RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 BRWD3Q6RI45 1802 aa17.19■□□□□ 0.34
SEMA4B-205ENST00000558848 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
SEMA4B-205ENST00000558848 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
SEMA4B-205ENST00000558848 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
SEMA4B-205ENST00000558848 BTG4Q9NY30 223 aa17.18■□□□□ 0.34
SEMA4B-205ENST00000558848 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
SEMA4B-205ENST00000558848 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
SEMA4B-205ENST00000558848 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
SEMA4B-205ENST00000558848 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
SEMA4B-205ENST00000558848 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
SEMA4B-205ENST00000558848 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
SEMA4B-205ENST00000558848 SPATA31A5Q5VU36 1347 aa17.15■□□□□ 0.34
SEMA4B-205ENST00000558848 SPATA31A7Q8IWB4 1347 aa17.15■□□□□ 0.34
SEMA4B-205ENST00000558848 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
SEMA4B-205ENST00000558848 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
SEMA4B-205ENST00000558848 ACEP12821 1306 aa17.14■□□□□ 0.33
SEMA4B-205ENST00000558848 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
SEMA4B-205ENST00000558848 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
SEMA4B-205ENST00000558848 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
SEMA4B-205ENST00000558848 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
SEMA4B-205ENST00000558848 PRDM11Q9NQV5 511 aa17.11■□□□□ 0.33
SEMA4B-205ENST00000558848 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
SEMA4B-205ENST00000558848 USP19O94966 1318 aa17.1■□□□□ 0.33
SEMA4B-205ENST00000558848 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
SEMA4B-205ENST00000558848 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
SEMA4B-205ENST00000558848 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
SEMA4B-205ENST00000558848 SPATA31A1Q5TZJ5 1347 aa17.09■□□□□ 0.33
SEMA4B-205ENST00000558848 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.32
SEMA4B-205ENST00000558848 CPDO75976 1380 aa17.08■□□□□ 0.32
SEMA4B-205ENST00000558848 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
SEMA4B-205ENST00000558848 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
SEMA4B-205ENST00000558848 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
SEMA4B-205ENST00000558848 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
SEMA4B-205ENST00000558848 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
SEMA4B-205ENST00000558848 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
SEMA4B-205ENST00000558848 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
SEMA4B-205ENST00000558848 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
SEMA4B-205ENST00000558848 GCP02774 474 aa17.03■□□□□ 0.32
SEMA4B-205ENST00000558848 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
SEMA4B-205ENST00000558848 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
SEMA4B-205ENST00000558848 A0A0G2JS52 829 aa17.02■□□□□ 0.32
SEMA4B-205ENST00000558848 MYT1Q01538 1121 aa17.02■□□□□ 0.32
SEMA4B-205ENST00000558848 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
SEMA4B-205ENST00000558848 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.31
SEMA4B-205ENST00000558848 USP6P35125 1406 aa17.02■□□□□ 0.31
SEMA4B-205ENST00000558848 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
SEMA4B-205ENST00000558848 BAG6P46379 1132 aa17.01■□□□□ 0.31
SEMA4B-205ENST00000558848 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
SEMA4B-205ENST00000558848 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
SEMA4B-205ENST00000558848 STRN4Q9NRL3 753 aa17■□□□□ 0.31
SEMA4B-205ENST00000558848 SLIT3O75094 1523 aa16.99■□□□□ 0.31
SEMA4B-205ENST00000558848 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
SEMA4B-205ENST00000558848 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
SEMA4B-205ENST00000558848 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
SEMA4B-205ENST00000558848 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
SEMA4B-205ENST00000558848 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
SEMA4B-205ENST00000558848 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
SEMA4B-205ENST00000558848 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
SEMA4B-205ENST00000558848 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.31
SEMA4B-205ENST00000558848 EVA1CP58658 441 aa16.96■□□□□ 0.31
SEMA4B-205ENST00000558848 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
SEMA4B-205ENST00000558848 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
SEMA4B-205ENST00000558848 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
SEMA4B-205ENST00000558848 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
SEMA4B-205ENST00000558848 LRP5O75197 1615 aa16.95■□□□□ 0.3
SEMA4B-205ENST00000558848 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
SEMA4B-205ENST00000558848 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
SEMA4B-205ENST00000558848 NLRP6P59044 892 aa16.94■□□□□ 0.3
SEMA4B-205ENST00000558848 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
SEMA4B-205ENST00000558848 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
SEMA4B-205ENST00000558848 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
SEMA4B-205ENST00000558848 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
SEMA4B-205ENST00000558848 CRB1P82279 1406 aa16.93■□□□□ 0.3
SEMA4B-205ENST00000558848 PARD3Q8TEW0 1356 aa16.92■□□□□ 0.3
SEMA4B-205ENST00000558848 TRIM37O94972 964 aa16.92■□□□□ 0.3
SEMA4B-205ENST00000558848 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
SEMA4B-205ENST00000558848 COL18A1P39060 1754 aa16.92■□□□□ 0.3
SEMA4B-205ENST00000558848 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
SEMA4B-205ENST00000558848 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 ARHGEF25Q86VW2 580 aa16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
SEMA4B-205ENST00000558848 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
SEMA4B-205ENST00000558848 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
SEMA4B-205ENST00000558848 APBA3O96018 575 aa16.87■□□□□ 0.29
SEMA4B-205ENST00000558848 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
SEMA4B-205ENST00000558848 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
SEMA4B-205ENST00000558848 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
SEMA4B-205ENST00000558848 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
SEMA4B-205ENST00000558848 NFAT5O94916 1531 aa16.86■□□□□ 0.29
SEMA4B-205ENST00000558848 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
SEMA4B-205ENST00000558848 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
SEMA4B-205ENST00000558848 BCL9O00512 1426 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms