RNA–Protein interactions for RNA: ENST00000558869.1

ALDH1A3-205, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-205ENST00000558869 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
ALDH1A3-205ENST00000558869 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
ALDH1A3-205ENST00000558869 ACEP12821 1306 aa21.11■□□□□ 0.97
ALDH1A3-205ENST00000558869 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
ALDH1A3-205ENST00000558869 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
ALDH1A3-205ENST00000558869 UPF1Q92900 1129 aaKnown RBP eCLIP21.1■□□□□ 0.97
ALDH1A3-205ENST00000558869 GJD4Q96KN9 370 aaPredicted RBP21.1■□□□□ 0.97
ALDH1A3-205ENST00000558869 PPIP5K1Q6PFW1 1433 aa21.09■□□□□ 0.97
ALDH1A3-205ENST00000558869 COL14A1Q05707 1796 aaKnown RBP21.08■□□□□ 0.97
ALDH1A3-205ENST00000558869 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
ALDH1A3-205ENST00000558869 GLI3P10071 1580 aa21.08■□□□□ 0.97
ALDH1A3-205ENST00000558869 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
ALDH1A3-205ENST00000558869 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
ALDH1A3-205ENST00000558869 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
ALDH1A3-205ENST00000558869 NRAPQ86VF7 1730 aa21.07■□□□□ 0.96
ALDH1A3-205ENST00000558869 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
ALDH1A3-205ENST00000558869 FAM83GA6ND36 823 aa21.06■□□□□ 0.96
ALDH1A3-205ENST00000558869 BRD4O60885 1362 aaPredicted RBP21.05■□□□□ 0.96
ALDH1A3-205ENST00000558869 VPS72Q15906 364 aa21.04■□□□□ 0.96
ALDH1A3-205ENST00000558869 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
ALDH1A3-205ENST00000558869 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
ALDH1A3-205ENST00000558869 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
ALDH1A3-205ENST00000558869 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
ALDH1A3-205ENST00000558869 BTG4Q9NY30 223 aa21■□□□□ 0.95
ALDH1A3-205ENST00000558869 EP400Q96L91 3159 aa20.99■□□□□ 0.95
ALDH1A3-205ENST00000558869 BRWD3Q6RI45 1802 aa20.99■□□□□ 0.95
ALDH1A3-205ENST00000558869 USP6P35125 1406 aa20.99■□□□□ 0.95
ALDH1A3-205ENST00000558869 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
ALDH1A3-205ENST00000558869 AKAP12Q02952 1782 aa20.99■□□□□ 0.95
ALDH1A3-205ENST00000558869 NRKQ7Z2Y5 1582 aa20.98■□□□□ 0.95
ALDH1A3-205ENST00000558869 PRDM11Q9NQV5 511 aa20.98■□□□□ 0.95
ALDH1A3-205ENST00000558869 ONECUT3O60422 494 aaPredicted RBP20.97■□□□□ 0.95
ALDH1A3-205ENST00000558869 USP19O94966 1318 aa20.97■□□□□ 0.95
ALDH1A3-205ENST00000558869 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
ALDH1A3-205ENST00000558869 NUTM2GQ5VZR2 741 aa20.96■□□□□ 0.95
ALDH1A3-205ENST00000558869 NLRP13Q86W25 1043 aa20.96■□□□□ 0.95
ALDH1A3-205ENST00000558869 SSH2Q76I76 1423 aa20.95■□□□□ 0.95
ALDH1A3-205ENST00000558869 CCDC9Q9Y3X0 531 aaKnown RBP20.95■□□□□ 0.94
ALDH1A3-205ENST00000558869 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
ALDH1A3-205ENST00000558869 CPDO75976 1380 aa20.94■□□□□ 0.94
ALDH1A3-205ENST00000558869 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
ALDH1A3-205ENST00000558869 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
ALDH1A3-205ENST00000558869 PIK3C2AO00443 1686 aa20.92■□□□□ 0.94
ALDH1A3-205ENST00000558869 ZC3H6P61129 1189 aaKnown RBP20.91■□□□□ 0.94
ALDH1A3-205ENST00000558869 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
ALDH1A3-205ENST00000558869 MON2Q7Z3U7 1717 aa20.91■□□□□ 0.94
ALDH1A3-205ENST00000558869 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
ALDH1A3-205ENST00000558869 LMO7Q8WWI1 1683 aa20.9■□□□□ 0.94
ALDH1A3-205ENST00000558869 SLIT3O75094 1523 aa20.9■□□□□ 0.94
ALDH1A3-205ENST00000558869 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
ALDH1A3-205ENST00000558869 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
ALDH1A3-205ENST00000558869 GCP02774 474 aa20.89■□□□□ 0.93
ALDH1A3-205ENST00000558869 CCDC125Q86Z20 511 aa20.89■□□□□ 0.93
ALDH1A3-205ENST00000558869 NLRP6P59044 892 aa20.88■□□□□ 0.93
ALDH1A3-205ENST00000558869 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
ALDH1A3-205ENST00000558869 THSD7AQ9UPZ6 1657 aa20.87■□□□□ 0.93
ALDH1A3-205ENST00000558869 CAMTA1Q9Y6Y1 1673 aa20.87■□□□□ 0.93
ALDH1A3-205ENST00000558869 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
ALDH1A3-205ENST00000558869 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
ALDH1A3-205ENST00000558869 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
ALDH1A3-205ENST00000558869 FAM98CQ17RN3 349 aaKnown RBP20.86■□□□□ 0.93
ALDH1A3-205ENST00000558869 KRT27Q7Z3Y8 459 aa20.86■□□□□ 0.93
ALDH1A3-205ENST00000558869 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
ALDH1A3-205ENST00000558869 SPATA31A1Q5TZJ5 1347 aa20.85■□□□□ 0.93
ALDH1A3-205ENST00000558869 SLC24A1O60721 1099 aa20.85■□□□□ 0.93
ALDH1A3-205ENST00000558869 CD163L1Q9NR16 1453 aa20.84■□□□□ 0.93
ALDH1A3-205ENST00000558869 TESK2Q96S53 571 aa20.84■□□□□ 0.93
ALDH1A3-205ENST00000558869 STRN4Q9NRL3 753 aa20.84■□□□□ 0.93
ALDH1A3-205ENST00000558869 ST20-MTHFSA0A0A6YYL1 179 aa20.83■□□□□ 0.93
ALDH1A3-205ENST00000558869 A0A0G2JS52 829 aa20.83■□□□□ 0.93
ALDH1A3-205ENST00000558869 MYT1Q01538 1121 aa20.83■□□□□ 0.93
ALDH1A3-205ENST00000558869 BLMP54132 1417 aaPredicted RBP20.83■□□□□ 0.93
ALDH1A3-205ENST00000558869 USP54Q70EL1 1684 aa20.83■□□□□ 0.92
ALDH1A3-205ENST00000558869 EVA1CP58658 441 aa20.82■□□□□ 0.92
ALDH1A3-205ENST00000558869 AATKQ6ZMQ8 1374 aa20.82■□□□□ 0.92
ALDH1A3-205ENST00000558869 COL18A1P39060 1754 aa20.82■□□□□ 0.92
ALDH1A3-205ENST00000558869 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
ALDH1A3-205ENST00000558869 KCNH5Q8NCM2 988 aa20.8■□□□□ 0.92
ALDH1A3-205ENST00000558869 BARGINQ6ZT62 677 aa20.79■□□□□ 0.92
ALDH1A3-205ENST00000558869 TMC1Q8TDI8 760 aa20.79■□□□□ 0.92
ALDH1A3-205ENST00000558869 SLC12A5Q9H2X9 1139 aa20.79■□□□□ 0.92
ALDH1A3-205ENST00000558869 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
ALDH1A3-205ENST00000558869 USP31Q70CQ4 1352 aa20.78■□□□□ 0.92
ALDH1A3-205ENST00000558869 USP47Q96K76 1375 aa20.78■□□□□ 0.92
ALDH1A3-205ENST00000558869 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
ALDH1A3-205ENST00000558869 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
ALDH1A3-205ENST00000558869 LARP1Q6PKG0 1096 aaKnown RBP20.77■□□□□ 0.92
ALDH1A3-205ENST00000558869 NFAT5O94916 1531 aa20.77■□□□□ 0.92
ALDH1A3-205ENST00000558869 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
ALDH1A3-205ENST00000558869 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
ALDH1A3-205ENST00000558869 ARHGEF25Q86VW2 580 aa20.76■□□□□ 0.91
ALDH1A3-205ENST00000558869 THRAP3Q9Y2W1 955 aaKnown RBP20.76■□□□□ 0.91
ALDH1A3-205ENST00000558869 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
ALDH1A3-205ENST00000558869 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
ALDH1A3-205ENST00000558869 CRB1P82279 1406 aa20.75■□□□□ 0.91
ALDH1A3-205ENST00000558869 ABCC6O95255 1503 aa20.74■□□□□ 0.91
ALDH1A3-205ENST00000558869 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
ALDH1A3-205ENST00000558869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.74■□□□□ 0.91
ALDH1A3-205ENST00000558869 USP35Q9P2H5 1018 aa20.74■□□□□ 0.91
ALDH1A3-205ENST00000558869 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms