RNA–Protein interactions for RNA: ENST00000559677.5

SPG21-210, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-210ENST00000559677 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
SPG21-210ENST00000559677 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
SPG21-210ENST00000559677 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
SPG21-210ENST00000559677 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
SPG21-210ENST00000559677 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
SPG21-210ENST00000559677 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
SPG21-210ENST00000559677 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
SPG21-210ENST00000559677 POLA2Q14181 598 aa13.06□□□□□ -0.32
SPG21-210ENST00000559677 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
SPG21-210ENST00000559677 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
SPG21-210ENST00000559677 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
SPG21-210ENST00000559677 ACEP12821 1306 aa13.05□□□□□ -0.32
SPG21-210ENST00000559677 CENPJQ9HC77 1338 aaPredicted RBP13.05□□□□□ -0.32
SPG21-210ENST00000559677 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
SPG21-210ENST00000559677 ATRNO75882 1429 aa13.04□□□□□ -0.32
SPG21-210ENST00000559677 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
SPG21-210ENST00000559677 CCDC9Q9Y3X0 531 aaKnown RBP13.03□□□□□ -0.32
SPG21-210ENST00000559677 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.32
SPG21-210ENST00000559677 VPS72Q15906 364 aa13.02□□□□□ -0.33
SPG21-210ENST00000559677 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.33
SPG21-210ENST00000559677 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
SPG21-210ENST00000559677 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
SPG21-210ENST00000559677 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
SPG21-210ENST00000559677 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
SPG21-210ENST00000559677 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
SPG21-210ENST00000559677 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
SPG21-210ENST00000559677 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
SPG21-210ENST00000559677 RGS12O14924 1447 aa13□□□□□ -0.33
SPG21-210ENST00000559677 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
SPG21-210ENST00000559677 SLIT2O94813 1529 aa12.99□□□□□ -0.33
SPG21-210ENST00000559677 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
SPG21-210ENST00000559677 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
SPG21-210ENST00000559677 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
SPG21-210ENST00000559677 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
SPG21-210ENST00000559677 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
SPG21-210ENST00000559677 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
SPG21-210ENST00000559677 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
SPG21-210ENST00000559677 EVA1CP58658 441 aa12.97□□□□□ -0.33
SPG21-210ENST00000559677 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
SPG21-210ENST00000559677 PRDM11Q9NQV5 511 aa12.97□□□□□ -0.33
SPG21-210ENST00000559677 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
SPG21-210ENST00000559677 CHRNA2Q15822 529 aa12.96□□□□□ -0.33
SPG21-210ENST00000559677 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.33
SPG21-210ENST00000559677 ATP7BP35670 1465 aa12.95□□□□□ -0.34
SPG21-210ENST00000559677 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
SPG21-210ENST00000559677 TRPM3Q9HCF6 1732 aaPredicted RBP12.94□□□□□ -0.34
SPG21-210ENST00000559677 GCP02774 474 aa12.94□□□□□ -0.34
SPG21-210ENST00000559677 NLRP6P59044 892 aa12.94□□□□□ -0.34
SPG21-210ENST00000559677 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
SPG21-210ENST00000559677 KRT27Q7Z3Y8 459 aa12.94□□□□□ -0.34
SPG21-210ENST00000559677 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
SPG21-210ENST00000559677 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
SPG21-210ENST00000559677 A0A0G2JS52 829 aa12.93□□□□□ -0.34
SPG21-210ENST00000559677 MYT1Q01538 1121 aa12.93□□□□□ -0.34
SPG21-210ENST00000559677 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
SPG21-210ENST00000559677 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
SPG21-210ENST00000559677 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
SPG21-210ENST00000559677 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
SPG21-210ENST00000559677 SPATA31A5Q5VU36 1347 aa12.91□□□□□ -0.34
SPG21-210ENST00000559677 SPATA31A7Q8IWB4 1347 aa12.91□□□□□ -0.34
SPG21-210ENST00000559677 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
SPG21-210ENST00000559677 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
SPG21-210ENST00000559677 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
SPG21-210ENST00000559677 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
SPG21-210ENST00000559677 GLI3P10071 1580 aa12.9□□□□□ -0.35
SPG21-210ENST00000559677 NWD2Q9ULI1 1742 aa12.89□□□□□ -0.35
SPG21-210ENST00000559677 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SPG21-210ENST00000559677 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
SPG21-210ENST00000559677 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
SPG21-210ENST00000559677 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
SPG21-210ENST00000559677 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
SPG21-210ENST00000559677 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
SPG21-210ENST00000559677 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
SPG21-210ENST00000559677 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
SPG21-210ENST00000559677 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
SPG21-210ENST00000559677 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
SPG21-210ENST00000559677 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
SPG21-210ENST00000559677 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
SPG21-210ENST00000559677 BRWD3Q6RI45 1802 aa12.87□□□□□ -0.35
SPG21-210ENST00000559677 USP19O94966 1318 aa12.87□□□□□ -0.35
SPG21-210ENST00000559677 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
SPG21-210ENST00000559677 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
SPG21-210ENST00000559677 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
SPG21-210ENST00000559677 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
SPG21-210ENST00000559677 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
SPG21-210ENST00000559677 PUS7Q96PZ0 661 aaKnown RBP12.86□□□□□ -0.35
SPG21-210ENST00000559677 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
SPG21-210ENST00000559677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPG21-210ENST00000559677 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
SPG21-210ENST00000559677 USP6P35125 1406 aa12.85□□□□□ -0.35
SPG21-210ENST00000559677 CPDO75976 1380 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
SPG21-210ENST00000559677 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
SPG21-210ENST00000559677 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
SPG21-210ENST00000559677 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
SPG21-210ENST00000559677 SOX12O15370 315 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms