RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 DISP2A7MBM2 1401 aa23.37■■□□□ 1.33
AC243562.3-201ENST00000559866 RREB1Q92766 1687 aa23.37■■□□□ 1.33
AC243562.3-201ENST00000559866 PRR36Q9H6K5 1346 aa23.36■■□□□ 1.33
AC243562.3-201ENST00000559866 R3HDM1Q15032 1099 aaKnown RBP23.36■■□□□ 1.33
AC243562.3-201ENST00000559866 TULP4Q9NRJ4 1543 aa23.35■■□□□ 1.33
AC243562.3-201ENST00000559866 NUP188Q5SRE5 1749 aa23.35■■□□□ 1.33
AC243562.3-201ENST00000559866 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
AC243562.3-201ENST00000559866 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
AC243562.3-201ENST00000559866 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
AC243562.3-201ENST00000559866 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
AC243562.3-201ENST00000559866 ACIN1Q9UKV3 1341 aaKnown RBP23.31■■□□□ 1.32
AC243562.3-201ENST00000559866 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
AC243562.3-201ENST00000559866 ARHGEF28Q8N1W1 1705 aaKnown RBP23.3■■□□□ 1.32
AC243562.3-201ENST00000559866 POGKQ9P215 609 aa23.28■■□□□ 1.32
AC243562.3-201ENST00000559866 MINK1Q8N4C8 1332 aaPredicted RBP23.28■■□□□ 1.32
AC243562.3-201ENST00000559866 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
AC243562.3-201ENST00000559866 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
AC243562.3-201ENST00000559866 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
AC243562.3-201ENST00000559866 ATP7BP35670 1465 aa23.24■■□□□ 1.31
AC243562.3-201ENST00000559866 CAMKK2Q96RR4 588 aa23.24■■□□□ 1.31
AC243562.3-201ENST00000559866 SPATA31A1Q5TZJ5 1347 aa23.24■■□□□ 1.31
AC243562.3-201ENST00000559866 KIAA0232Q92628 1395 aa23.24■■□□□ 1.31
AC243562.3-201ENST00000559866 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
AC243562.3-201ENST00000559866 TRIM37O94972 964 aa23.23■■□□□ 1.31
AC243562.3-201ENST00000559866 CHRNA2Q15822 529 aa23.22■■□□□ 1.31
AC243562.3-201ENST00000559866 PRDM11Q9NQV5 511 aa23.22■■□□□ 1.31
AC243562.3-201ENST00000559866 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
AC243562.3-201ENST00000559866 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
AC243562.3-201ENST00000559866 EIF3AQ14152 1382 aaKnown RBP23.19■■□□□ 1.3
AC243562.3-201ENST00000559866 WASLO00401 505 aaPredicted RBP23.19■■□□□ 1.3
AC243562.3-201ENST00000559866 CAMTA1Q9Y6Y1 1673 aa23.18■■□□□ 1.3
AC243562.3-201ENST00000559866 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
AC243562.3-201ENST00000559866 STRN4Q9NRL3 753 aa23.17■■□□□ 1.3
AC243562.3-201ENST00000559866 PARP4Q9UKK3 1724 aaKnown RBP23.16■■□□□ 1.3
AC243562.3-201ENST00000559866 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
AC243562.3-201ENST00000559866 APBA3O96018 575 aa23.15■■□□□ 1.3
AC243562.3-201ENST00000559866 ZC3H6P61129 1189 aaKnown RBP23.14■■□□□ 1.29
AC243562.3-201ENST00000559866 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.29
AC243562.3-201ENST00000559866 FAM196AQ6ZSG2 479 aa23.14■■□□□ 1.29
AC243562.3-201ENST00000559866 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.29
AC243562.3-201ENST00000559866 PEAK1Q9H792 1746 aa23.13■■□□□ 1.29
AC243562.3-201ENST00000559866 USP35Q9P2H5 1018 aa23.13■■□□□ 1.29
AC243562.3-201ENST00000559866 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
AC243562.3-201ENST00000559866 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
AC243562.3-201ENST00000559866 LRRC37A3O60309 1634 aa23.1■■□□□ 1.29
AC243562.3-201ENST00000559866 WNK3Q9BYP7 1800 aa23.1■■□□□ 1.29
AC243562.3-201ENST00000559866 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
AC243562.3-201ENST00000559866 LARP1Q6PKG0 1096 aaKnown RBP23.09■■□□□ 1.29
AC243562.3-201ENST00000559866 NUDT16Q96DE0 195 aaKnown RBP23.09■■□□□ 1.29
AC243562.3-201ENST00000559866 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
AC243562.3-201ENST00000559866 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
AC243562.3-201ENST00000559866 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
AC243562.3-201ENST00000559866 BARGINQ6ZT62 677 aa23.07■■□□□ 1.28
AC243562.3-201ENST00000559866 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
AC243562.3-201ENST00000559866 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
AC243562.3-201ENST00000559866 YY1P25490 414 aa23.06■■□□□ 1.28
AC243562.3-201ENST00000559866 ACEP12821 1306 aa23.04■■□□□ 1.28
AC243562.3-201ENST00000559866 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
AC243562.3-201ENST00000559866 PDE3BQ13370 1112 aa23.03■■□□□ 1.28
AC243562.3-201ENST00000559866 USP19O94966 1318 aa23.02■■□□□ 1.28
AC243562.3-201ENST00000559866 CPDO75976 1380 aa23.01■■□□□ 1.27
AC243562.3-201ENST00000559866 MYOM1P52179 1685 aa23.01■■□□□ 1.27
AC243562.3-201ENST00000559866 CDK19Q9BWU1 502 aa23.01■■□□□ 1.27
AC243562.3-201ENST00000559866 EVA1CP58658 441 aa23■■□□□ 1.27
AC243562.3-201ENST00000559866 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
AC243562.3-201ENST00000559866 TCP11L2Q8N4U5 519 aa23■■□□□ 1.27
AC243562.3-201ENST00000559866 KIAA1210Q9ULL0 1709 aa22.99■■□□□ 1.27
AC243562.3-201ENST00000559866 COL18A1P39060 1754 aa22.99■■□□□ 1.27
AC243562.3-201ENST00000559866 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
AC243562.3-201ENST00000559866 NBPF14Q5TI25 921 aa22.98■■□□□ 1.27
AC243562.3-201ENST00000559866 ANO8Q9HCE9 1232 aaPredicted RBP22.97■■□□□ 1.27
AC243562.3-201ENST00000559866 KCNQ2O43526 872 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 PTF1AQ7RTS3 328 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 SPON1Q9HCB6 807 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 PIK3C2AO00443 1686 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
AC243562.3-201ENST00000559866 OVOS2A0A0G2JMS6 1433 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 OVOS2A0A0J9YW53 1432 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 SLIT3O75094 1523 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 CRB1P82279 1406 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 OVOS2Q6IE36 1432 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 ABTB2Q8N961 1025 aa22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 PDGFDQ9GZP0 370 aaPredicted RBP22.95■■□□□ 1.26
AC243562.3-201ENST00000559866 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
AC243562.3-201ENST00000559866 PPP1R1BQ9UD71 204 aaPredicted RBP22.94■■□□□ 1.26
AC243562.3-201ENST00000559866 PPIP5K1Q6PFW1 1433 aa22.93■■□□□ 1.26
AC243562.3-201ENST00000559866 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
AC243562.3-201ENST00000559866 GCP02774 474 aa22.92■■□□□ 1.26
AC243562.3-201ENST00000559866 THRAP3Q9Y2W1 955 aaKnown RBP22.92■■□□□ 1.26
AC243562.3-201ENST00000559866 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
AC243562.3-201ENST00000559866 UTRNP46939 3433 aa22.87■■□□□ 1.25
AC243562.3-201ENST00000559866 PROM2Q8N271 834 aa22.86■■□□□ 1.25
AC243562.3-201ENST00000559866 USP6P35125 1406 aa22.85■■□□□ 1.25
AC243562.3-201ENST00000559866 PLSCR1O15162 318 aa22.85■■□□□ 1.25
AC243562.3-201ENST00000559866 NBPF1Q3BBV0 1214 aa22.85■■□□□ 1.25
AC243562.3-201ENST00000559866 NLRP13Q86W25 1043 aa22.85■■□□□ 1.25
AC243562.3-201ENST00000559866 STAC3Q96MF2 364 aa22.85■■□□□ 1.25
AC243562.3-201ENST00000559866 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms