RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SKOR1P84550 965 aa8.2□□□□□ -1.1
VPS13C-207ENST00000558919 BAP1Q92560 729 aa8.2□□□□□ -1.1
VPS13C-207ENST00000558919 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
VPS13C-207ENST00000558919 SOCS7O14512 581 aa8.19□□□□□ -1.1
VPS13C-207ENST00000558919 GFRA3O60609 400 aa8.19□□□□□ -1.1
VPS13C-207ENST00000558919 SH3BP2P78314 561 aa8.19□□□□□ -1.1
VPS13C-207ENST00000558919 ZNF511Q8NB15 262 aa8.19□□□□□ -1.1
VPS13C-207ENST00000558919 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
VPS13C-207ENST00000558919 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
VPS13C-207ENST00000558919 FOXC1Q12948 553 aa8.18□□□□□ -1.1
VPS13C-207ENST00000558919 NR6A1Q15406 480 aa8.18□□□□□ -1.1
VPS13C-207ENST00000558919 RC3H1Q5TC82 1133 aaKnown RBP8.18□□□□□ -1.1
VPS13C-207ENST00000558919 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
VPS13C-207ENST00000558919 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
VPS13C-207ENST00000558919 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
VPS13C-207ENST00000558919 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
VPS13C-207ENST00000558919 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
VPS13C-207ENST00000558919 TNFRSF10AO00220 468 aa8.16□□□□□ -1.1
VPS13C-207ENST00000558919 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
VPS13C-207ENST00000558919 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
VPS13C-207ENST00000558919 MRGPRX2Q96LB1 330 aa8.15□□□□□ -1.1
VPS13C-207ENST00000558919 VARSP26640 1264 aaKnown RBP8.14□□□□□ -1.11
VPS13C-207ENST00000558919 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 Q6ZNB5 142 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
VPS13C-207ENST00000558919 CYP4X1Q8N118 509 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 EHBP1Q8NDI1 1231 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
VPS13C-207ENST00000558919 TRIM34Q9BYJ4 488 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 TOR4AQ9NXH8 423 aa8.14□□□□□ -1.11
VPS13C-207ENST00000558919 APBB1O00213 710 aa8.13□□□□□ -1.11
VPS13C-207ENST00000558919 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
VPS13C-207ENST00000558919 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
VPS13C-207ENST00000558919 SIAH2O43255 324 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 MPNDQ8N594 471 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
VPS13C-207ENST00000558919 TTC24A2A3L6 582 aaPredicted RBP8.11□□□□□ -1.11
VPS13C-207ENST00000558919 AGERQ15109 404 aa8.11□□□□□ -1.11
VPS13C-207ENST00000558919 GPSM3Q9Y4H4 160 aa8.11□□□□□ -1.11
VPS13C-207ENST00000558919 FAM174AQ8TBP5 190 aa8.1□□□□□ -1.11
VPS13C-207ENST00000558919 DGAT1O75907 488 aa8.09□□□□□ -1.11
VPS13C-207ENST00000558919 PTK2Q05397 1052 aa8.09□□□□□ -1.11
VPS13C-207ENST00000558919 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
VPS13C-207ENST00000558919 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
VPS13C-207ENST00000558919 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
VPS13C-207ENST00000558919 FAM187AA6NFU0 413 aa8.08□□□□□ -1.12
VPS13C-207ENST00000558919 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
VPS13C-207ENST00000558919 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
VPS13C-207ENST00000558919 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
VPS13C-207ENST00000558919 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
VPS13C-207ENST00000558919 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
VPS13C-207ENST00000558919 MAGEB6P1A0A0J9YX57 407 aa8.06□□□□□ -1.12
VPS13C-207ENST00000558919 J3QL48 77 aa8.06□□□□□ -1.12
VPS13C-207ENST00000558919 ALDH1A1P00352 501 aa8.06□□□□□ -1.12
VPS13C-207ENST00000558919 SMPD1P17405 629 aa8.06□□□□□ -1.12
VPS13C-207ENST00000558919 MCM6Q14566 821 aa8.06□□□□□ -1.12
VPS13C-207ENST00000558919 AVPP01185 164 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 FLIIQ13045 1269 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 CARD14Q9BXL6 1004 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
VPS13C-207ENST00000558919 MAP4K5Q9Y4K4 846 aa8.04□□□□□ -1.12
VPS13C-207ENST00000558919 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
VPS13C-207ENST00000558919 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
VPS13C-207ENST00000558919 GPR37L1O60883 481 aa8.03□□□□□ -1.12
VPS13C-207ENST00000558919 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
VPS13C-207ENST00000558919 ADH1CP00326 375 aa8.02□□□□□ -1.13
VPS13C-207ENST00000558919 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
VPS13C-207ENST00000558919 ADAM32Q8TC27 787 aa8.02□□□□□ -1.13
VPS13C-207ENST00000558919 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
VPS13C-207ENST00000558919 MYT1Q01538 1121 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 NR1H3Q13133 447 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 NR5A1Q13285 461 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 ARID5BQ14865 1188 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 CRIPAKQ8N1N5 446 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 SLC10A4Q96EP9 437 aa8.01□□□□□ -1.13
VPS13C-207ENST00000558919 FBXO45P0C2W1 286 aa8□□□□□ -1.13
VPS13C-207ENST00000558919 GRM5P41594 1212 aa8□□□□□ -1.13
VPS13C-207ENST00000558919 SMCPP49901 116 aaPredicted RBP8□□□□□ -1.13
VPS13C-207ENST00000558919 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
VPS13C-207ENST00000558919 HPS1Q92902 700 aa8□□□□□ -1.13
VPS13C-207ENST00000558919 LCE2BO14633 110 aa7.99□□□□□ -1.13
VPS13C-207ENST00000558919 NNTQ13423 1086 aa7.99□□□□□ -1.13
VPS13C-207ENST00000558919 ZNF592Q92610 1267 aa7.99□□□□□ -1.13
VPS13C-207ENST00000558919 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
VPS13C-207ENST00000558919 ZNF330Q9Y3S2 320 aaPredicted RBP7.99□□□□□ -1.13
VPS13C-207ENST00000558919 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
VPS13C-207ENST00000558919 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
VPS13C-207ENST00000558919 COG6Q9Y2V7 657 aa7.98□□□□□ -1.13
VPS13C-207ENST00000558919 AXIN1O15169 862 aa7.97□□□□□ -1.13
VPS13C-207ENST00000558919 IRF5Q13568 498 aa7.97□□□□□ -1.13
VPS13C-207ENST00000558919 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
VPS13C-207ENST00000558919 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms