RNA–Protein interactions for RNA: ENST00000559074.5

SEMA4B-208, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-208ENST00000559074 NME9Q86XW9 330 aa20.92■□□□□ 0.94
SEMA4B-208ENST00000559074 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
SEMA4B-208ENST00000559074 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
SEMA4B-208ENST00000559074 MTHFSP49914 203 aa20.9■□□□□ 0.94
SEMA4B-208ENST00000559074 DCCP43146 1447 aa20.9■□□□□ 0.94
SEMA4B-208ENST00000559074 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.94
SEMA4B-208ENST00000559074 XIRP1Q702N8 1843 aaKnown RBP20.89■□□□□ 0.94
SEMA4B-208ENST00000559074 OVOS2A0A0J9YW53 1432 aa20.89■□□□□ 0.93
SEMA4B-208ENST00000559074 OVOS2Q6IE36 1432 aa20.89■□□□□ 0.93
SEMA4B-208ENST00000559074 PIK3C2AO00443 1686 aa20.89■□□□□ 0.93
SEMA4B-208ENST00000559074 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
SEMA4B-208ENST00000559074 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
SEMA4B-208ENST00000559074 USP54Q70EL1 1684 aa20.88■□□□□ 0.93
SEMA4B-208ENST00000559074 CFAP53Q96M91 514 aa20.88■□□□□ 0.93
SEMA4B-208ENST00000559074 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
SEMA4B-208ENST00000559074 COG3Q96JB2 828 aa20.87■□□□□ 0.93
SEMA4B-208ENST00000559074 ADAMTS8Q9UP79 889 aa20.87■□□□□ 0.93
SEMA4B-208ENST00000559074 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
SEMA4B-208ENST00000559074 C19orf44Q9H6X5 657 aa20.86■□□□□ 0.93
SEMA4B-208ENST00000559074 PHF8Q9UPP1 1060 aa20.86■□□□□ 0.93
SEMA4B-208ENST00000559074 MAP2P11137 1827 aaKnown RBP20.86■□□□□ 0.93
SEMA4B-208ENST00000559074 AATKQ6ZMQ8 1374 aa20.86■□□□□ 0.93
SEMA4B-208ENST00000559074 ZRANB1Q9UGI0 708 aa20.86■□□□□ 0.93
SEMA4B-208ENST00000559074 C1orf167Q5SNV9 1468 aa20.84■□□□□ 0.93
SEMA4B-208ENST00000559074 MARF1Q9Y4F3 1742 aaKnown RBP20.83■□□□□ 0.93
SEMA4B-208ENST00000559074 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
SEMA4B-208ENST00000559074 USP31Q70CQ4 1352 aa20.82■□□□□ 0.92
SEMA4B-208ENST00000559074 PNPLA6Q8IY17 1366 aa20.82■□□□□ 0.92
SEMA4B-208ENST00000559074 MST1RQ04912 1400 aa20.82■□□□□ 0.92
SEMA4B-208ENST00000559074 ESCO1Q5FWF5 840 aa20.82■□□□□ 0.92
SEMA4B-208ENST00000559074 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
SEMA4B-208ENST00000559074 ZNF335Q9H4Z2 1342 aaPredicted RBP20.8■□□□□ 0.92
SEMA4B-208ENST00000559074 POLKQ9UBT6 870 aa20.8■□□□□ 0.92
SEMA4B-208ENST00000559074 MSH6P52701 1360 aa20.79■□□□□ 0.92
SEMA4B-208ENST00000559074 ATF3P18847 181 aa20.78■□□□□ 0.92
SEMA4B-208ENST00000559074 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
SEMA4B-208ENST00000559074 SENP3-EIF4A1A0A087X0R7 540 aa20.77■□□□□ 0.92
SEMA4B-208ENST00000559074 ORAI2Q96SN7 254 aa20.77■□□□□ 0.92
SEMA4B-208ENST00000559074 TRPM3Q9HCF6 1732 aaPredicted RBP20.77■□□□□ 0.92
SEMA4B-208ENST00000559074 FBLN1P23142 703 aa20.77■□□□□ 0.91
SEMA4B-208ENST00000559074 CADPS2Q86UW7 1296 aa20.76■□□□□ 0.91
SEMA4B-208ENST00000559074 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
SEMA4B-208ENST00000559074 PEAK1Q9H792 1746 aa20.75■□□□□ 0.91
SEMA4B-208ENST00000559074 CCDC146Q8IYE0 955 aa20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 IQSEC2Q5JU85 1478 aa20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 DIAPH1O60610 1272 aaKnown RBP20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 PSME1Q06323 249 aa20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 RRS1Q15050 365 aaKnown RBP20.73■□□□□ 0.91
SEMA4B-208ENST00000559074 PPM1GO15355 546 aaPredicted RBP20.72■□□□□ 0.91
SEMA4B-208ENST00000559074 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
SEMA4B-208ENST00000559074 NLRP6P59044 892 aa20.7■□□□□ 0.91
SEMA4B-208ENST00000559074 ABTB2Q8N961 1025 aa20.7■□□□□ 0.91
SEMA4B-208ENST00000559074 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.91
SEMA4B-208ENST00000559074 FOXO3O43524 673 aa20.7■□□□□ 0.9
SEMA4B-208ENST00000559074 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-208ENST00000559074 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
SEMA4B-208ENST00000559074 RUNDC1Q96C34 613 aa20.7■□□□□ 0.9
SEMA4B-208ENST00000559074 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-208ENST00000559074 ALS2Q96Q42 1657 aa20.69■□□□□ 0.9
SEMA4B-208ENST00000559074 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-208ENST00000559074 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
SEMA4B-208ENST00000559074 APAF1O14727 1248 aa20.67■□□□□ 0.9
SEMA4B-208ENST00000559074 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
SEMA4B-208ENST00000559074 NFAT5O94916 1531 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 SBNO1A3KN83 1393 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 SLIT3O75094 1523 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 LTN1O94822 1766 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 ZNF521Q96K83 1311 aa20.66■□□□□ 0.9
SEMA4B-208ENST00000559074 IL13P35225 146 aa20.65■□□□□ 0.9
SEMA4B-208ENST00000559074 KRT28Q7Z3Y7 464 aa20.65■□□□□ 0.9
SEMA4B-208ENST00000559074 MAP3K19Q56UN5 1328 aa20.65■□□□□ 0.9
SEMA4B-208ENST00000559074 RGPD1P0DJD0 1748 aa20.65■□□□□ 0.9
SEMA4B-208ENST00000559074 FLT4P35916 1363 aa20.65■□□□□ 0.9
SEMA4B-208ENST00000559074 SOX12O15370 315 aa20.64■□□□□ 0.9
SEMA4B-208ENST00000559074 XPCQ01831 940 aaPredicted RBP20.64■□□□□ 0.9
SEMA4B-208ENST00000559074 KIF24Q5T7B8 1368 aa20.64■□□□□ 0.89
SEMA4B-208ENST00000559074 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
SEMA4B-208ENST00000559074 PXDNQ92626 1479 aa20.63■□□□□ 0.89
SEMA4B-208ENST00000559074 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
SEMA4B-208ENST00000559074 NPHP3Q7Z494 1330 aa20.62■□□□□ 0.89
SEMA4B-208ENST00000559074 LTBP4Q8N2S1 1624 aa20.61■□□□□ 0.89
SEMA4B-208ENST00000559074 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
SEMA4B-208ENST00000559074 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
SEMA4B-208ENST00000559074 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
SEMA4B-208ENST00000559074 EIF4A2Q14240 407 aaKnown RBP20.6■□□□□ 0.89
SEMA4B-208ENST00000559074 USP19O94966 1318 aa20.6■□□□□ 0.89
SEMA4B-208ENST00000559074 FCHSD2O94868 740 aa20.59■□□□□ 0.89
SEMA4B-208ENST00000559074 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
SEMA4B-208ENST00000559074 BRINP3Q76B58 766 aa20.59■□□□□ 0.89
SEMA4B-208ENST00000559074 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
SEMA4B-208ENST00000559074 TNS3Q68CZ2 1445 aa20.59■□□□□ 0.89
SEMA4B-208ENST00000559074 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
SEMA4B-208ENST00000559074 KCNH5Q8NCM2 988 aa20.58■□□□□ 0.89
SEMA4B-208ENST00000559074 CDCA7LQ96GN5 454 aa20.58■□□□□ 0.89
SEMA4B-208ENST00000559074 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
SEMA4B-208ENST00000559074 AMPHP49418 695 aa20.58■□□□□ 0.88
SEMA4B-208ENST00000559074 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.88
SEMA4B-208ENST00000559074 SLAIN2Q9P270 581 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms