RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 HIRIP3Q9BW71 556 aaPredicted RBP19.32■□□□□ 0.68
TMED3-205ENST00000558562 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
TMED3-205ENST00000558562 TRPM3Q9HCF6 1732 aaPredicted RBP19.31■□□□□ 0.68
TMED3-205ENST00000558562 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
TMED3-205ENST00000558562 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
TMED3-205ENST00000558562 EZH2Q15910 746 aaKnown RBP19.31■□□□□ 0.68
TMED3-205ENST00000558562 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
TMED3-205ENST00000558562 TIMELESSQ9UNS1 1208 aa19.29■□□□□ 0.68
TMED3-205ENST00000558562 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
TMED3-205ENST00000558562 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
TMED3-205ENST00000558562 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
TMED3-205ENST00000558562 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
TMED3-205ENST00000558562 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
TMED3-205ENST00000558562 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.67
TMED3-205ENST00000558562 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
TMED3-205ENST00000558562 DISP2A7MBM2 1401 aa19.26■□□□□ 0.67
TMED3-205ENST00000558562 TRIM37O94972 964 aa19.26■□□□□ 0.67
TMED3-205ENST00000558562 PRDM11Q9NQV5 511 aa19.26■□□□□ 0.67
TMED3-205ENST00000558562 TRAK1Q9UPV9 953 aa19.26■□□□□ 0.67
TMED3-205ENST00000558562 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
TMED3-205ENST00000558562 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
TMED3-205ENST00000558562 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
TMED3-205ENST00000558562 CHRNA2Q15822 529 aa19.24■□□□□ 0.67
TMED3-205ENST00000558562 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
TMED3-205ENST00000558562 CAMKK2Q96RR4 588 aa19.24■□□□□ 0.67
TMED3-205ENST00000558562 CRYBG1Q9Y4K1 1723 aa19.23■□□□□ 0.67
TMED3-205ENST00000558562 STRN4Q9NRL3 753 aa19.23■□□□□ 0.67
TMED3-205ENST00000558562 SPATA31A1Q5TZJ5 1347 aa19.23■□□□□ 0.67
TMED3-205ENST00000558562 APBA3O96018 575 aa19.22■□□□□ 0.67
TMED3-205ENST00000558562 KIAA0232Q92628 1395 aa19.21■□□□□ 0.67
TMED3-205ENST00000558562 FAM196AQ6ZSG2 479 aa19.21■□□□□ 0.67
TMED3-205ENST00000558562 USP35Q9P2H5 1018 aa19.21■□□□□ 0.67
TMED3-205ENST00000558562 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
TMED3-205ENST00000558562 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
TMED3-205ENST00000558562 WASLO00401 505 aaPredicted RBP19.2■□□□□ 0.66
TMED3-205ENST00000558562 ZC3H6P61129 1189 aaKnown RBP19.19■□□□□ 0.66
TMED3-205ENST00000558562 NUTM2GQ5VZR2 741 aa19.18■□□□□ 0.66
TMED3-205ENST00000558562 EIF3AQ14152 1382 aaKnown RBP19.18■□□□□ 0.66
TMED3-205ENST00000558562 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
TMED3-205ENST00000558562 YY1P25490 414 aa19.17■□□□□ 0.66
TMED3-205ENST00000558562 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
TMED3-205ENST00000558562 EVA1CP58658 441 aa19.14■□□□□ 0.65
TMED3-205ENST00000558562 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
TMED3-205ENST00000558562 PARD3Q8TEW0 1356 aa19.14■□□□□ 0.65
TMED3-205ENST00000558562 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.65
TMED3-205ENST00000558562 RREB1Q92766 1687 aa19.13■□□□□ 0.65
TMED3-205ENST00000558562 NUP188Q5SRE5 1749 aa19.13■□□□□ 0.65
TMED3-205ENST00000558562 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
TMED3-205ENST00000558562 NBPF14Q5TI25 921 aa19.12■□□□□ 0.65
TMED3-205ENST00000558562 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
TMED3-205ENST00000558562 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
TMED3-205ENST00000558562 LARP1Q6PKG0 1096 aaKnown RBP19.11■□□□□ 0.65
TMED3-205ENST00000558562 ATP7BP35670 1465 aa19.1■□□□□ 0.65
TMED3-205ENST00000558562 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
TMED3-205ENST00000558562 DCAF11Q8TEB1 546 aa19.1■□□□□ 0.65
TMED3-205ENST00000558562 PPP1R1BQ9UD71 204 aaPredicted RBP19.1■□□□□ 0.65
TMED3-205ENST00000558562 ITSN1Q15811 1721 aa19.09■□□□□ 0.65
TMED3-205ENST00000558562 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.65
TMED3-205ENST00000558562 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.64
TMED3-205ENST00000558562 SPON1Q9HCB6 807 aa19.07■□□□□ 0.64
TMED3-205ENST00000558562 ACEP12821 1306 aa19.06■□□□□ 0.64
TMED3-205ENST00000558562 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
TMED3-205ENST00000558562 ARHGEF28Q8N1W1 1705 aaKnown RBP19.05■□□□□ 0.64
TMED3-205ENST00000558562 KCNQ2O43526 872 aa19.05■□□□□ 0.64
TMED3-205ENST00000558562 ABTB2Q8N961 1025 aa19.05■□□□□ 0.64
TMED3-205ENST00000558562 NRKQ7Z2Y5 1582 aa19.05■□□□□ 0.64
TMED3-205ENST00000558562 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
TMED3-205ENST00000558562 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
TMED3-205ENST00000558562 LMO7Q8WWI1 1683 aa19.02■□□□□ 0.64
TMED3-205ENST00000558562 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
TMED3-205ENST00000558562 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
TMED3-205ENST00000558562 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
TMED3-205ENST00000558562 ZBTB7CA1YPR0 619 aa19■□□□□ 0.63
TMED3-205ENST00000558562 THRAP3Q9Y2W1 955 aaKnown RBP19■□□□□ 0.63
TMED3-205ENST00000558562 CPDO75976 1380 aa19■□□□□ 0.63
TMED3-205ENST00000558562 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
TMED3-205ENST00000558562 USP19O94966 1318 aa19■□□□□ 0.63
TMED3-205ENST00000558562 PARP4Q9UKK3 1724 aaKnown RBP18.99■□□□□ 0.63
TMED3-205ENST00000558562 COL5A2P05997 1499 aaPredicted RBP18.98■□□□□ 0.63
TMED3-205ENST00000558562 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
TMED3-205ENST00000558562 GCP02774 474 aa18.98■□□□□ 0.63
TMED3-205ENST00000558562 PTF1AQ7RTS3 328 aa18.98■□□□□ 0.63
TMED3-205ENST00000558562 PDGFDQ9GZP0 370 aaPredicted RBP18.98■□□□□ 0.63
TMED3-205ENST00000558562 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
TMED3-205ENST00000558562 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
TMED3-205ENST00000558562 NLRP13Q86W25 1043 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 UTRNP46939 3433 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 PEAK1Q9H792 1746 aa18.96■□□□□ 0.63
TMED3-205ENST00000558562 CRB1P82279 1406 aa18.95■□□□□ 0.62
TMED3-205ENST00000558562 PLSCR1O15162 318 aa18.94■□□□□ 0.62
TMED3-205ENST00000558562 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
TMED3-205ENST00000558562 STAC3Q96MF2 364 aa18.94■□□□□ 0.62
TMED3-205ENST00000558562 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
TMED3-205ENST00000558562 BCL11BQ9C0K0 894 aaPredicted RBP18.93■□□□□ 0.62
TMED3-205ENST00000558562 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
TMED3-205ENST00000558562 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
TMED3-205ENST00000558562 PPIP5K1Q6PFW1 1433 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms