RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
RPL28-205ENST00000558131 TRPM1Q7Z4N2 1603 aa23.86■■□□□ 1.41
RPL28-205ENST00000558131 ONECUT3O60422 494 aaPredicted RBP23.86■■□□□ 1.41
RPL28-205ENST00000558131 POLR3AO14802 1390 aaPredicted RBP23.86■■□□□ 1.41
RPL28-205ENST00000558131 BLMP54132 1417 aaPredicted RBP23.85■■□□□ 1.41
RPL28-205ENST00000558131 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
RPL28-205ENST00000558131 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
RPL28-205ENST00000558131 SEPT12Q8IYM1 358 aa23.83■■□□□ 1.41
RPL28-205ENST00000558131 CCDC125Q86Z20 511 aa23.82■■□□□ 1.4
RPL28-205ENST00000558131 LMO7Q8WWI1 1683 aa23.82■■□□□ 1.4
RPL28-205ENST00000558131 NGDNQ8NEJ9 315 aaKnown RBP23.81■■□□□ 1.4
RPL28-205ENST00000558131 CDK19Q9BWU1 502 aa23.8■■□□□ 1.4
RPL28-205ENST00000558131 TNS1Q9HBL0 1735 aaKnown RBP23.8■■□□□ 1.4
RPL28-205ENST00000558131 BTG4Q9NY30 223 aa23.8■■□□□ 1.4
RPL28-205ENST00000558131 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
RPL28-205ENST00000558131 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
RPL28-205ENST00000558131 ACEP12821 1306 aa23.76■■□□□ 1.39
RPL28-205ENST00000558131 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
RPL28-205ENST00000558131 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
RPL28-205ENST00000558131 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
RPL28-205ENST00000558131 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
RPL28-205ENST00000558131 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
RPL28-205ENST00000558131 PPIP5K1Q6PFW1 1433 aa23.74■■□□□ 1.39
RPL28-205ENST00000558131 FAM98CQ17RN3 349 aaKnown RBP23.73■■□□□ 1.39
RPL28-205ENST00000558131 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
RPL28-205ENST00000558131 CCDC61Q9Y6R9 512 aa23.73■■□□□ 1.39
RPL28-205ENST00000558131 NBPF8Q3BBV2 869 aa23.72■■□□□ 1.39
RPL28-205ENST00000558131 DEFB132Q7Z7B7 95 aa23.72■■□□□ 1.39
RPL28-205ENST00000558131 CENPJQ9HC77 1338 aaPredicted RBP23.72■■□□□ 1.39
RPL28-205ENST00000558131 PIK3C2AO00443 1686 aa23.72■■□□□ 1.39
RPL28-205ENST00000558131 AKAP12Q02952 1782 aa23.71■■□□□ 1.39
RPL28-205ENST00000558131 CAMTA1Q9Y6Y1 1673 aa23.71■■□□□ 1.39
RPL28-205ENST00000558131 USP19O94966 1318 aa23.7■■□□□ 1.38
RPL28-205ENST00000558131 L3MBTL2Q969R5 705 aa23.7■■□□□ 1.38
RPL28-205ENST00000558131 PRDM11Q9NQV5 511 aa23.7■■□□□ 1.38
RPL28-205ENST00000558131 ZRANB1Q9UGI0 708 aa23.69■■□□□ 1.38
RPL28-205ENST00000558131 CHRNA2Q15822 529 aa23.68■■□□□ 1.38
RPL28-205ENST00000558131 NUTM2GQ5VZR2 741 aa23.68■■□□□ 1.38
RPL28-205ENST00000558131 SLIT3O75094 1523 aa23.68■■□□□ 1.38
RPL28-205ENST00000558131 SPATA31A1Q5TZJ5 1347 aa23.67■■□□□ 1.38
RPL28-205ENST00000558131 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
RPL28-205ENST00000558131 CPDO75976 1380 aa23.66■■□□□ 1.38
RPL28-205ENST00000558131 SIN3AQ96ST3 1273 aa23.66■■□□□ 1.38
RPL28-205ENST00000558131 LRP5O75197 1615 aa23.66■■□□□ 1.38
RPL28-205ENST00000558131 COL18A1P39060 1754 aa23.65■■□□□ 1.38
RPL28-205ENST00000558131 CABP2Q9NPB3 220 aa23.65■■□□□ 1.38
RPL28-205ENST00000558131 USP6P35125 1406 aa23.65■■□□□ 1.38
RPL28-205ENST00000558131 PARP4Q9UKK3 1724 aaKnown RBP23.64■■□□□ 1.38
RPL28-205ENST00000558131 WNK3Q9BYP7 1800 aa23.64■■□□□ 1.38
RPL28-205ENST00000558131 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
RPL28-205ENST00000558131 DISP2A7MBM2 1401 aa23.63■■□□□ 1.37
RPL28-205ENST00000558131 A0A0G2JS52 829 aa23.62■■□□□ 1.37
RPL28-205ENST00000558131 SRPK2P78362 688 aaKnown RBP23.62■■□□□ 1.37
RPL28-205ENST00000558131 MYT1Q01538 1121 aa23.62■■□□□ 1.37
RPL28-205ENST00000558131 FAM182BQ5T319 152 aa23.62■■□□□ 1.37
RPL28-205ENST00000558131 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
RPL28-205ENST00000558131 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
RPL28-205ENST00000558131 MON2Q7Z3U7 1717 aa23.61■■□□□ 1.37
RPL28-205ENST00000558131 RREB1Q92766 1687 aa23.6■■□□□ 1.37
RPL28-205ENST00000558131 ABTB2Q8N961 1025 aa23.6■■□□□ 1.37
RPL28-205ENST00000558131 SF3B2Q13435 895 aaKnown RBP23.58■■□□□ 1.37
RPL28-205ENST00000558131 STRN4Q9NRL3 753 aa23.58■■□□□ 1.37
RPL28-205ENST00000558131 PEAK1Q9H792 1746 aa23.58■■□□□ 1.37
RPL28-205ENST00000558131 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
RPL28-205ENST00000558131 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
RPL28-205ENST00000558131 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
RPL28-205ENST00000558131 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
RPL28-205ENST00000558131 CABP1Q9NZU7 370 aa23.56■■□□□ 1.36
RPL28-205ENST00000558131 GCP02774 474 aa23.55■■□□□ 1.36
RPL28-205ENST00000558131 LARP1Q6PKG0 1096 aaKnown RBP23.55■■□□□ 1.36
RPL28-205ENST00000558131 NUP188Q5SRE5 1749 aa23.55■■□□□ 1.36
RPL28-205ENST00000558131 BARGINQ6ZT62 677 aa23.54■■□□□ 1.36
RPL28-205ENST00000558131 BAG6P46379 1132 aa23.53■■□□□ 1.36
RPL28-205ENST00000558131 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
RPL28-205ENST00000558131 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
RPL28-205ENST00000558131 NFAT5O94916 1531 aa23.52■■□□□ 1.36
RPL28-205ENST00000558131 EVC2Q86UK5 1308 aa23.52■■□□□ 1.36
RPL28-205ENST00000558131 CPSF1Q10570 1443 aaKnown RBP23.51■■□□□ 1.35
RPL28-205ENST00000558131 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
RPL28-205ENST00000558131 SBNO2Q9Y2G9 1366 aa23.51■■□□□ 1.35
RPL28-205ENST00000558131 EN1Q05925 392 aaPredicted RBP23.5■■□□□ 1.35
RPL28-205ENST00000558131 USP35Q9P2H5 1018 aa23.5■■□□□ 1.35
RPL28-205ENST00000558131 CRB1P82279 1406 aa23.5■■□□□ 1.35
RPL28-205ENST00000558131 AATKQ6ZMQ8 1374 aa23.49■■□□□ 1.35
RPL28-205ENST00000558131 CD163L1Q9NR16 1453 aa23.49■■□□□ 1.35
RPL28-205ENST00000558131 RGPD3A6NKT7 1758 aaPredicted RBP23.47■■□□□ 1.35
RPL28-205ENST00000558131 RGPD4Q7Z3J3 1758 aa23.47■■□□□ 1.35
RPL28-205ENST00000558131 NLRP6P59044 892 aa23.46■■□□□ 1.35
RPL28-205ENST00000558131 TCP11L2Q8N4U5 519 aa23.46■■□□□ 1.35
RPL28-205ENST00000558131 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
RPL28-205ENST00000558131 EVA1CP58658 441 aa23.45■■□□□ 1.34
RPL28-205ENST00000558131 FAM196AQ6ZSG2 479 aa23.45■■□□□ 1.34
RPL28-205ENST00000558131 LTN1O94822 1766 aa23.45■■□□□ 1.34
RPL28-205ENST00000558131 ABCC6O95255 1503 aa23.44■■□□□ 1.34
RPL28-205ENST00000558131 TTC21BQ7Z4L5 1316 aa23.44■■□□□ 1.34
RPL28-205ENST00000558131 EZH2Q15910 746 aaKnown RBP23.44■■□□□ 1.34
RPL28-205ENST00000558131 CAMKK2Q96RR4 588 aa23.44■■□□□ 1.34
RPL28-205ENST00000558131 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
RPL28-205ENST00000558131 TRIM37O94972 964 aa23.43■■□□□ 1.34
RPL28-205ENST00000558131 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms