RNA–Protein interactions for RNA: ENST00000558485.1

NEO1-203, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-203ENST00000558485 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
NEO1-203ENST00000558485 COL16A1Q07092 1604 aaPredicted RBP14.12□□□□□ -0.15
NEO1-203ENST00000558485 PSME1Q06323 249 aa14.12□□□□□ -0.15
NEO1-203ENST00000558485 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
NEO1-203ENST00000558485 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
NEO1-203ENST00000558485 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
NEO1-203ENST00000558485 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
NEO1-203ENST00000558485 ANKRD26Q9UPS8 1709 aa14.11□□□□□ -0.15
NEO1-203ENST00000558485 TTC21BQ7Z4L5 1316 aa14.11□□□□□ -0.15
NEO1-203ENST00000558485 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
NEO1-203ENST00000558485 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
NEO1-203ENST00000558485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
NEO1-203ENST00000558485 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
NEO1-203ENST00000558485 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
NEO1-203ENST00000558485 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
NEO1-203ENST00000558485 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
NEO1-203ENST00000558485 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
NEO1-203ENST00000558485 NME9Q86XW9 330 aa14.07□□□□□ -0.16
NEO1-203ENST00000558485 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
NEO1-203ENST00000558485 KNSTRNQ9Y448 316 aa14.07□□□□□ -0.16
NEO1-203ENST00000558485 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
NEO1-203ENST00000558485 FYB1O15117 783 aa14.06□□□□□ -0.16
NEO1-203ENST00000558485 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
NEO1-203ENST00000558485 PHRF1Q9P1Y6 1649 aaKnown RBP14.05□□□□□ -0.16
NEO1-203ENST00000558485 ABCA3Q99758 1704 aa14.05□□□□□ -0.16
NEO1-203ENST00000558485 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
NEO1-203ENST00000558485 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
NEO1-203ENST00000558485 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
NEO1-203ENST00000558485 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
NEO1-203ENST00000558485 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
NEO1-203ENST00000558485 COL22A1Q8NFW1 1626 aaPredicted RBP14.04□□□□□ -0.16
NEO1-203ENST00000558485 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
NEO1-203ENST00000558485 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
NEO1-203ENST00000558485 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
NEO1-203ENST00000558485 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
NEO1-203ENST00000558485 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
NEO1-203ENST00000558485 NSD2O96028 1365 aa14.03□□□□□ -0.16
NEO1-203ENST00000558485 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
NEO1-203ENST00000558485 SLIT3O75094 1523 aa14.02□□□□□ -0.16
NEO1-203ENST00000558485 ARHGEF10O15013 1369 aa14.02□□□□□ -0.17
NEO1-203ENST00000558485 HSPA1LP34931 641 aa14.02□□□□□ -0.17
NEO1-203ENST00000558485 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
NEO1-203ENST00000558485 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
NEO1-203ENST00000558485 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
NEO1-203ENST00000558485 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
NEO1-203ENST00000558485 LRRC59Q96AG4 307 aaKnown RBP14.01□□□□□ -0.17
NEO1-203ENST00000558485 USP19O94966 1318 aa14□□□□□ -0.17
NEO1-203ENST00000558485 NLRP6P59044 892 aa14□□□□□ -0.17
NEO1-203ENST00000558485 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
NEO1-203ENST00000558485 NFAT5O94916 1531 aa14□□□□□ -0.17
NEO1-203ENST00000558485 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
NEO1-203ENST00000558485 PARD3Q8TEW0 1356 aa13.98□□□□□ -0.17
NEO1-203ENST00000558485 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
NEO1-203ENST00000558485 CABLES1Q8TDN4 633 aa13.98□□□□□ -0.17
NEO1-203ENST00000558485 COG3Q96JB2 828 aa13.98□□□□□ -0.17
NEO1-203ENST00000558485 LTN1O94822 1766 aa13.97□□□□□ -0.17
NEO1-203ENST00000558485 FBLN1P23142 703 aa13.97□□□□□ -0.17
NEO1-203ENST00000558485 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
NEO1-203ENST00000558485 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
NEO1-203ENST00000558485 JCADQ9P266 1359 aa13.96□□□□□ -0.17
NEO1-203ENST00000558485 PRKRIP1Q9H875 184 aaPredicted RBP13.96□□□□□ -0.17
NEO1-203ENST00000558485 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
NEO1-203ENST00000558485 TNNT2P45379 298 aaPredicted RBP13.95□□□□□ -0.18
NEO1-203ENST00000558485 SOX12O15370 315 aa13.94□□□□□ -0.18
NEO1-203ENST00000558485 GCP02774 474 aa13.94□□□□□ -0.18
NEO1-203ENST00000558485 AATKQ6ZMQ8 1374 aa13.94□□□□□ -0.18
NEO1-203ENST00000558485 ANP32CO43423 234 aa13.93□□□□□ -0.18
NEO1-203ENST00000558485 RALBP1Q15311 655 aa13.93□□□□□ -0.18
NEO1-203ENST00000558485 COL18A1P39060 1754 aa13.93□□□□□ -0.18
NEO1-203ENST00000558485 SMG6Q86US8 1419 aaKnown RBP13.92□□□□□ -0.18
NEO1-203ENST00000558485 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
NEO1-203ENST00000558485 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
NEO1-203ENST00000558485 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
NEO1-203ENST00000558485 LRP6O75581 1613 aa13.92□□□□□ -0.18
NEO1-203ENST00000558485 RGPD5Q99666 1765 aa13.91□□□□□ -0.18
NEO1-203ENST00000558485 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
NEO1-203ENST00000558485 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
NEO1-203ENST00000558485 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
NEO1-203ENST00000558485 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
NEO1-203ENST00000558485 CPDO75976 1380 aa13.9□□□□□ -0.18
NEO1-203ENST00000558485 LMO7Q8WWI1 1683 aa13.9□□□□□ -0.18
NEO1-203ENST00000558485 SPATA31A6Q5VVP1 1343 aa13.9□□□□□ -0.19
NEO1-203ENST00000558485 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.19
NEO1-203ENST00000558485 KIAA0232Q92628 1395 aa13.89□□□□□ -0.19
NEO1-203ENST00000558485 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
NEO1-203ENST00000558485 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
NEO1-203ENST00000558485 ARHGEF25Q86VW2 580 aa13.89□□□□□ -0.19
NEO1-203ENST00000558485 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
NEO1-203ENST00000558485 MIER1Q8N108 512 aa13.89□□□□□ -0.19
NEO1-203ENST00000558485 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
NEO1-203ENST00000558485 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
NEO1-203ENST00000558485 MTHFSP49914 203 aa13.88□□□□□ -0.19
NEO1-203ENST00000558485 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
NEO1-203ENST00000558485 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
NEO1-203ENST00000558485 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
NEO1-203ENST00000558485 ABCC6O95255 1503 aa13.87□□□□□ -0.19
NEO1-203ENST00000558485 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
NEO1-203ENST00000558485 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
NEO1-203ENST00000558485 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
NEO1-203ENST00000558485 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms