RNA–Protein interactions for RNA: ENST00000558489.1

BMP4-203, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 605 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-203ENST00000558489 CABLES1Q8TDN4 633 aa21.46■■□□□ 1.03
BMP4-203ENST00000558489 CDK19Q9BWU1 502 aa21.46■■□□□ 1.03
BMP4-203ENST00000558489 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
BMP4-203ENST00000558489 PSME1Q06323 249 aa21.44■■□□□ 1.02
BMP4-203ENST00000558489 EVC2Q86UK5 1308 aa21.44■■□□□ 1.02
BMP4-203ENST00000558489 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
BMP4-203ENST00000558489 UNC5CLQ8IV45 518 aa21.42■■□□□ 1.02
BMP4-203ENST00000558489 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
BMP4-203ENST00000558489 QRICH2Q9H0J4 1663 aa21.41■■□□□ 1.02
BMP4-203ENST00000558489 PHRF1Q9P1Y6 1649 aaKnown RBP21.41■■□□□ 1.02
BMP4-203ENST00000558489 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
BMP4-203ENST00000558489 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
BMP4-203ENST00000558489 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
BMP4-203ENST00000558489 ATAD2Q6PL18 1390 aa21.39■■□□□ 1.02
BMP4-203ENST00000558489 SRCAPQ6ZRS2 3230 aa21.38■■□□□ 1.01
BMP4-203ENST00000558489 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
BMP4-203ENST00000558489 NGDNQ8NEJ9 315 aaKnown RBP21.38■■□□□ 1.01
BMP4-203ENST00000558489 POLR3AO14802 1390 aaPredicted RBP21.36■■□□□ 1.01
BMP4-203ENST00000558489 FAM83GA6ND36 823 aa21.35■■□□□ 1.01
BMP4-203ENST00000558489 LMOD2Q6P5Q4 547 aa21.35■■□□□ 1.01
BMP4-203ENST00000558489 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
BMP4-203ENST00000558489 VPS72Q15906 364 aa21.34■■□□□ 1.01
BMP4-203ENST00000558489 PLEKHG3A1L390 1219 aa21.33■■□□□ 1.01
BMP4-203ENST00000558489 CABP2Q9NPB3 220 aa21.33■■□□□ 1.01
BMP4-203ENST00000558489 PUS7Q96PZ0 661 aaKnown RBP21.32■■□□□ 1
BMP4-203ENST00000558489 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
BMP4-203ENST00000558489 NRKQ7Z2Y5 1582 aa21.31■■□□□ 1
BMP4-203ENST00000558489 HAP1P54257 671 aaPredicted RBP21.3■■□□□ 1
BMP4-203ENST00000558489 USP47Q96K76 1375 aa21.3■■□□□ 1
BMP4-203ENST00000558489 THSD7AQ9UPZ6 1657 aa21.29■■□□□ 1
BMP4-203ENST00000558489 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
BMP4-203ENST00000558489 CDCA8Q53HL2 280 aa21.28■■□□□ 1
BMP4-203ENST00000558489 PPIP5K1Q6PFW1 1433 aa21.28■■□□□ 1
BMP4-203ENST00000558489 ACEP12821 1306 aa21.28■■□□□ 1
BMP4-203ENST00000558489 TMF1P82094 1093 aa21.27■■□□□ 1
BMP4-203ENST00000558489 ZNF692Q9BU19 519 aaPredicted RBP21.27■■□□□ 1
BMP4-203ENST00000558489 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
BMP4-203ENST00000558489 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
BMP4-203ENST00000558489 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
BMP4-203ENST00000558489 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
BMP4-203ENST00000558489 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
BMP4-203ENST00000558489 SEPT12Q8IYM1 358 aa21.25■□□□□ 0.99
BMP4-203ENST00000558489 BTG4Q9NY30 223 aa21.25■□□□□ 0.99
BMP4-203ENST00000558489 TESK2Q96S53 571 aa21.24■□□□□ 0.99
BMP4-203ENST00000558489 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
BMP4-203ENST00000558489 AKAP12Q02952 1782 aa21.22■□□□□ 0.99
BMP4-203ENST00000558489 USP19O94966 1318 aa21.22■□□□□ 0.99
BMP4-203ENST00000558489 PIK3C2AO00443 1686 aa21.21■□□□□ 0.99
BMP4-203ENST00000558489 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
BMP4-203ENST00000558489 SPATA31A5Q5VU36 1347 aa21.2■□□□□ 0.98
BMP4-203ENST00000558489 SPATA31A7Q8IWB4 1347 aa21.2■□□□□ 0.98
BMP4-203ENST00000558489 SSH2Q76I76 1423 aa21.2■□□□□ 0.98
BMP4-203ENST00000558489 CAMTA1Q9Y6Y1 1673 aa21.19■□□□□ 0.98
BMP4-203ENST00000558489 NUTM2GQ5VZR2 741 aa21.19■□□□□ 0.98
BMP4-203ENST00000558489 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
BMP4-203ENST00000558489 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
BMP4-203ENST00000558489 NINLQ9Y2I6 1382 aa21.19■□□□□ 0.98
BMP4-203ENST00000558489 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
BMP4-203ENST00000558489 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
BMP4-203ENST00000558489 TERF2IPQ9NYB0 399 aa21.18■□□□□ 0.98
BMP4-203ENST00000558489 CCDC9Q9Y3X0 531 aaKnown RBP21.18■□□□□ 0.98
BMP4-203ENST00000558489 USP6P35125 1406 aa21.18■□□□□ 0.98
BMP4-203ENST00000558489 TNS1Q9HBL0 1735 aaKnown RBP21.18■□□□□ 0.98
BMP4-203ENST00000558489 FAM98CQ17RN3 349 aaKnown RBP21.17■□□□□ 0.98
BMP4-203ENST00000558489 SLIT3O75094 1523 aa21.17■□□□□ 0.98
BMP4-203ENST00000558489 CPDO75976 1380 aa21.16■□□□□ 0.98
BMP4-203ENST00000558489 CHRNA2Q15822 529 aa21.16■□□□□ 0.98
BMP4-203ENST00000558489 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
BMP4-203ENST00000558489 COL18A1P39060 1754 aa21.15■□□□□ 0.98
BMP4-203ENST00000558489 KRT27Q7Z3Y8 459 aa21.15■□□□□ 0.98
BMP4-203ENST00000558489 RGPD1P0DJD0 1748 aa21.15■□□□□ 0.98
BMP4-203ENST00000558489 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
BMP4-203ENST00000558489 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
BMP4-203ENST00000558489 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
BMP4-203ENST00000558489 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
BMP4-203ENST00000558489 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
BMP4-203ENST00000558489 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
BMP4-203ENST00000558489 TTC21AQ8NDW8 1320 aa21.12■□□□□ 0.97
BMP4-203ENST00000558489 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
BMP4-203ENST00000558489 SLC12A5Q9H2X9 1139 aa21.11■□□□□ 0.97
BMP4-203ENST00000558489 CPSF1Q10570 1443 aaKnown RBP21.11■□□□□ 0.97
BMP4-203ENST00000558489 COL5A2P05997 1499 aaPredicted RBP21.09■□□□□ 0.97
BMP4-203ENST00000558489 RGPD5Q99666 1765 aa21.09■□□□□ 0.97
BMP4-203ENST00000558489 TTC21BQ7Z4L5 1316 aa21.08■□□□□ 0.97
BMP4-203ENST00000558489 GCP02774 474 aa21.08■□□□□ 0.97
BMP4-203ENST00000558489 NLRP6P59044 892 aa21.08■□□□□ 0.97
BMP4-203ENST00000558489 PARP4Q9UKK3 1724 aaKnown RBP21.08■□□□□ 0.97
BMP4-203ENST00000558489 WNK3Q9BYP7 1800 aa21.08■□□□□ 0.96
BMP4-203ENST00000558489 USP54Q70EL1 1684 aa21.08■□□□□ 0.96
BMP4-203ENST00000558489 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
BMP4-203ENST00000558489 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
BMP4-203ENST00000558489 CD163L1Q9NR16 1453 aa21.06■□□□□ 0.96
BMP4-203ENST00000558489 A0A0G2JS52 829 aa21.05■□□□□ 0.96
BMP4-203ENST00000558489 MYT1Q01538 1121 aa21.05■□□□□ 0.96
BMP4-203ENST00000558489 NFAT5O94916 1531 aa21.04■□□□□ 0.96
BMP4-203ENST00000558489 LARP1Q6PKG0 1096 aaKnown RBP21.04■□□□□ 0.96
BMP4-203ENST00000558489 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
BMP4-203ENST00000558489 DISP2A7MBM2 1401 aa21.04■□□□□ 0.96
BMP4-203ENST00000558489 EDC4Q6P2E9 1401 aaKnown RBP21.04■□□□□ 0.96
BMP4-203ENST00000558489 ANKRD36BQ8N2N9 1353 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms