RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
PCAT29-202ENST00000558941 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCAT29-202ENST00000558941 HTRA3P83110 453 aa12.24□□□□□ -0.45
PCAT29-202ENST00000558941 ARXQ96QS3 562 aa12.24□□□□□ -0.45
PCAT29-202ENST00000558941 E9PCH4 1651 aa12.23□□□□□ -0.45
PCAT29-202ENST00000558941 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
PCAT29-202ENST00000558941 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
PCAT29-202ENST00000558941 PROM2Q8N271 834 aa12.23□□□□□ -0.45
PCAT29-202ENST00000558941 ZNF526Q8TF50 670 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-202ENST00000558941 MTFR1LQ9H019 292 aa12.23□□□□□ -0.45
PCAT29-202ENST00000558941 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
PCAT29-202ENST00000558941 KLRG1Q96E93 195 aa12.22□□□□□ -0.45
PCAT29-202ENST00000558941 CCDC144AA2RUR9 1427 aa12.21□□□□□ -0.45
PCAT29-202ENST00000558941 KIAA1210Q9ULL0 1709 aa12.21□□□□□ -0.45
PCAT29-202ENST00000558941 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.46
PCAT29-202ENST00000558941 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
PCAT29-202ENST00000558941 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
PCAT29-202ENST00000558941 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
PCAT29-202ENST00000558941 SPATA31A1Q5TZJ5 1347 aa12.2□□□□□ -0.46
PCAT29-202ENST00000558941 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
PCAT29-202ENST00000558941 NLGN2Q8NFZ4 835 aa12.2□□□□□ -0.46
PCAT29-202ENST00000558941 TECPR2O15040 1411 aa12.2□□□□□ -0.46
PCAT29-202ENST00000558941 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
PCAT29-202ENST00000558941 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
PCAT29-202ENST00000558941 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
PCAT29-202ENST00000558941 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
PCAT29-202ENST00000558941 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
PCAT29-202ENST00000558941 PLSCR1O15162 318 aa12.17□□□□□ -0.46
PCAT29-202ENST00000558941 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
PCAT29-202ENST00000558941 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
PCAT29-202ENST00000558941 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
PCAT29-202ENST00000558941 AATKQ6ZMQ8 1374 aa12.17□□□□□ -0.46
PCAT29-202ENST00000558941 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
PCAT29-202ENST00000558941 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
PCAT29-202ENST00000558941 ALS2Q96Q42 1657 aa12.16□□□□□ -0.46
PCAT29-202ENST00000558941 NAIPQ13075 1403 aa12.14□□□□□ -0.47
PCAT29-202ENST00000558941 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
PCAT29-202ENST00000558941 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
PCAT29-202ENST00000558941 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
PCAT29-202ENST00000558941 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
PCAT29-202ENST00000558941 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
PCAT29-202ENST00000558941 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
PCAT29-202ENST00000558941 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
PCAT29-202ENST00000558941 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
PCAT29-202ENST00000558941 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
PCAT29-202ENST00000558941 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
PCAT29-202ENST00000558941 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
PCAT29-202ENST00000558941 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
PCAT29-202ENST00000558941 STK32BQ9NY57 414 aa12.09□□□□□ -0.47
PCAT29-202ENST00000558941 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
PCAT29-202ENST00000558941 IFT172Q9UG01 1749 aa12.08□□□□□ -0.47
PCAT29-202ENST00000558941 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.47
PCAT29-202ENST00000558941 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
PCAT29-202ENST00000558941 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
PCAT29-202ENST00000558941 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
PCAT29-202ENST00000558941 ATP7BP35670 1465 aa12.08□□□□□ -0.48
PCAT29-202ENST00000558941 TULP4Q9NRJ4 1543 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 TOMM70O94826 608 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 DAPK1P53355 1430 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
PCAT29-202ENST00000558941 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
PCAT29-202ENST00000558941 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
PCAT29-202ENST00000558941 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
PCAT29-202ENST00000558941 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
PCAT29-202ENST00000558941 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
PCAT29-202ENST00000558941 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
PCAT29-202ENST00000558941 CLTCL1P53675 1640 aa12.02□□□□□ -0.49
PCAT29-202ENST00000558941 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
PCAT29-202ENST00000558941 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
PCAT29-202ENST00000558941 PLEKHH1Q9ULM0 1364 aa12.02□□□□□ -0.49
PCAT29-202ENST00000558941 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
PCAT29-202ENST00000558941 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
PCAT29-202ENST00000558941 AKAP12Q02952 1782 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 PSME1Q06323 249 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 CHRNA2Q15822 529 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 KIAA0232Q92628 1395 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 CICQ96RK0 1608 aaPredicted RBP12□□□□□ -0.49
PCAT29-202ENST00000558941 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
PCAT29-202ENST00000558941 WAPLQ7Z5K2 1190 aa11.99□□□□□ -0.49
PCAT29-202ENST00000558941 PRDM11Q9NQV5 511 aa11.99□□□□□ -0.49
PCAT29-202ENST00000558941 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
PCAT29-202ENST00000558941 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
PCAT29-202ENST00000558941 NMRK2Q9NPI5 230 aa11.98□□□□□ -0.49
PCAT29-202ENST00000558941 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
PCAT29-202ENST00000558941 MLLT1Q03111 559 aaPredicted RBP11.97□□□□□ -0.49
PCAT29-202ENST00000558941 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
PCAT29-202ENST00000558941 BCL9O00512 1426 aa11.96□□□□□ -0.49
PCAT29-202ENST00000558941 RGS19P49795 217 aa11.96□□□□□ -0.49
PCAT29-202ENST00000558941 ZNF326Q5BKZ1 582 aaKnown RBP11.96□□□□□ -0.49
PCAT29-202ENST00000558941 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
PCAT29-202ENST00000558941 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
PCAT29-202ENST00000558941 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
PCAT29-202ENST00000558941 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
PCAT29-202ENST00000558941 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
PCAT29-202ENST00000558941 APLP2Q06481 763 aa11.93□□□□□ -0.5
PCAT29-202ENST00000558941 PPLO60437 1756 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms