RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 THSD7AQ9UPZ6 1657 aa21.72■■□□□ 1.07
IDH3A-205ENST00000558509 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
IDH3A-205ENST00000558509 STAC3Q96MF2 364 aa21.71■■□□□ 1.07
IDH3A-205ENST00000558509 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
IDH3A-205ENST00000558509 NRKQ7Z2Y5 1582 aa21.7■■□□□ 1.06
IDH3A-205ENST00000558509 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
IDH3A-205ENST00000558509 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
IDH3A-205ENST00000558509 BTG4Q9NY30 223 aa21.7■■□□□ 1.06
IDH3A-205ENST00000558509 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
IDH3A-205ENST00000558509 DEFB132Q7Z7B7 95 aa21.69■■□□□ 1.06
IDH3A-205ENST00000558509 CDK19Q9BWU1 502 aa21.69■■□□□ 1.06
IDH3A-205ENST00000558509 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
IDH3A-205ENST00000558509 POLR3AO14802 1390 aaPredicted RBP21.67■■□□□ 1.06
IDH3A-205ENST00000558509 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
IDH3A-205ENST00000558509 FAM98CQ17RN3 349 aaKnown RBP21.66■■□□□ 1.06
IDH3A-205ENST00000558509 TNS1Q9HBL0 1735 aaKnown RBP21.66■■□□□ 1.06
IDH3A-205ENST00000558509 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
IDH3A-205ENST00000558509 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
IDH3A-205ENST00000558509 ACEP12821 1306 aa21.64■■□□□ 1.05
IDH3A-205ENST00000558509 LMO7Q8WWI1 1683 aa21.64■■□□□ 1.05
IDH3A-205ENST00000558509 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.05
IDH3A-205ENST00000558509 CCDC125Q86Z20 511 aa21.64■■□□□ 1.05
IDH3A-205ENST00000558509 SPATA31A5Q5VU36 1347 aa21.63■■□□□ 1.05
IDH3A-205ENST00000558509 SPATA31A7Q8IWB4 1347 aa21.63■■□□□ 1.05
IDH3A-205ENST00000558509 CHRNA2Q15822 529 aa21.63■■□□□ 1.05
IDH3A-205ENST00000558509 RGPD1P0DJD0 1748 aa21.63■■□□□ 1.05
IDH3A-205ENST00000558509 FAM182BQ5T319 152 aa21.62■■□□□ 1.05
IDH3A-205ENST00000558509 PRDM11Q9NQV5 511 aa21.61■■□□□ 1.05
IDH3A-205ENST00000558509 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
IDH3A-205ENST00000558509 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
IDH3A-205ENST00000558509 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
IDH3A-205ENST00000558509 A0A0G2JS52 829 aa21.59■■□□□ 1.05
IDH3A-205ENST00000558509 PLEKHG3A1L390 1219 aa21.59■■□□□ 1.05
IDH3A-205ENST00000558509 MYT1Q01538 1121 aa21.59■■□□□ 1.05
IDH3A-205ENST00000558509 PPIP5K1Q6PFW1 1433 aa21.59■■□□□ 1.05
IDH3A-205ENST00000558509 ZC3H6P61129 1189 aaKnown RBP21.58■■□□□ 1.05
IDH3A-205ENST00000558509 CCDC61Q9Y6R9 512 aa21.58■■□□□ 1.05
IDH3A-205ENST00000558509 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
IDH3A-205ENST00000558509 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
IDH3A-205ENST00000558509 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
IDH3A-205ENST00000558509 CABP2Q9NPB3 220 aa21.57■■□□□ 1.04
IDH3A-205ENST00000558509 PIK3C2AO00443 1686 aa21.56■■□□□ 1.04
IDH3A-205ENST00000558509 USP19O94966 1318 aa21.55■■□□□ 1.04
IDH3A-205ENST00000558509 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
IDH3A-205ENST00000558509 AKAP12Q02952 1782 aa21.54■■□□□ 1.04
IDH3A-205ENST00000558509 STRN4Q9NRL3 753 aa21.54■■□□□ 1.04
IDH3A-205ENST00000558509 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
IDH3A-205ENST00000558509 SRPK2P78362 688 aaKnown RBP21.53■■□□□ 1.04
IDH3A-205ENST00000558509 LRP5O75197 1615 aa21.51■■□□□ 1.03
IDH3A-205ENST00000558509 COL18A1P39060 1754 aa21.51■■□□□ 1.03
IDH3A-205ENST00000558509 SLIT3O75094 1523 aa21.51■■□□□ 1.03
IDH3A-205ENST00000558509 USP6P35125 1406 aa21.51■■□□□ 1.03
IDH3A-205ENST00000558509 CPDO75976 1380 aa21.5■■□□□ 1.03
IDH3A-205ENST00000558509 SF3B2Q13435 895 aaKnown RBP21.5■■□□□ 1.03
IDH3A-205ENST00000558509 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
IDH3A-205ENST00000558509 WNK3Q9BYP7 1800 aa21.49■■□□□ 1.03
IDH3A-205ENST00000558509 PARP4Q9UKK3 1724 aaKnown RBP21.49■■□□□ 1.03
IDH3A-205ENST00000558509 RGPD5Q99666 1765 aa21.48■■□□□ 1.03
IDH3A-205ENST00000558509 RREB1Q92766 1687 aa21.47■■□□□ 1.03
IDH3A-205ENST00000558509 COL5A2P05997 1499 aaPredicted RBP21.47■■□□□ 1.03
IDH3A-205ENST00000558509 PSDA5PKW4 1024 aaPredicted RBP21.47■■□□□ 1.03
IDH3A-205ENST00000558509 EN1Q05925 392 aaPredicted RBP21.47■■□□□ 1.03
IDH3A-205ENST00000558509 LARP1Q6PKG0 1096 aaKnown RBP21.47■■□□□ 1.03
IDH3A-205ENST00000558509 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
IDH3A-205ENST00000558509 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
IDH3A-205ENST00000558509 DISP2A7MBM2 1401 aa21.46■■□□□ 1.03
IDH3A-205ENST00000558509 LRRC37A3O60309 1634 aa21.45■■□□□ 1.02
IDH3A-205ENST00000558509 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
IDH3A-205ENST00000558509 NUP188Q5SRE5 1749 aa21.44■■□□□ 1.02
IDH3A-205ENST00000558509 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
IDH3A-205ENST00000558509 PEAK1Q9H792 1746 aa21.44■■□□□ 1.02
IDH3A-205ENST00000558509 GCP02774 474 aa21.44■■□□□ 1.02
IDH3A-205ENST00000558509 BAG6P46379 1132 aa21.44■■□□□ 1.02
IDH3A-205ENST00000558509 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
IDH3A-205ENST00000558509 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
IDH3A-205ENST00000558509 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
IDH3A-205ENST00000558509 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
IDH3A-205ENST00000558509 TRIM37O94972 964 aa21.4■■□□□ 1.02
IDH3A-205ENST00000558509 EZH2Q15910 746 aaKnown RBP21.4■■□□□ 1.02
IDH3A-205ENST00000558509 BARGINQ6ZT62 677 aa21.4■■□□□ 1.02
IDH3A-205ENST00000558509 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.01
IDH3A-205ENST00000558509 EVA1CP58658 441 aa21.39■■□□□ 1.01
IDH3A-205ENST00000558509 NFAT5O94916 1531 aa21.39■■□□□ 1.01
IDH3A-205ENST00000558509 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
IDH3A-205ENST00000558509 NLRP6P59044 892 aa21.37■■□□□ 1.01
IDH3A-205ENST00000558509 TCP11L2Q8N4U5 519 aa21.37■■□□□ 1.01
IDH3A-205ENST00000558509 CRB1P82279 1406 aa21.37■■□□□ 1.01
IDH3A-205ENST00000558509 CPSF1Q10570 1443 aaKnown RBP21.37■■□□□ 1.01
IDH3A-205ENST00000558509 CAMKK2Q96RR4 588 aa21.36■■□□□ 1.01
IDH3A-205ENST00000558509 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
IDH3A-205ENST00000558509 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
IDH3A-205ENST00000558509 TTC21BQ7Z4L5 1316 aa21.35■■□□□ 1.01
IDH3A-205ENST00000558509 CD163L1Q9NR16 1453 aa21.35■■□□□ 1.01
IDH3A-205ENST00000558509 R3HDM1Q15032 1099 aaKnown RBP21.35■■□□□ 1.01
IDH3A-205ENST00000558509 FAM196AQ6ZSG2 479 aa21.35■■□□□ 1.01
IDH3A-205ENST00000558509 AXIN2Q9Y2T1 843 aa21.34■■□□□ 1.01
IDH3A-205ENST00000558509 LTN1O94822 1766 aa21.31■■□□□ 1
IDH3A-205ENST00000558509 APBA3O96018 575 aa21.31■■□□□ 1
IDH3A-205ENST00000558509 PDE3BQ13370 1112 aa21.31■■□□□ 1
IDH3A-205ENST00000558509 SOX12O15370 315 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms