RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
CLPX-202ENST00000558103 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
CLPX-202ENST00000558103 MSS51Q4VC12 460 aa10.92□□□□□ -0.66
CLPX-202ENST00000558103 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
CLPX-202ENST00000558103 RNF223E7ERA6 249 aa10.91□□□□□ -0.66
CLPX-202ENST00000558103 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
CLPX-202ENST00000558103 TREML4Q6UXN2 200 aa10.91□□□□□ -0.66
CLPX-202ENST00000558103 RETREG3Q86VR2 466 aa10.91□□□□□ -0.66
CLPX-202ENST00000558103 LIMD1Q9UGP4 676 aa10.91□□□□□ -0.66
CLPX-202ENST00000558103 ADAMTS12P58397 1594 aa10.9□□□□□ -0.66
CLPX-202ENST00000558103 MYT1Q01538 1121 aa10.9□□□□□ -0.66
CLPX-202ENST00000558103 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
CLPX-202ENST00000558103 LCE2AQ5TA79 106 aaPredicted RBP10.9□□□□□ -0.66
CLPX-202ENST00000558103 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
CLPX-202ENST00000558103 TOP2BQ02880 1626 aa10.9□□□□□ -0.66
CLPX-202ENST00000558103 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
CLPX-202ENST00000558103 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
CLPX-202ENST00000558103 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
CLPX-202ENST00000558103 MTMR2Q13614 643 aa10.89□□□□□ -0.67
CLPX-202ENST00000558103 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
CLPX-202ENST00000558103 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
CLPX-202ENST00000558103 HRCP23327 699 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 MMP16P51512 607 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 CSPP1Q1MSJ5 1256 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 TRIM67Q6ZTA4 783 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 ZBTB3Q9H5J0 574 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 PRDM9Q9NQV7 894 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 GRIN2AQ12879 1464 aa10.87□□□□□ -0.67
CLPX-202ENST00000558103 CEP170Q5SW79 1584 aa10.86□□□□□ -0.67
CLPX-202ENST00000558103 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
CLPX-202ENST00000558103 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
CLPX-202ENST00000558103 LILRB3O75022 631 aa10.85□□□□□ -0.67
CLPX-202ENST00000558103 DXOO77932 396 aaKnown RBP10.85□□□□□ -0.67
CLPX-202ENST00000558103 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
CLPX-202ENST00000558103 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
CLPX-202ENST00000558103 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
CLPX-202ENST00000558103 QPCTQ16769 361 aa10.84□□□□□ -0.67
CLPX-202ENST00000558103 NUP160Q12769 1436 aa10.84□□□□□ -0.67
CLPX-202ENST00000558103 NUTM2BA6NNL0 878 aaPredicted RBP10.83□□□□□ -0.68
CLPX-202ENST00000558103 NUTM2EB1AL46 878 aaPredicted RBP10.83□□□□□ -0.68
CLPX-202ENST00000558103 JUNDP17535 347 aa10.83□□□□□ -0.68
CLPX-202ENST00000558103 NUTM2DQ5VT03 806 aaPredicted RBP10.83□□□□□ -0.68
CLPX-202ENST00000558103 NUTM2AQ8IVF1 878 aaPredicted RBP10.83□□□□□ -0.68
CLPX-202ENST00000558103 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CLPX-202ENST00000558103 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLPX-202ENST00000558103 ATP1B4Q9UN42 357 aaPredicted RBP10.82□□□□□ -0.68
CLPX-202ENST00000558103 FCF1Q9Y324 198 aaKnown RBP10.82□□□□□ -0.68
CLPX-202ENST00000558103 ERICH3Q5RHP9 1530 aa10.82□□□□□ -0.68
CLPX-202ENST00000558103 RTL5Q5HYW3 569 aaPredicted RBP10.81□□□□□ -0.68
CLPX-202ENST00000558103 DESI1Q6ICB0 168 aa10.81□□□□□ -0.68
CLPX-202ENST00000558103 CFAP99D6REC4 459 aa10.8□□□□□ -0.68
CLPX-202ENST00000558103 SLC19A1P41440 591 aa10.79□□□□□ -0.68
CLPX-202ENST00000558103 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
CLPX-202ENST00000558103 EMID1Q96A84 441 aaPredicted RBP10.79□□□□□ -0.68
CLPX-202ENST00000558103 PCMTD1Q96MG8 357 aaPredicted RBP10.79□□□□□ -0.68
CLPX-202ENST00000558103 KIF13AQ9H1H9 1805 aa10.79□□□□□ -0.68
CLPX-202ENST00000558103 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
CLPX-202ENST00000558103 SUPT5HO00267 1087 aaKnown RBP10.78□□□□□ -0.68
CLPX-202ENST00000558103 DGAT1O75907 488 aa10.78□□□□□ -0.68
CLPX-202ENST00000558103 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
CLPX-202ENST00000558103 LOC100996750A0A140TA64 210 aa10.77□□□□□ -0.69
CLPX-202ENST00000558103 PPP2R2DQ66LE6 453 aa10.77□□□□□ -0.69
CLPX-202ENST00000558103 KRTAP4-6Q9BYQ5 205 aa10.77□□□□□ -0.69
CLPX-202ENST00000558103 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.69
CLPX-202ENST00000558103 FBXO31Q5XUX0 539 aaPredicted RBP10.76□□□□□ -0.69
CLPX-202ENST00000558103 PTPRNQ16849 979 aa10.75□□□□□ -0.69
CLPX-202ENST00000558103 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
CLPX-202ENST00000558103 CCDC24Q8N4L8 307 aa10.75□□□□□ -0.69
CLPX-202ENST00000558103 NUDT12Q9BQG2 462 aa10.75□□□□□ -0.69
CLPX-202ENST00000558103 ST8SIA5O15466 376 aa10.74□□□□□ -0.69
CLPX-202ENST00000558103 RPIAP49247 311 aa10.74□□□□□ -0.69
CLPX-202ENST00000558103 STK17AQ9UEE5 414 aa10.74□□□□□ -0.69
CLPX-202ENST00000558103 ZBTB24O43167 697 aaPredicted RBP10.73□□□□□ -0.69
CLPX-202ENST00000558103 SPRYD7Q5W111 196 aa10.73□□□□□ -0.69
CLPX-202ENST00000558103 EVA1BQ9NVM1 165 aa10.73□□□□□ -0.69
CLPX-202ENST00000558103 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
CLPX-202ENST00000558103 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
CLPX-202ENST00000558103 CCNYL3P0C7X3 344 aa10.72□□□□□ -0.69
CLPX-202ENST00000558103 TSC1Q92574 1164 aa10.72□□□□□ -0.69
CLPX-202ENST00000558103 HELBQ8NG08 1087 aaPredicted RBP10.71□□□□□ -0.69
CLPX-202ENST00000558103 PER1O15534 1290 aaPredicted RBP10.7□□□□□ -0.7
CLPX-202ENST00000558103 WFS1O76024 890 aa10.7□□□□□ -0.7
CLPX-202ENST00000558103 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
CLPX-202ENST00000558103 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
CLPX-202ENST00000558103 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
CLPX-202ENST00000558103 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
CLPX-202ENST00000558103 CUL7Q14999 1698 aa10.69□□□□□ -0.7
CLPX-202ENST00000558103 PRG4Q92954 1404 aaPredicted RBP10.68□□□□□ -0.7
CLPX-202ENST00000558103 RFC5P40937 340 aa10.68□□□□□ -0.7
CLPX-202ENST00000558103 AAASQ9NRG9 546 aa10.67□□□□□ -0.7
CLPX-202ENST00000558103 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 TNFRSF10AO00220 468 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 AP1G2O75843 785 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 TMEM259Q4ZIN3 620 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 ZNF697Q5TEC3 545 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 MAPKBP1O60336 1514 aa10.66□□□□□ -0.7
CLPX-202ENST00000558103 F12P00748 615 aaPredicted RBP10.65□□□□□ -0.7
CLPX-202ENST00000558103 CTHP32929 405 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms