RNA–Protein interactions for RNA: ENST00000559948.5

PSMA4-216, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-216ENST00000559948 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
PSMA4-216ENST00000559948 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
PSMA4-216ENST00000559948 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
PSMA4-216ENST00000559948 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
PSMA4-216ENST00000559948 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
PSMA4-216ENST00000559948 BLMP54132 1417 aaPredicted RBP12.86□□□□□ -0.35
PSMA4-216ENST00000559948 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
PSMA4-216ENST00000559948 EIF3AQ14152 1382 aaKnown RBP12.85□□□□□ -0.35
PSMA4-216ENST00000559948 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
PSMA4-216ENST00000559948 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
PSMA4-216ENST00000559948 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
PSMA4-216ENST00000559948 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
PSMA4-216ENST00000559948 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
PSMA4-216ENST00000559948 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
PSMA4-216ENST00000559948 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
PSMA4-216ENST00000559948 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PSMA4-216ENST00000559948 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
PSMA4-216ENST00000559948 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
PSMA4-216ENST00000559948 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
PSMA4-216ENST00000559948 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
PSMA4-216ENST00000559948 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
PSMA4-216ENST00000559948 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
PSMA4-216ENST00000559948 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
PSMA4-216ENST00000559948 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
PSMA4-216ENST00000559948 ACEP12821 1306 aa12.81□□□□□ -0.36
PSMA4-216ENST00000559948 CHRNA2Q15822 529 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 KIAA0232Q92628 1395 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
PSMA4-216ENST00000559948 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
PSMA4-216ENST00000559948 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
PSMA4-216ENST00000559948 SPATA31A1Q5TZJ5 1347 aa12.78□□□□□ -0.36
PSMA4-216ENST00000559948 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
PSMA4-216ENST00000559948 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
PSMA4-216ENST00000559948 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.37
PSMA4-216ENST00000559948 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
PSMA4-216ENST00000559948 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
PSMA4-216ENST00000559948 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
PSMA4-216ENST00000559948 A0A0G2JS52 829 aa12.75□□□□□ -0.37
PSMA4-216ENST00000559948 MYT1Q01538 1121 aa12.75□□□□□ -0.37
PSMA4-216ENST00000559948 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 USP19O94966 1318 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-216ENST00000559948 GCP02774 474 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-216ENST00000559948 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 CABP1Q9NZU7 370 aa12.74□□□□□ -0.37
PSMA4-216ENST00000559948 CPDO75976 1380 aa12.73□□□□□ -0.37
PSMA4-216ENST00000559948 BAG6P46379 1132 aa12.73□□□□□ -0.37
PSMA4-216ENST00000559948 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
PSMA4-216ENST00000559948 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
PSMA4-216ENST00000559948 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
PSMA4-216ENST00000559948 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
PSMA4-216ENST00000559948 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
PSMA4-216ENST00000559948 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
PSMA4-216ENST00000559948 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 EVA1CP58658 441 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
PSMA4-216ENST00000559948 ITSN1Q15811 1721 aa12.71□□□□□ -0.38
PSMA4-216ENST00000559948 SSH2Q76I76 1423 aa12.71□□□□□ -0.38
PSMA4-216ENST00000559948 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
PSMA4-216ENST00000559948 TRIM37O94972 964 aa12.7□□□□□ -0.38
PSMA4-216ENST00000559948 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
PSMA4-216ENST00000559948 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
PSMA4-216ENST00000559948 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
PSMA4-216ENST00000559948 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
PSMA4-216ENST00000559948 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
PSMA4-216ENST00000559948 NLRP6P59044 892 aa12.67□□□□□ -0.38
PSMA4-216ENST00000559948 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
PSMA4-216ENST00000559948 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
PSMA4-216ENST00000559948 USP6P35125 1406 aa12.67□□□□□ -0.38
PSMA4-216ENST00000559948 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
PSMA4-216ENST00000559948 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
PSMA4-216ENST00000559948 APBA3O96018 575 aa12.66□□□□□ -0.38
PSMA4-216ENST00000559948 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
PSMA4-216ENST00000559948 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
PSMA4-216ENST00000559948 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
PSMA4-216ENST00000559948 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
PSMA4-216ENST00000559948 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
PSMA4-216ENST00000559948 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
PSMA4-216ENST00000559948 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
PSMA4-216ENST00000559948 ARHGEF25Q86VW2 580 aa12.64□□□□□ -0.39
PSMA4-216ENST00000559948 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
PSMA4-216ENST00000559948 CRB1P82279 1406 aa12.62□□□□□ -0.39
PSMA4-216ENST00000559948 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
PSMA4-216ENST00000559948 SLIT3O75094 1523 aa12.62□□□□□ -0.39
PSMA4-216ENST00000559948 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
PSMA4-216ENST00000559948 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
PSMA4-216ENST00000559948 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
PSMA4-216ENST00000559948 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
PSMA4-216ENST00000559948 LRP5O75197 1615 aa12.61□□□□□ -0.39
PSMA4-216ENST00000559948 TRPM1Q7Z4N2 1603 aa12.61□□□□□ -0.39
PSMA4-216ENST00000559948 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
PSMA4-216ENST00000559948 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms