RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
SMAD6-203ENST00000558937 POLR3AO14802 1390 aaPredicted RBP21.74■■□□□ 1.07
SMAD6-203ENST00000558937 PAK3O75914 559 aaPredicted RBP21.73■■□□□ 1.07
SMAD6-203ENST00000558937 COL14A1Q05707 1796 aaKnown RBP21.72■■□□□ 1.07
SMAD6-203ENST00000558937 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
SMAD6-203ENST00000558937 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
SMAD6-203ENST00000558937 ACEP12821 1306 aa21.71■■□□□ 1.07
SMAD6-203ENST00000558937 FAM83GA6ND36 823 aa21.7■■□□□ 1.06
SMAD6-203ENST00000558937 VPS72Q15906 364 aa21.7■■□□□ 1.06
SMAD6-203ENST00000558937 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
SMAD6-203ENST00000558937 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
SMAD6-203ENST00000558937 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
SMAD6-203ENST00000558937 BRWD3Q6RI45 1802 aa21.69■■□□□ 1.06
SMAD6-203ENST00000558937 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
SMAD6-203ENST00000558937 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
SMAD6-203ENST00000558937 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
SMAD6-203ENST00000558937 BTG4Q9NY30 223 aa21.65■■□□□ 1.06
SMAD6-203ENST00000558937 CCDC9Q9Y3X0 531 aaKnown RBP21.65■■□□□ 1.06
SMAD6-203ENST00000558937 NRKQ7Z2Y5 1582 aa21.63■■□□□ 1.05
SMAD6-203ENST00000558937 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
SMAD6-203ENST00000558937 PRDM11Q9NQV5 511 aa21.63■■□□□ 1.05
SMAD6-203ENST00000558937 KIAA0232Q92628 1395 aa21.61■■□□□ 1.05
SMAD6-203ENST00000558937 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
SMAD6-203ENST00000558937 SEPT12Q8IYM1 358 aa21.61■■□□□ 1.05
SMAD6-203ENST00000558937 EVC2Q86UK5 1308 aa21.6■■□□□ 1.05
SMAD6-203ENST00000558937 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
SMAD6-203ENST00000558937 ONECUT3O60422 494 aaPredicted RBP21.59■■□□□ 1.05
SMAD6-203ENST00000558937 USP19O94966 1318 aa21.58■■□□□ 1.05
SMAD6-203ENST00000558937 USP6P35125 1406 aa21.58■■□□□ 1.05
SMAD6-203ENST00000558937 ABTB2Q8N961 1025 aa21.58■■□□□ 1.05
SMAD6-203ENST00000558937 CABP1Q9NZU7 370 aa21.58■■□□□ 1.05
SMAD6-203ENST00000558937 BRD4O60885 1362 aaPredicted RBP21.58■■□□□ 1.04
SMAD6-203ENST00000558937 ZC3H6P61129 1189 aaKnown RBP21.57■■□□□ 1.04
SMAD6-203ENST00000558937 CHRNA2Q15822 529 aa21.57■■□□□ 1.04
SMAD6-203ENST00000558937 SPATA31A5Q5VU36 1347 aa21.55■■□□□ 1.04
SMAD6-203ENST00000558937 SPATA31A7Q8IWB4 1347 aa21.55■■□□□ 1.04
SMAD6-203ENST00000558937 FAM98CQ17RN3 349 aaKnown RBP21.55■■□□□ 1.04
SMAD6-203ENST00000558937 AKAP12Q02952 1782 aa21.55■■□□□ 1.04
SMAD6-203ENST00000558937 THSD7AQ9UPZ6 1657 aa21.54■■□□□ 1.04
SMAD6-203ENST00000558937 A0A0G2JS52 829 aa21.54■■□□□ 1.04
SMAD6-203ENST00000558937 MYT1Q01538 1121 aa21.54■■□□□ 1.04
SMAD6-203ENST00000558937 CCDC125Q86Z20 511 aa21.54■■□□□ 1.04
SMAD6-203ENST00000558937 LMO7Q8WWI1 1683 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 CPDO75976 1380 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 SBNO2Q9Y2G9 1366 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 KRT27Q7Z3Y8 459 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 NLRP13Q86W25 1043 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 CARD11Q9BXL7 1154 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 BLMP54132 1417 aaPredicted RBP21.53■■□□□ 1.04
SMAD6-203ENST00000558937 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
SMAD6-203ENST00000558937 SLIT3O75094 1523 aa21.51■■□□□ 1.03
SMAD6-203ENST00000558937 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
SMAD6-203ENST00000558937 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
SMAD6-203ENST00000558937 GCP02774 474 aa21.49■■□□□ 1.03
SMAD6-203ENST00000558937 EP400Q96L91 3159 aa21.49■■□□□ 1.03
SMAD6-203ENST00000558937 SPATA31A1Q5TZJ5 1347 aa21.49■■□□□ 1.03
SMAD6-203ENST00000558937 MON2Q7Z3U7 1717 aa21.47■■□□□ 1.03
SMAD6-203ENST00000558937 NLRP6P59044 892 aa21.47■■□□□ 1.03
SMAD6-203ENST00000558937 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
SMAD6-203ENST00000558937 TTC21BQ7Z4L5 1316 aa21.45■■□□□ 1.02
SMAD6-203ENST00000558937 EVA1CP58658 441 aa21.44■■□□□ 1.02
SMAD6-203ENST00000558937 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
SMAD6-203ENST00000558937 COL5A2P05997 1499 aaPredicted RBP21.44■■□□□ 1.02
SMAD6-203ENST00000558937 SF3B2Q13435 895 aaKnown RBP21.43■■□□□ 1.02
SMAD6-203ENST00000558937 LARP1Q6PKG0 1096 aaKnown RBP21.43■■□□□ 1.02
SMAD6-203ENST00000558937 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
SMAD6-203ENST00000558937 ZBTB7CA1YPR0 619 aa21.42■■□□□ 1.02
SMAD6-203ENST00000558937 KTN1Q86UP2 1357 aaKnown RBP21.42■■□□□ 1.02
SMAD6-203ENST00000558937 TTC21AQ8NDW8 1320 aa21.42■■□□□ 1.02
SMAD6-203ENST00000558937 USP35Q9P2H5 1018 aa21.42■■□□□ 1.02
SMAD6-203ENST00000558937 COL18A1P39060 1754 aa21.41■■□□□ 1.02
SMAD6-203ENST00000558937 RGPD1P0DJD0 1748 aa21.41■■□□□ 1.02
SMAD6-203ENST00000558937 CD163L1Q9NR16 1453 aa21.41■■□□□ 1.02
SMAD6-203ENST00000558937 AATKQ6ZMQ8 1374 aa21.4■■□□□ 1.02
SMAD6-203ENST00000558937 FAM182BQ5T319 152 aa21.4■■□□□ 1.02
SMAD6-203ENST00000558937 BARGINQ6ZT62 677 aa21.39■■□□□ 1.01
SMAD6-203ENST00000558937 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
SMAD6-203ENST00000558937 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
SMAD6-203ENST00000558937 NFAT5O94916 1531 aa21.38■■□□□ 1.01
SMAD6-203ENST00000558937 TNS1Q9HBL0 1735 aaKnown RBP21.38■■□□□ 1.01
SMAD6-203ENST00000558937 TCP11L2Q8N4U5 519 aa21.37■■□□□ 1.01
SMAD6-203ENST00000558937 CRB1P82279 1406 aa21.37■■□□□ 1.01
SMAD6-203ENST00000558937 PARP4Q9UKK3 1724 aaKnown RBP21.36■■□□□ 1.01
SMAD6-203ENST00000558937 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
SMAD6-203ENST00000558937 BAG6P46379 1132 aa21.35■■□□□ 1.01
SMAD6-203ENST00000558937 KCNH5Q8NCM2 988 aa21.35■■□□□ 1.01
SMAD6-203ENST00000558937 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
SMAD6-203ENST00000558937 SOX12O15370 315 aa21.34■■□□□ 1.01
SMAD6-203ENST00000558937 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
SMAD6-203ENST00000558937 TESK2Q96S53 571 aa21.34■■□□□ 1.01
SMAD6-203ENST00000558937 WNK3Q9BYP7 1800 aa21.34■■□□□ 1.01
SMAD6-203ENST00000558937 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
SMAD6-203ENST00000558937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMAD6-203ENST00000558937 PUS7Q96PZ0 661 aaKnown RBP21.33■■□□□ 1.01
SMAD6-203ENST00000558937 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
SMAD6-203ENST00000558937 THRAP3Q9Y2W1 955 aaKnown RBP21.33■■□□□ 1.01
SMAD6-203ENST00000558937 USP31Q70CQ4 1352 aa21.33■■□□□ 1
SMAD6-203ENST00000558937 HDGFL2Q7Z4V5 671 aaPredicted RBP21.32■■□□□ 1
SMAD6-203ENST00000558937 A0A1W2PP64 1363 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms