RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-215ENST00000559201 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
LRRC49-215ENST00000559201 PTCH1Q13635 1447 aa14.05□□□□□ -0.16
LRRC49-215ENST00000559201 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
LRRC49-215ENST00000559201 AATKQ6ZMQ8 1374 aa14.04□□□□□ -0.16
LRRC49-215ENST00000559201 FER1L4A9Z1Z3 1794 aa14.04□□□□□ -0.16
LRRC49-215ENST00000559201 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
LRRC49-215ENST00000559201 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
LRRC49-215ENST00000559201 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
LRRC49-215ENST00000559201 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
LRRC49-215ENST00000559201 ADGRB2O60241 1585 aa14.02□□□□□ -0.16
LRRC49-215ENST00000559201 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
LRRC49-215ENST00000559201 WWC1Q8IX03 1113 aa14.02□□□□□ -0.17
LRRC49-215ENST00000559201 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
LRRC49-215ENST00000559201 COG3Q96JB2 828 aa14.02□□□□□ -0.17
LRRC49-215ENST00000559201 FCHSD2O94868 740 aa14.01□□□□□ -0.17
LRRC49-215ENST00000559201 NEFMP07197 916 aa14.01□□□□□ -0.17
LRRC49-215ENST00000559201 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
LRRC49-215ENST00000559201 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
LRRC49-215ENST00000559201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
LRRC49-215ENST00000559201 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
LRRC49-215ENST00000559201 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
LRRC49-215ENST00000559201 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
LRRC49-215ENST00000559201 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
LRRC49-215ENST00000559201 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
LRRC49-215ENST00000559201 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
LRRC49-215ENST00000559201 NKTRP30414 1462 aaKnown RBP13.98□□□□□ -0.17
LRRC49-215ENST00000559201 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
LRRC49-215ENST00000559201 IL16Q14005 1332 aa13.97□□□□□ -0.17
LRRC49-215ENST00000559201 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
LRRC49-215ENST00000559201 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
LRRC49-215ENST00000559201 TTC21BQ7Z4L5 1316 aa13.96□□□□□ -0.17
LRRC49-215ENST00000559201 PRR36Q9H6K5 1346 aa13.96□□□□□ -0.17
LRRC49-215ENST00000559201 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
LRRC49-215ENST00000559201 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
LRRC49-215ENST00000559201 ACEP12821 1306 aa13.95□□□□□ -0.18
LRRC49-215ENST00000559201 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
LRRC49-215ENST00000559201 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
LRRC49-215ENST00000559201 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
LRRC49-215ENST00000559201 IQSEC2Q5JU85 1478 aa13.94□□□□□ -0.18
LRRC49-215ENST00000559201 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
LRRC49-215ENST00000559201 AAMPQ13685 434 aa13.94□□□□□ -0.18
LRRC49-215ENST00000559201 NME9Q86XW9 330 aa13.94□□□□□ -0.18
LRRC49-215ENST00000559201 ADAMTSL3P82987 1691 aa13.94□□□□□ -0.18
LRRC49-215ENST00000559201 TMPOP42166 694 aaKnown RBP13.93□□□□□ -0.18
LRRC49-215ENST00000559201 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
LRRC49-215ENST00000559201 PDE3AQ14432 1141 aa13.92□□□□□ -0.18
LRRC49-215ENST00000559201 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
LRRC49-215ENST00000559201 USP6P35125 1406 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 MS4A1P11836 297 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 KCNA6P17658 529 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 IL13P35225 146 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 NGDNQ8NEJ9 315 aaKnown RBP13.91□□□□□ -0.18
LRRC49-215ENST00000559201 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 FBXO41Q8TF61 875 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
LRRC49-215ENST00000559201 LMOD3Q0VAK6 560 aa13.9□□□□□ -0.18
LRRC49-215ENST00000559201 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
LRRC49-215ENST00000559201 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
LRRC49-215ENST00000559201 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
LRRC49-215ENST00000559201 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
LRRC49-215ENST00000559201 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
LRRC49-215ENST00000559201 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
LRRC49-215ENST00000559201 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
LRRC49-215ENST00000559201 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
LRRC49-215ENST00000559201 RIPK4P57078 832 aa13.88□□□□□ -0.19
LRRC49-215ENST00000559201 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
LRRC49-215ENST00000559201 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
LRRC49-215ENST00000559201 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
LRRC49-215ENST00000559201 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
LRRC49-215ENST00000559201 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
LRRC49-215ENST00000559201 MON2Q7Z3U7 1717 aa13.87□□□□□ -0.19
LRRC49-215ENST00000559201 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
LRRC49-215ENST00000559201 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
LRRC49-215ENST00000559201 NPHP4O75161 1426 aaPredicted RBP13.87□□□□□ -0.19
LRRC49-215ENST00000559201 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 CRBNQ96SW2 442 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 OVOS2A0A0J9YW53 1432 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 OVOS2Q6IE36 1432 aa13.86□□□□□ -0.19
LRRC49-215ENST00000559201 PLIN1O60240 522 aa13.85□□□□□ -0.19
LRRC49-215ENST00000559201 PRKAR2BP31323 418 aa13.85□□□□□ -0.19
LRRC49-215ENST00000559201 RARSP54136 660 aaKnown RBP13.85□□□□□ -0.19
LRRC49-215ENST00000559201 AKAP12Q02952 1782 aa13.85□□□□□ -0.19
LRRC49-215ENST00000559201 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
LRRC49-215ENST00000559201 TCERG1O14776 1098 aaKnown RBP13.84□□□□□ -0.19
LRRC49-215ENST00000559201 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
LRRC49-215ENST00000559201 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
LRRC49-215ENST00000559201 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
LRRC49-215ENST00000559201 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
LRRC49-215ENST00000559201 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
LRRC49-215ENST00000559201 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
LRRC49-215ENST00000559201 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
LRRC49-215ENST00000559201 GNAI1P63096 354 aa13.82□□□□□ -0.2
LRRC49-215ENST00000559201 CENPQQ7L2Z9 268 aaPredicted RBP13.82□□□□□ -0.2
LRRC49-215ENST00000559201 BCAR3O75815 825 aa13.81□□□□□ -0.2
LRRC49-215ENST00000559201 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
LRRC49-215ENST00000559201 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
LRRC49-215ENST00000559201 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
LRRC49-215ENST00000559201 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms