RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 RARSP54136 660 aaKnown RBP8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 GSE1Q14687 1217 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 PLEKHF1Q96S99 279 aa8.32□□□□□ -1.08
AC087516.2-201ENST00000558963 LTBP4Q8N2S1 1624 aa8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 PIK3R4Q99570 1358 aa8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 RGPD1P0DJD0 1748 aa8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 UBR1Q8IWV7 1749 aa8.31□□□□□ -1.08
AC087516.2-201ENST00000558963 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
AC087516.2-201ENST00000558963 EDC4Q6P2E9 1401 aaKnown RBP8.3□□□□□ -1.08
AC087516.2-201ENST00000558963 DMRT2Q9Y5R5 561 aa8.3□□□□□ -1.08
AC087516.2-201ENST00000558963 N4BP2Q86UW6 1770 aaPredicted RBP8.3□□□□□ -1.08
AC087516.2-201ENST00000558963 TCP11L2Q8N4U5 519 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 SLC12A5Q9H2X9 1139 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 MAP2P11137 1827 aaKnown RBP8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 IDI1Q13907 227 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 TRAK1Q9UPV9 953 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 USP19O94966 1318 aa8.29□□□□□ -1.08
AC087516.2-201ENST00000558963 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 MTHFSP49914 203 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 HDAC1Q13547 482 aaPredicted RBP8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 CCDC146Q8IYE0 955 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 PTCH1Q13635 1447 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 DIP2AQ14689 1571 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 DLG5Q8TDM6 1919 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
AC087516.2-201ENST00000558963 BCAR3O75815 825 aa8.27□□□□□ -1.08
AC087516.2-201ENST00000558963 RIMS2Q9UQ26 1411 aa8.26□□□□□ -1.09
AC087516.2-201ENST00000558963 FMN2Q9NZ56 1722 aa8.26□□□□□ -1.09
AC087516.2-201ENST00000558963 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
AC087516.2-201ENST00000558963 GGT6Q6P531 493 aa8.26□□□□□ -1.09
AC087516.2-201ENST00000558963 KIF16BQ96L93 1317 aa8.25□□□□□ -1.09
AC087516.2-201ENST00000558963 FCHSD2O94868 740 aa8.25□□□□□ -1.09
AC087516.2-201ENST00000558963 IGHDP01880 384 aa8.25□□□□□ -1.09
AC087516.2-201ENST00000558963 LRRC37A3O60309 1634 aa8.25□□□□□ -1.09
AC087516.2-201ENST00000558963 FYB1O15117 783 aa8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 TMPOP42166 694 aaKnown RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 ARHGAP45Q92619 1136 aa8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 RWDD1Q9H446 243 aaPredicted RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 TRIM35Q9UPQ4 493 aa8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 ZKSCAN2Q63HK3 967 aa8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 DAXXQ9UER7 740 aaPredicted RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 CALD1Q05682 793 aaKnown RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 FRAT1Q92837 279 aaPredicted RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 CHMP4BQ9H444 224 aaKnown RBP8.24□□□□□ -1.09
AC087516.2-201ENST00000558963 NCOA3Q9Y6Q9 1424 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 SLIT1O75093 1534 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 RAPGEF3O95398 923 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 HDGFL2Q7Z4V5 671 aaPredicted RBP8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 SMC5Q8IY18 1101 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 DDX19BQ9UMR2 479 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
AC087516.2-201ENST00000558963 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
AC087516.2-201ENST00000558963 ARHGAP23Q9P227 1491 aa8.22□□□□□ -1.09
AC087516.2-201ENST00000558963 XRN1Q8IZH2 1706 aaKnown RBP8.22□□□□□ -1.09
AC087516.2-201ENST00000558963 EIF5BO60841 1220 aaKnown RBP8.21□□□□□ -1.09
AC087516.2-201ENST00000558963 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.09
AC087516.2-201ENST00000558963 FAM43AQ8N2R8 423 aa8.21□□□□□ -1.09
AC087516.2-201ENST00000558963 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 RLBP1P12271 317 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 OVOS2A0A0J9YW53 1432 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 OVOS2Q6IE36 1432 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 CACNA1FO60840 1977 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 BECN1Q14457 450 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 ATF7IPQ6VMQ6 1270 aa8.21□□□□□ -1.1
AC087516.2-201ENST00000558963 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 IPO8O15397 1037 aaKnown RBP8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 CHGAP10645 457 aaKnown RBP8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 PRAM1Q96QH2 718 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 CABP2Q9NPB3 220 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 CEP170BQ9Y4F5 1589 aaPredicted RBP8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 ZBTB40Q9NUA8 1239 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 BRPF3Q9ULD4 1205 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 TUBGCP6Q96RT7 1819 aa8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 MARF1Q9Y4F3 1742 aaKnown RBP8.2□□□□□ -1.1
AC087516.2-201ENST00000558963 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms