSTRN-209ENST00000560220 ADCY9O60503 1353 aa15.56■□□□□ 0.08
KNSTRN-209ENST00000560220 HSPA1AP0DMV8 641 aaKnown RBP15.55■□□□□ 0.08
KNSTRN-209ENST00000560220 HSPA1BP0DMV9 641 aaKnown RBP15.55■□□□□ 0.08
KNSTRN-209ENST00000560220 NLGN2Q8NFZ4 835 aa15.54■□□□□ 0.08
KNSTRN-209ENST00000560220 C11orf95C9JLR9 678 aaPredicted RBP15.53■□□□□ 0.08
KNSTRN-209ENST00000560220 PROM2Q8N271 834 aa15.53■□□□□ 0.08
KNSTRN-209ENST00000560220 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
KNSTRN-209ENST00000560220 CDC42BPGQ6DT37 1551 aa15.53■□□□□ 0.08
KNSTRN-209ENST00000560220 ARHGEF10O15013 1369 aa15.52■□□□□ 0.08
KNSTRN-209ENST00000560220 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
KNSTRN-209ENST00000560220 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
KNSTRN-209ENST00000560220 PCNTO95613 3336 aa15.5■□□□□ 0.07
KNSTRN-209ENST00000560220 KIF1AQ12756 1690 aa15.49■□□□□ 0.07
KNSTRN-209ENST00000560220 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
KNSTRN-209ENST00000560220 IQGAP3Q86VI3 1631 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 POLD1P28340 1107 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 STRN4Q9NRL3 753 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 MYOM3Q5VTT5 1437 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
KNSTRN-209ENST00000560220 TECPR2O15040 1411 aa15.46■□□□□ 0.07
KNSTRN-209ENST00000560220 TXNRD1Q16881 649 aa15.46■□□□□ 0.07
KNSTRN-209ENST00000560220 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
KNSTRN-209ENST00000560220 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
KNSTRN-209ENST00000560220 NAIPQ13075 1403 aa15.43■□□□□ 0.06
KNSTRN-209ENST00000560220 PTF1AQ7RTS3 328 aa15.42■□□□□ 0.06
KNSTRN-209ENST00000560220 OVOS2A0A0G2JMS6 1433 aa15.42■□□□□ 0.06
KNSTRN-209ENST00000560220 OVOS2A0A0J9YW53 1432 aa15.42■□□□□ 0.06
KNSTRN-209ENST00000560220 OVOS2Q6IE36 1432 aa15.42■□□□□ 0.06
KNSTRN-209ENST00000560220 PHF8Q9UPP1 1060 aa15.41■□□□□ 0.06
KNSTRN-209ENST00000560220 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
KNSTRN-209ENST00000560220 EVA1CP58658 441 aa15.4■□□□□ 0.06
KNSTRN-209ENST00000560220 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
KNSTRN-209ENST00000560220 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
KNSTRN-209ENST00000560220 SBF2Q86WG5 1849 aa15.4■□□□□ 0.06
KNSTRN-209ENST00000560220 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
KNSTRN-209ENST00000560220 USP19O94966 1318 aa15.39■□□□□ 0.05
KNSTRN-209ENST00000560220 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
KNSTRN-209ENST00000560220 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
KNSTRN-209ENST00000560220 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
KNSTRN-209ENST00000560220 ANKRD30AQ9BXX3 1397 aa15.37■□□□□ 0.05
KNSTRN-209ENST00000560220 KIAA1210Q9ULL0 1709 aa15.37■□□□□ 0.05
KNSTRN-209ENST00000560220 FSTL1Q12841 308 aa15.36■□□□□ 0.05
KNSTRN-209ENST00000560220 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
KNSTRN-209ENST00000560220 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
KNSTRN-209ENST00000560220 PEAK1Q9H792 1746 aa15.35■□□□□ 0.05
KNSTRN-209ENST00000560220 CHRNA2Q15822 529 aa15.35■□□□□ 0.05
KNSTRN-209ENST00000560220 E9PCH4 1651 aa15.35■□□□□ 0.05
KNSTRN-209ENST00000560220 TOPAZ1Q8N9V7 1692 aa15.34■□□□□ 0.05
KNSTRN-209ENST00000560220 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
KNSTRN-209ENST00000560220 THRAP3Q9Y2W1 955 aaKnown RBP15.33■□□□□ 0.04
KNSTRN-209ENST00000560220 TULP4Q9NRJ4 1543 aa15.33■□□□□ 0.04
KNSTRN-209ENST00000560220 RGS19P49795 217 aa15.32■□□□□ 0.04
KNSTRN-209ENST00000560220 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 LARP1Q6PKG0 1096 aaKnown RBP15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 WAPLQ7Z5K2 1190 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 ABHD8Q96I13 439 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 NMRK2Q9NPI5 230 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 KIAA0232Q92628 1395 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 SSH2Q76I76 1423 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 NRXN1Q9ULB1 1477 aa15.31■□□□□ 0.04
KNSTRN-209ENST00000560220 RGPD8O14715 1765 aaPredicted RBP15.29■□□□□ 0.04
KNSTRN-209ENST00000560220 COL24A1Q17RW2 1714 aa15.29■□□□□ 0.04
KNSTRN-209ENST00000560220 ATP7BP35670 1465 aa15.29■□□□□ 0.04
KNSTRN-209ENST00000560220 DAPK1P53355 1430 aa15.29■□□□□ 0.04
KNSTRN-209ENST00000560220 DDB1Q16531 1140 aa15.27■□□□□ 0.04
KNSTRN-209ENST00000560220 ZNF827Q17R98 1081 aa15.27■□□□□ 0.04
KNSTRN-209ENST00000560220 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
KNSTRN-209ENST00000560220 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
KNSTRN-209ENST00000560220 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
KNSTRN-209ENST00000560220 FOXN1O15353 648 aa15.24■□□□□ 0.03
KNSTRN-209ENST00000560220 ALS2Q96Q42 1657 aa15.24■□□□□ 0.03
KNSTRN-209ENST00000560220 STK26Q9P289 416 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms