RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 POLR3AO14802 1390 aaPredicted RBP27.44■■□□□ 1.98
CDC42BPB-206ENST00000559790 SRCAPQ6ZRS2 3230 aa27.44■■□□□ 1.98
CDC42BPB-206ENST00000559790 LMOD2Q6P5Q4 547 aa27.43■■□□□ 1.98
CDC42BPB-206ENST00000559790 LMO7Q8WWI1 1683 aa27.42■■□□□ 1.98
CDC42BPB-206ENST00000559790 NUDT16Q96DE0 195 aaKnown RBP27.41■■□□□ 1.98
CDC42BPB-206ENST00000559790 TNS1Q9HBL0 1735 aaKnown RBP27.39■■□□□ 1.98
CDC42BPB-206ENST00000559790 ONECUT3O60422 494 aaPredicted RBP27.39■■□□□ 1.98
CDC42BPB-206ENST00000559790 HAP1P54257 671 aaPredicted RBP27.39■■□□□ 1.98
CDC42BPB-206ENST00000559790 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
CDC42BPB-206ENST00000559790 BLMP54132 1417 aaPredicted RBP27.36■■□□□ 1.97
CDC42BPB-206ENST00000559790 SEPT12Q8IYM1 358 aa27.36■■□□□ 1.97
CDC42BPB-206ENST00000559790 AKAP12Q02952 1782 aa27.35■■□□□ 1.97
CDC42BPB-206ENST00000559790 RGPD1P0DJD0 1748 aa27.34■■□□□ 1.97
CDC42BPB-206ENST00000559790 NGDNQ8NEJ9 315 aaKnown RBP27.34■■□□□ 1.97
CDC42BPB-206ENST00000559790 PIK3C2AO00443 1686 aa27.33■■□□□ 1.97
CDC42BPB-206ENST00000559790 BTG4Q9NY30 223 aa27.32■■□□□ 1.96
CDC42BPB-206ENST00000559790 ACEP12821 1306 aa27.31■■□□□ 1.96
CDC42BPB-206ENST00000559790 KIAA0232Q92628 1395 aa27.31■■□□□ 1.96
CDC42BPB-206ENST00000559790 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
CDC42BPB-206ENST00000559790 CCDC125Q86Z20 511 aa27.29■■□□□ 1.96
CDC42BPB-206ENST00000559790 L3MBTL2Q969R5 705 aa27.29■■□□□ 1.96
CDC42BPB-206ENST00000559790 CAMTA1Q9Y6Y1 1673 aa27.29■■□□□ 1.96
CDC42BPB-206ENST00000559790 PPIP5K1Q6PFW1 1433 aa27.28■■□□□ 1.96
CDC42BPB-206ENST00000559790 SPATA31A5Q5VU36 1347 aa27.28■■□□□ 1.96
CDC42BPB-206ENST00000559790 SPATA31A7Q8IWB4 1347 aa27.28■■□□□ 1.96
CDC42BPB-206ENST00000559790 USP19O94966 1318 aa27.27■■□□□ 1.96
CDC42BPB-206ENST00000559790 CENPJQ9HC77 1338 aaPredicted RBP27.27■■□□□ 1.96
CDC42BPB-206ENST00000559790 PAK3O75914 559 aaPredicted RBP27.27■■□□□ 1.96
CDC42BPB-206ENST00000559790 CCDC61Q9Y6R9 512 aa27.27■■□□□ 1.96
CDC42BPB-206ENST00000559790 COL18A1P39060 1754 aa27.27■■□□□ 1.96
CDC42BPB-206ENST00000559790 WNK3Q9BYP7 1800 aa27.26■■□□□ 1.95
CDC42BPB-206ENST00000559790 NBPF8Q3BBV2 869 aa27.26■■□□□ 1.95
CDC42BPB-206ENST00000559790 SIN3AQ96ST3 1273 aa27.25■■□□□ 1.95
CDC42BPB-206ENST00000559790 SLIT3O75094 1523 aa27.25■■□□□ 1.95
CDC42BPB-206ENST00000559790 FAM98CQ17RN3 349 aaKnown RBP27.24■■□□□ 1.95
CDC42BPB-206ENST00000559790 KRT27Q7Z3Y8 459 aa27.24■■□□□ 1.95
CDC42BPB-206ENST00000559790 CCDC9Q9Y3X0 531 aaKnown RBP27.24■■□□□ 1.95
CDC42BPB-206ENST00000559790 DEFB132Q7Z7B7 95 aa27.23■■□□□ 1.95
CDC42BPB-206ENST00000559790 PRDM11Q9NQV5 511 aa27.23■■□□□ 1.95
CDC42BPB-206ENST00000559790 SSH2Q76I76 1423 aa27.23■■□□□ 1.95
CDC42BPB-206ENST00000559790 RGPD5Q99666 1765 aa27.22■■□□□ 1.95
CDC42BPB-206ENST00000559790 MON2Q7Z3U7 1717 aa27.22■■□□□ 1.95
CDC42BPB-206ENST00000559790 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
CDC42BPB-206ENST00000559790 PARP4Q9UKK3 1724 aaKnown RBP27.21■■□□□ 1.95
CDC42BPB-206ENST00000559790 CHRNA2Q15822 529 aa27.21■■□□□ 1.95
CDC42BPB-206ENST00000559790 USP6P35125 1406 aa27.21■■□□□ 1.95
CDC42BPB-206ENST00000559790 CPDO75976 1380 aa27.21■■□□□ 1.95
CDC42BPB-206ENST00000559790 SPATA31A1Q5TZJ5 1347 aa27.19■■□□□ 1.94
CDC42BPB-206ENST00000559790 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
CDC42BPB-206ENST00000559790 LRP5O75197 1615 aa27.18■■□□□ 1.94
CDC42BPB-206ENST00000559790 USP54Q70EL1 1684 aa27.17■■□□□ 1.94
CDC42BPB-206ENST00000559790 ZC3H6P61129 1189 aaKnown RBP27.16■■□□□ 1.94
CDC42BPB-206ENST00000559790 RREB1Q92766 1687 aa27.16■■□□□ 1.94
CDC42BPB-206ENST00000559790 PEAK1Q9H792 1746 aa27.15■■□□□ 1.94
CDC42BPB-206ENST00000559790 COL5A2P05997 1499 aaPredicted RBP27.14■■□□□ 1.94
CDC42BPB-206ENST00000559790 SRPK2P78362 688 aaKnown RBP27.14■■□□□ 1.94
CDC42BPB-206ENST00000559790 FAM182BQ5T319 152 aa27.14■■□□□ 1.94
CDC42BPB-206ENST00000559790 ZRANB1Q9UGI0 708 aa27.14■■□□□ 1.94
CDC42BPB-206ENST00000559790 DISP2A7MBM2 1401 aa27.14■■□□□ 1.93
CDC42BPB-206ENST00000559790 SBF2Q86WG5 1849 aa27.13■■□□□ 1.93
CDC42BPB-206ENST00000559790 LRRC37A3O60309 1634 aa27.13■■□□□ 1.93
CDC42BPB-206ENST00000559790 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
CDC42BPB-206ENST00000559790 ABTB2Q8N961 1025 aa27.11■■□□□ 1.93
CDC42BPB-206ENST00000559790 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
CDC42BPB-206ENST00000559790 NUP188Q5SRE5 1749 aa27.1■■□□□ 1.93
CDC42BPB-206ENST00000559790 A0A0G2JS52 829 aa27.09■■□□□ 1.93
CDC42BPB-206ENST00000559790 MYT1Q01538 1121 aa27.09■■□□□ 1.93
CDC42BPB-206ENST00000559790 CABP1Q9NZU7 370 aa27.09■■□□□ 1.93
CDC42BPB-206ENST00000559790 NFAT5O94916 1531 aa27.08■■□□□ 1.93
CDC42BPB-206ENST00000559790 STRN4Q9NRL3 753 aa27.08■■□□□ 1.93
CDC42BPB-206ENST00000559790 CPSF1Q10570 1443 aaKnown RBP27.07■■□□□ 1.92
CDC42BPB-206ENST00000559790 SBNO2Q9Y2G9 1366 aa27.06■■□□□ 1.92
CDC42BPB-206ENST00000559790 GCP02774 474 aa27.05■■□□□ 1.92
CDC42BPB-206ENST00000559790 NEUROD1Q13562 356 aa27.05■■□□□ 1.92
CDC42BPB-206ENST00000559790 LARP1Q6PKG0 1096 aaKnown RBP27.05■■□□□ 1.92
CDC42BPB-206ENST00000559790 CD163L1Q9NR16 1453 aa27.05■■□□□ 1.92
CDC42BPB-206ENST00000559790 LTN1O94822 1766 aa27.03■■□□□ 1.92
CDC42BPB-206ENST00000559790 BARGINQ6ZT62 677 aa27.03■■□□□ 1.92
CDC42BPB-206ENST00000559790 EVC2Q86UK5 1308 aa27.03■■□□□ 1.92
CDC42BPB-206ENST00000559790 NLRP13Q86W25 1043 aa27.03■■□□□ 1.92
CDC42BPB-206ENST00000559790 SF3B2Q13435 895 aaKnown RBP27.01■■□□□ 1.91
CDC42BPB-206ENST00000559790 RGPD3A6NKT7 1758 aaPredicted RBP27.01■■□□□ 1.91
CDC42BPB-206ENST00000559790 RGPD4Q7Z3J3 1758 aa27.01■■□□□ 1.91
CDC42BPB-206ENST00000559790 AATKQ6ZMQ8 1374 aa27■■□□□ 1.91
CDC42BPB-206ENST00000559790 CRB1P82279 1406 aa26.99■■□□□ 1.91
CDC42BPB-206ENST00000559790 BAG6P46379 1132 aa26.98■■□□□ 1.91
CDC42BPB-206ENST00000559790 USP35Q9P2H5 1018 aa26.98■■□□□ 1.91
CDC42BPB-206ENST00000559790 EN1Q05925 392 aaPredicted RBP26.97■■□□□ 1.91
CDC42BPB-206ENST00000559790 ABCC6O95255 1503 aa26.96■■□□□ 1.91
CDC42BPB-206ENST00000559790 TTC21BQ7Z4L5 1316 aa26.95■■□□□ 1.91
CDC42BPB-206ENST00000559790 NLRP6P59044 892 aa26.95■■□□□ 1.9
CDC42BPB-206ENST00000559790 TCP11L2Q8N4U5 519 aa26.95■■□□□ 1.9
CDC42BPB-206ENST00000559790 AXIN2Q9Y2T1 843 aa26.92■■□□□ 1.9
CDC42BPB-206ENST00000559790 PSDA5PKW4 1024 aaPredicted RBP26.91■■□□□ 1.9
CDC42BPB-206ENST00000559790 TRIM37O94972 964 aa26.91■■□□□ 1.9
CDC42BPB-206ENST00000559790 EVA1CP58658 441 aa26.91■■□□□ 1.9
CDC42BPB-206ENST00000559790 CAMKK2Q96RR4 588 aa26.91■■□□□ 1.9
CDC42BPB-206ENST00000559790 FAM196AQ6ZSG2 479 aa26.9■■□□□ 1.9
CDC42BPB-206ENST00000559790 EZH2Q15910 746 aaKnown RBP26.89■■□□□ 1.9
CDC42BPB-206ENST00000559790 THRAP3Q9Y2W1 955 aaKnown RBP26.89■■□□□ 1.9
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