RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 AKAP12Q02952 1782 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 NRKQ7Z2Y5 1582 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
SMAD3-209ENST00000558894 SIN3AQ96ST3 1273 aa8.09□□□□□ -1.11
SMAD3-209ENST00000558894 CDK19Q9BWU1 502 aa8.09□□□□□ -1.11
SMAD3-209ENST00000558894 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
SMAD3-209ENST00000558894 VPS72Q15906 364 aa8.08□□□□□ -1.12
SMAD3-209ENST00000558894 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
SMAD3-209ENST00000558894 COL18A1P39060 1754 aa8.07□□□□□ -1.12
SMAD3-209ENST00000558894 TNS1Q9HBL0 1735 aaKnown RBP8.07□□□□□ -1.12
SMAD3-209ENST00000558894 GPRASP1Q5JY77 1395 aa8.07□□□□□ -1.12
SMAD3-209ENST00000558894 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
SMAD3-209ENST00000558894 ACEP12821 1306 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 PLEKHG5O94827 1062 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 NBPF8Q3BBV2 869 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 LMOD2Q6P5Q4 547 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 MON2Q7Z3U7 1717 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 WNK3Q9BYP7 1800 aa8.06□□□□□ -1.12
SMAD3-209ENST00000558894 CAMTA1Q9Y6Y1 1673 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 NGDNQ8NEJ9 315 aaKnown RBP8.05□□□□□ -1.12
SMAD3-209ENST00000558894 BTG4Q9NY30 223 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 CCDC61Q9Y6R9 512 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 USP54Q70EL1 1684 aa8.05□□□□□ -1.12
SMAD3-209ENST00000558894 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
SMAD3-209ENST00000558894 SLIT3O75094 1523 aa8.04□□□□□ -1.12
SMAD3-209ENST00000558894 CABP2Q9NPB3 220 aa8.04□□□□□ -1.12
SMAD3-209ENST00000558894 KIAA0232Q92628 1395 aa8.04□□□□□ -1.12
SMAD3-209ENST00000558894 USP19O94966 1318 aa8.03□□□□□ -1.12
SMAD3-209ENST00000558894 SPATA31A5Q5VU36 1347 aa8.03□□□□□ -1.12
SMAD3-209ENST00000558894 SPATA31A7Q8IWB4 1347 aa8.03□□□□□ -1.12
SMAD3-209ENST00000558894 BLMP54132 1417 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-209ENST00000558894 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
SMAD3-209ENST00000558894 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
SMAD3-209ENST00000558894 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
SMAD3-209ENST00000558894 USP6P35125 1406 aa8.03□□□□□ -1.12
SMAD3-209ENST00000558894 CPDO75976 1380 aa8.02□□□□□ -1.13
SMAD3-209ENST00000558894 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
SMAD3-209ENST00000558894 PAK3O75914 559 aaPredicted RBP8.02□□□□□ -1.13
SMAD3-209ENST00000558894 PEAK1Q9H792 1746 aa8.02□□□□□ -1.13
SMAD3-209ENST00000558894 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
SMAD3-209ENST00000558894 CD163L1Q9NR16 1453 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 BRD4O60885 1362 aaPredicted RBP8.01□□□□□ -1.13
SMAD3-209ENST00000558894 NEUROD1Q13562 356 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 CHRNA2Q15822 529 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 FAM98CQ17RN3 349 aaKnown RBP8.01□□□□□ -1.13
SMAD3-209ENST00000558894 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 KRT27Q7Z3Y8 459 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 CPSF1Q10570 1443 aaKnown RBP8.01□□□□□ -1.13
SMAD3-209ENST00000558894 RREB1Q92766 1687 aa8.01□□□□□ -1.13
SMAD3-209ENST00000558894 LTN1O94822 1766 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 CEP350Q5VT06 3117 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 ZC3H6P61129 1189 aaKnown RBP8□□□□□ -1.13
SMAD3-209ENST00000558894 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
SMAD3-209ENST00000558894 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 PRDM11Q9NQV5 511 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 CABP1Q9NZU7 370 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 COL5A2P05997 1499 aaPredicted RBP8□□□□□ -1.13
SMAD3-209ENST00000558894 LRRC37A3O60309 1634 aa8□□□□□ -1.13
SMAD3-209ENST00000558894 ROCK2O75116 1388 aaKnown RBP7.99□□□□□ -1.13
SMAD3-209ENST00000558894 SBNO2Q9Y2G9 1366 aa7.99□□□□□ -1.13
SMAD3-209ENST00000558894 NFAT5O94916 1531 aa7.99□□□□□ -1.13
SMAD3-209ENST00000558894 FAM182BQ5T319 152 aa7.99□□□□□ -1.13
SMAD3-209ENST00000558894 ABTB2Q8N961 1025 aa7.99□□□□□ -1.13
SMAD3-209ENST00000558894 NUP188Q5SRE5 1749 aa7.98□□□□□ -1.13
SMAD3-209ENST00000558894 GCP02774 474 aa7.98□□□□□ -1.13
SMAD3-209ENST00000558894 CCDC9Q9Y3X0 531 aaKnown RBP7.98□□□□□ -1.13
SMAD3-209ENST00000558894 LRP5O75197 1615 aa7.98□□□□□ -1.13
SMAD3-209ENST00000558894 EVC2Q86UK5 1308 aa7.98□□□□□ -1.13
SMAD3-209ENST00000558894 DISP2A7MBM2 1401 aa7.97□□□□□ -1.13
SMAD3-209ENST00000558894 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
SMAD3-209ENST00000558894 BARGINQ6ZT62 677 aa7.97□□□□□ -1.13
SMAD3-209ENST00000558894 NLRP13Q86W25 1043 aa7.97□□□□□ -1.13
SMAD3-209ENST00000558894 RGPD3A6NKT7 1758 aaPredicted RBP7.97□□□□□ -1.13
SMAD3-209ENST00000558894 RGPD4Q7Z3J3 1758 aa7.97□□□□□ -1.13
SMAD3-209ENST00000558894 STRN4Q9NRL3 753 aa7.96□□□□□ -1.14
SMAD3-209ENST00000558894 AXIN2Q9Y2T1 843 aa7.96□□□□□ -1.14
SMAD3-209ENST00000558894 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.14
SMAD3-209ENST00000558894 AATKQ6ZMQ8 1374 aa7.96□□□□□ -1.14
SMAD3-209ENST00000558894 CRB1P82279 1406 aa7.95□□□□□ -1.14
SMAD3-209ENST00000558894 ABCC6O95255 1503 aa7.95□□□□□ -1.14
SMAD3-209ENST00000558894 ZRANB1Q9UGI0 708 aa7.95□□□□□ -1.14
SMAD3-209ENST00000558894 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
SMAD3-209ENST00000558894 NLRP6P59044 892 aa7.94□□□□□ -1.14
SMAD3-209ENST00000558894 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
SMAD3-209ENST00000558894 TESK2Q96S53 571 aa7.94□□□□□ -1.14
SMAD3-209ENST00000558894 ZNF692Q9BU19 519 aaPredicted RBP7.94□□□□□ -1.14
SMAD3-209ENST00000558894 KTN1Q86UP2 1357 aaKnown RBP7.94□□□□□ -1.14
SMAD3-209ENST00000558894 RGPD2P0DJD1 1756 aa7.94□□□□□ -1.14
SMAD3-209ENST00000558894 MYOM1P52179 1685 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-209ENST00000558894 TCP11L2Q8N4U5 519 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 CAMKK2Q96RR4 588 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 CARD11Q9BXL7 1154 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 USP35Q9P2H5 1018 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms