RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 ATP7BP35670 1465 aa22.15■■□□□ 1.14
IRF9-204ENST00000559229 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
IRF9-204ENST00000559229 FAM98CQ17RN3 349 aaKnown RBP22.13■■□□□ 1.13
IRF9-204ENST00000559229 CCDC61Q9Y6R9 512 aa22.13■■□□□ 1.13
IRF9-204ENST00000559229 ARHGEF28Q8N1W1 1705 aaKnown RBP22.13■■□□□ 1.13
IRF9-204ENST00000559229 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
IRF9-204ENST00000559229 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
IRF9-204ENST00000559229 BRWD3Q6RI45 1802 aa22.11■■□□□ 1.13
IRF9-204ENST00000559229 A0A0G2JS52 829 aa22.11■■□□□ 1.13
IRF9-204ENST00000559229 MYT1Q01538 1121 aa22.11■■□□□ 1.13
IRF9-204ENST00000559229 PRDM11Q9NQV5 511 aa22.11■■□□□ 1.13
IRF9-204ENST00000559229 SPATA31A5Q5VU36 1347 aa22.1■■□□□ 1.13
IRF9-204ENST00000559229 SPATA31A7Q8IWB4 1347 aa22.1■■□□□ 1.13
IRF9-204ENST00000559229 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
IRF9-204ENST00000559229 PLEKHG3A1L390 1219 aa22.1■■□□□ 1.13
IRF9-204ENST00000559229 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
IRF9-204ENST00000559229 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
IRF9-204ENST00000559229 ACEP12821 1306 aa22.09■■□□□ 1.13
IRF9-204ENST00000559229 NRAPQ86VF7 1730 aa22.08■■□□□ 1.12
IRF9-204ENST00000559229 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
IRF9-204ENST00000559229 ITSN1Q15811 1721 aa22.06■■□□□ 1.12
IRF9-204ENST00000559229 KIAA0232Q92628 1395 aa22.06■■□□□ 1.12
IRF9-204ENST00000559229 NUTM2GQ5VZR2 741 aa22.05■■□□□ 1.12
IRF9-204ENST00000559229 CRYBG1Q9Y4K1 1723 aa22.04■■□□□ 1.12
IRF9-204ENST00000559229 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
IRF9-204ENST00000559229 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
IRF9-204ENST00000559229 SPATA31A1Q5TZJ5 1347 aa22.03■■□□□ 1.12
IRF9-204ENST00000559229 CENPJQ9HC77 1338 aaPredicted RBP22.03■■□□□ 1.12
IRF9-204ENST00000559229 BAG6P46379 1132 aa22.02■■□□□ 1.12
IRF9-204ENST00000559229 SRPK2P78362 688 aaKnown RBP22.02■■□□□ 1.12
IRF9-204ENST00000559229 ABTB2Q8N961 1025 aa22.02■■□□□ 1.12
IRF9-204ENST00000559229 STRN4Q9NRL3 753 aa22■■□□□ 1.11
IRF9-204ENST00000559229 TOPAZ1Q8N9V7 1692 aa21.99■■□□□ 1.11
IRF9-204ENST00000559229 FAM182BQ5T319 152 aa21.99■■□□□ 1.11
IRF9-204ENST00000559229 L3MBTL2Q969R5 705 aa21.99■■□□□ 1.11
IRF9-204ENST00000559229 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
IRF9-204ENST00000559229 EVA1CP58658 441 aa21.98■■□□□ 1.11
IRF9-204ENST00000559229 PPIP5K1Q6PFW1 1433 aa21.97■■□□□ 1.11
IRF9-204ENST00000559229 NLRP13Q86W25 1043 aa21.97■■□□□ 1.11
IRF9-204ENST00000559229 USP19O94966 1318 aa21.97■■□□□ 1.11
IRF9-204ENST00000559229 PHRF1Q9P1Y6 1649 aaKnown RBP21.96■■□□□ 1.11
IRF9-204ENST00000559229 BRD4O60885 1362 aaPredicted RBP21.96■■□□□ 1.11
IRF9-204ENST00000559229 CPDO75976 1380 aa21.96■■□□□ 1.11
IRF9-204ENST00000559229 THSD7AQ9UPZ6 1657 aa21.95■■□□□ 1.1
IRF9-204ENST00000559229 GCP02774 474 aa21.95■■□□□ 1.1
IRF9-204ENST00000559229 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
IRF9-204ENST00000559229 EN1Q05925 392 aaPredicted RBP21.94■■□□□ 1.1
IRF9-204ENST00000559229 FAM196AQ6ZSG2 479 aa21.94■■□□□ 1.1
IRF9-204ENST00000559229 CABP1Q9NZU7 370 aa21.94■■□□□ 1.1
IRF9-204ENST00000559229 SSH2Q76I76 1423 aa21.93■■□□□ 1.1
IRF9-204ENST00000559229 SIN3AQ96ST3 1273 aa21.93■■□□□ 1.1
IRF9-204ENST00000559229 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
IRF9-204ENST00000559229 LARP1Q6PKG0 1096 aaKnown RBP21.91■■□□□ 1.1
IRF9-204ENST00000559229 CAMTA1Q9Y6Y1 1673 aa21.91■■□□□ 1.1
IRF9-204ENST00000559229 DISP2A7MBM2 1401 aa21.9■■□□□ 1.1
IRF9-204ENST00000559229 TCP11L2Q8N4U5 519 aa21.9■■□□□ 1.1
IRF9-204ENST00000559229 NRKQ7Z2Y5 1582 aa21.9■■□□□ 1.1
IRF9-204ENST00000559229 EVC2Q86UK5 1308 aa21.89■■□□□ 1.1
IRF9-204ENST00000559229 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
IRF9-204ENST00000559229 THRAP3Q9Y2W1 955 aaKnown RBP21.89■■□□□ 1.09
IRF9-204ENST00000559229 USP6P35125 1406 aa21.89■■□□□ 1.09
IRF9-204ENST00000559229 LRP5O75197 1615 aa21.88■■□□□ 1.09
IRF9-204ENST00000559229 PSDA5PKW4 1024 aaPredicted RBP21.88■■□□□ 1.09
IRF9-204ENST00000559229 TRIM37O94972 964 aa21.88■■□□□ 1.09
IRF9-204ENST00000559229 NLRP6P59044 892 aa21.88■■□□□ 1.09
IRF9-204ENST00000559229 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
IRF9-204ENST00000559229 RGPD1P0DJD0 1748 aa21.86■■□□□ 1.09
IRF9-204ENST00000559229 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
IRF9-204ENST00000559229 LMO7Q8WWI1 1683 aa21.85■■□□□ 1.09
IRF9-204ENST00000559229 QRICH2Q9H0J4 1663 aa21.85■■□□□ 1.09
IRF9-204ENST00000559229 EZH2Q15910 746 aaKnown RBP21.85■■□□□ 1.09
IRF9-204ENST00000559229 CAMKK2Q96RR4 588 aa21.85■■□□□ 1.09
IRF9-204ENST00000559229 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
IRF9-204ENST00000559229 APBA3O96018 575 aa21.84■■□□□ 1.09
IRF9-204ENST00000559229 AATKQ6ZMQ8 1374 aa21.83■■□□□ 1.08
IRF9-204ENST00000559229 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.08
IRF9-204ENST00000559229 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
IRF9-204ENST00000559229 R3HDM1Q15032 1099 aaKnown RBP21.81■■□□□ 1.08
IRF9-204ENST00000559229 CRB1P82279 1406 aa21.8■■□□□ 1.08
IRF9-204ENST00000559229 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
IRF9-204ENST00000559229 ZBTB7CA1YPR0 619 aa21.8■■□□□ 1.08
IRF9-204ENST00000559229 TNS1Q9HBL0 1735 aaKnown RBP21.8■■□□□ 1.08
IRF9-204ENST00000559229 SLIT3O75094 1523 aa21.8■■□□□ 1.08
IRF9-204ENST00000559229 TTC21BQ7Z4L5 1316 aa21.8■■□□□ 1.08
IRF9-204ENST00000559229 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
IRF9-204ENST00000559229 KCNH5Q8NCM2 988 aa21.77■■□□□ 1.08
IRF9-204ENST00000559229 TOM1L2Q6ZVM7 507 aa21.76■■□□□ 1.07
IRF9-204ENST00000559229 ARHGEF25Q86VW2 580 aa21.76■■□□□ 1.07
IRF9-204ENST00000559229 AXIN2Q9Y2T1 843 aa21.76■■□□□ 1.07
IRF9-204ENST00000559229 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
IRF9-204ENST00000559229 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
IRF9-204ENST00000559229 WDR17Q8IZU2 1322 aa21.74■■□□□ 1.07
IRF9-204ENST00000559229 PIK3C2AO00443 1686 aa21.73■■□□□ 1.07
IRF9-204ENST00000559229 SBNO2Q9Y2G9 1366 aa21.73■■□□□ 1.07
IRF9-204ENST00000559229 DDB1Q16531 1140 aa21.72■■□□□ 1.07
IRF9-204ENST00000559229 KTN1Q86UP2 1357 aaKnown RBP21.72■■□□□ 1.07
IRF9-204ENST00000559229 NBPF14Q5TI25 921 aa21.71■■□□□ 1.07
IRF9-204ENST00000559229 CDCA7Q9BWT1 371 aaPredicted RBP21.71■■□□□ 1.07
IRF9-204ENST00000559229 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
IRF9-204ENST00000559229 PARP4Q9UKK3 1724 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms