RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
CERNA1-201ENST00000559779 CCDC9Q9Y3X0 531 aaKnown RBP23.27■■□□□ 1.32
CERNA1-201ENST00000559779 PLCH1Q4KWH8 1693 aa23.27■■□□□ 1.32
CERNA1-201ENST00000559779 TOPAZ1Q8N9V7 1692 aa23.27■■□□□ 1.32
CERNA1-201ENST00000559779 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
CERNA1-201ENST00000559779 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
CERNA1-201ENST00000559779 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
CERNA1-201ENST00000559779 PLEKHG3A1L390 1219 aa23.25■■□□□ 1.31
CERNA1-201ENST00000559779 POLR3AO14802 1390 aaPredicted RBP23.25■■□□□ 1.31
CERNA1-201ENST00000559779 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
CERNA1-201ENST00000559779 NWD2Q9ULI1 1742 aa23.24■■□□□ 1.31
CERNA1-201ENST00000559779 PPIP5K1Q6PFW1 1433 aa23.24■■□□□ 1.31
CERNA1-201ENST00000559779 VPS72Q15906 364 aa23.23■■□□□ 1.31
CERNA1-201ENST00000559779 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
CERNA1-201ENST00000559779 GLI3P10071 1580 aa23.23■■□□□ 1.31
CERNA1-201ENST00000559779 BTG4Q9NY30 223 aa23.22■■□□□ 1.31
CERNA1-201ENST00000559779 EVC2Q86UK5 1308 aa23.2■■□□□ 1.3
CERNA1-201ENST00000559779 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
CERNA1-201ENST00000559779 PRDM11Q9NQV5 511 aa23.19■■□□□ 1.3
CERNA1-201ENST00000559779 COL14A1Q05707 1796 aaKnown RBP23.19■■□□□ 1.3
CERNA1-201ENST00000559779 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
CERNA1-201ENST00000559779 CABP1Q9NZU7 370 aa23.18■■□□□ 1.3
CERNA1-201ENST00000559779 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
CERNA1-201ENST00000559779 CARD11Q9BXL7 1154 aa23.16■■□□□ 1.3
CERNA1-201ENST00000559779 A0A0G2JS52 829 aa23.15■■□□□ 1.3
CERNA1-201ENST00000559779 ZC3H6P61129 1189 aaKnown RBP23.15■■□□□ 1.3
CERNA1-201ENST00000559779 MYT1Q01538 1121 aa23.15■■□□□ 1.3
CERNA1-201ENST00000559779 KIAA0232Q92628 1395 aa23.14■■□□□ 1.3
CERNA1-201ENST00000559779 NRAPQ86VF7 1730 aa23.14■■□□□ 1.3
CERNA1-201ENST00000559779 PHRF1Q9P1Y6 1649 aaKnown RBP23.14■■□□□ 1.29
CERNA1-201ENST00000559779 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
CERNA1-201ENST00000559779 NLRP13Q86W25 1043 aa23.11■■□□□ 1.29
CERNA1-201ENST00000559779 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
CERNA1-201ENST00000559779 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
CERNA1-201ENST00000559779 FAM98CQ17RN3 349 aaKnown RBP23.1■■□□□ 1.29
CERNA1-201ENST00000559779 USP6P35125 1406 aa23.09■■□□□ 1.29
CERNA1-201ENST00000559779 STRN4Q9NRL3 753 aa23.09■■□□□ 1.29
CERNA1-201ENST00000559779 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
CERNA1-201ENST00000559779 CCDC125Q86Z20 511 aa23.08■■□□□ 1.29
CERNA1-201ENST00000559779 KRT27Q7Z3Y8 459 aa23.07■■□□□ 1.28
CERNA1-201ENST00000559779 USP19O94966 1318 aa23.07■■□□□ 1.28
CERNA1-201ENST00000559779 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
CERNA1-201ENST00000559779 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
CERNA1-201ENST00000559779 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
CERNA1-201ENST00000559779 EVA1CP58658 441 aa23.06■■□□□ 1.28
CERNA1-201ENST00000559779 NLRP6P59044 892 aa23.06■■□□□ 1.28
CERNA1-201ENST00000559779 GCP02774 474 aa23.05■■□□□ 1.28
CERNA1-201ENST00000559779 ZBTB7CA1YPR0 619 aa23.04■■□□□ 1.28
CERNA1-201ENST00000559779 ZNF692Q9BU19 519 aaPredicted RBP23.04■■□□□ 1.28
CERNA1-201ENST00000559779 SBNO2Q9Y2G9 1366 aa23.02■■□□□ 1.28
CERNA1-201ENST00000559779 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
CERNA1-201ENST00000559779 CPDO75976 1380 aa23.01■■□□□ 1.27
CERNA1-201ENST00000559779 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
CERNA1-201ENST00000559779 BLMP54132 1417 aaPredicted RBP23■■□□□ 1.27
CERNA1-201ENST00000559779 SSH2Q76I76 1423 aa23■■□□□ 1.27
CERNA1-201ENST00000559779 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
CERNA1-201ENST00000559779 TMC1Q8TDI8 760 aa23■■□□□ 1.27
CERNA1-201ENST00000559779 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
CERNA1-201ENST00000559779 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
CERNA1-201ENST00000559779 CAMTA1Q9Y6Y1 1673 aa22.99■■□□□ 1.27
CERNA1-201ENST00000559779 KTN1Q86UP2 1357 aaKnown RBP22.99■■□□□ 1.27
CERNA1-201ENST00000559779 PIK3C2AO00443 1686 aa22.98■■□□□ 1.27
CERNA1-201ENST00000559779 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
CERNA1-201ENST00000559779 PCGF6Q9BYE7 350 aa22.97■■□□□ 1.27
CERNA1-201ENST00000559779 CPSF1Q10570 1443 aaKnown RBP22.97■■□□□ 1.27
CERNA1-201ENST00000559779 EP400Q96L91 3159 aa22.97■■□□□ 1.27
CERNA1-201ENST00000559779 LMO7Q8WWI1 1683 aa22.96■■□□□ 1.27
CERNA1-201ENST00000559779 SOX12O15370 315 aa22.95■■□□□ 1.26
CERNA1-201ENST00000559779 SLIT3O75094 1523 aa22.95■■□□□ 1.26
CERNA1-201ENST00000559779 FAM182BQ5T319 152 aa22.95■■□□□ 1.26
CERNA1-201ENST00000559779 TTC21AQ8NDW8 1320 aa22.95■■□□□ 1.26
CERNA1-201ENST00000559779 THSD7AQ9UPZ6 1657 aa22.94■■□□□ 1.26
CERNA1-201ENST00000559779 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
CERNA1-201ENST00000559779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.94■■□□□ 1.26
CERNA1-201ENST00000559779 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
CERNA1-201ENST00000559779 DEFB132Q7Z7B7 95 aa22.93■■□□□ 1.26
CERNA1-201ENST00000559779 ZRANB1Q9UGI0 708 aa22.93■■□□□ 1.26
CERNA1-201ENST00000559779 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
CERNA1-201ENST00000559779 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
CERNA1-201ENST00000559779 MON2Q7Z3U7 1717 aa22.91■■□□□ 1.26
CERNA1-201ENST00000559779 TCP11L2Q8N4U5 519 aa22.91■■□□□ 1.26
CERNA1-201ENST00000559779 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
CERNA1-201ENST00000559779 AATKQ6ZMQ8 1374 aa22.9■■□□□ 1.26
CERNA1-201ENST00000559779 BARGINQ6ZT62 677 aa22.9■■□□□ 1.26
CERNA1-201ENST00000559779 TESK2Q96S53 571 aa22.89■■□□□ 1.25
CERNA1-201ENST00000559779 TERF2IPQ9NYB0 399 aa22.89■■□□□ 1.25
CERNA1-201ENST00000559779 CD163L1Q9NR16 1453 aa22.88■■□□□ 1.25
CERNA1-201ENST00000559779 PDE3BQ13370 1112 aa22.88■■□□□ 1.25
CERNA1-201ENST00000559779 PUS7Q96PZ0 661 aaKnown RBP22.88■■□□□ 1.25
CERNA1-201ENST00000559779 SLC24A1O60721 1099 aa22.87■■□□□ 1.25
CERNA1-201ENST00000559779 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
CERNA1-201ENST00000559779 CRB1P82279 1406 aa22.87■■□□□ 1.25
CERNA1-201ENST00000559779 BAG6P46379 1132 aa22.86■■□□□ 1.25
CERNA1-201ENST00000559779 TOM1L2Q6ZVM7 507 aa22.86■■□□□ 1.25
CERNA1-201ENST00000559779 ARHGEF25Q86VW2 580 aa22.86■■□□□ 1.25
CERNA1-201ENST00000559779 NME9Q86XW9 330 aa22.86■■□□□ 1.25
CERNA1-201ENST00000559779 AXIN2Q9Y2T1 843 aa22.85■■□□□ 1.25
CERNA1-201ENST00000559779 CSB-PGBD3P0DP91 1061 aa22.84■■□□□ 1.25
CERNA1-201ENST00000559779 FAM196AQ6ZSG2 479 aa22.84■■□□□ 1.25
CERNA1-201ENST00000559779 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms