RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.16
PPP1R3E-202ENST00000558058 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
PPP1R3E-202ENST00000558058 U2SURPO15042 1029 aaKnown RBP14.02□□□□□ -0.17
PPP1R3E-202ENST00000558058 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
PPP1R3E-202ENST00000558058 FAM135BQ49AJ0 1406 aa14.01□□□□□ -0.17
PPP1R3E-202ENST00000558058 TECPR2O15040 1411 aa14.01□□□□□ -0.17
PPP1R3E-202ENST00000558058 BRD4O60885 1362 aaPredicted RBP14□□□□□ -0.17
PPP1R3E-202ENST00000558058 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
PPP1R3E-202ENST00000558058 CD163L1Q9NR16 1453 aa14□□□□□ -0.17
PPP1R3E-202ENST00000558058 DLC1Q96QB1 1528 aa13.99□□□□□ -0.17
PPP1R3E-202ENST00000558058 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
PPP1R3E-202ENST00000558058 ATP7BP35670 1465 aa13.98□□□□□ -0.17
PPP1R3E-202ENST00000558058 IPO9Q96P70 1041 aaKnown RBP13.98□□□□□ -0.17
PPP1R3E-202ENST00000558058 CPS1P31327 1500 aa13.98□□□□□ -0.17
PPP1R3E-202ENST00000558058 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
PPP1R3E-202ENST00000558058 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
PPP1R3E-202ENST00000558058 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.17
PPP1R3E-202ENST00000558058 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
PPP1R3E-202ENST00000558058 SIRT1Q96EB6 747 aa13.96□□□□□ -0.17
PPP1R3E-202ENST00000558058 COG3Q96JB2 828 aa13.96□□□□□ -0.17
PPP1R3E-202ENST00000558058 LMTK3Q96Q04 1460 aa13.96□□□□□ -0.17
PPP1R3E-202ENST00000558058 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 NKTRP30414 1462 aaKnown RBP13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 NLRP6P59044 892 aa13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 PSME1Q06323 249 aa13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 PKNOX2Q96KN3 472 aa13.95□□□□□ -0.18
PPP1R3E-202ENST00000558058 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 ATF3P18847 181 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 TTC21BQ7Z4L5 1316 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 APAF1O14727 1248 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 HMOX1P09601 288 aa13.94□□□□□ -0.18
PPP1R3E-202ENST00000558058 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
PPP1R3E-202ENST00000558058 DIP2AQ14689 1571 aa13.93□□□□□ -0.18
PPP1R3E-202ENST00000558058 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
PPP1R3E-202ENST00000558058 RGPD8O14715 1765 aaPredicted RBP13.92□□□□□ -0.18
PPP1R3E-202ENST00000558058 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
PPP1R3E-202ENST00000558058 NINLQ9Y2I6 1382 aa13.92□□□□□ -0.18
PPP1R3E-202ENST00000558058 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
PPP1R3E-202ENST00000558058 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
PPP1R3E-202ENST00000558058 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
PPP1R3E-202ENST00000558058 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
PPP1R3E-202ENST00000558058 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
PPP1R3E-202ENST00000558058 NEFMP07197 916 aa13.9□□□□□ -0.18
PPP1R3E-202ENST00000558058 CPSF1Q10570 1443 aaKnown RBP13.9□□□□□ -0.18
PPP1R3E-202ENST00000558058 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
PPP1R3E-202ENST00000558058 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
PPP1R3E-202ENST00000558058 NPC1L1Q9UHC9 1359 aa13.89□□□□□ -0.19
PPP1R3E-202ENST00000558058 XRN1Q8IZH2 1706 aaKnown RBP13.89□□□□□ -0.19
PPP1R3E-202ENST00000558058 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
PPP1R3E-202ENST00000558058 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 EDC4Q6P2E9 1401 aaKnown RBP13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 USP6P35125 1406 aa13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 ADGRL3Q9HAR2 1447 aa13.88□□□□□ -0.19
PPP1R3E-202ENST00000558058 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
PPP1R3E-202ENST00000558058 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
PPP1R3E-202ENST00000558058 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
PPP1R3E-202ENST00000558058 AMPHP49418 695 aa13.85□□□□□ -0.19
PPP1R3E-202ENST00000558058 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
PPP1R3E-202ENST00000558058 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
PPP1R3E-202ENST00000558058 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
PPP1R3E-202ENST00000558058 ZC3H6P61129 1189 aaKnown RBP13.84□□□□□ -0.19
PPP1R3E-202ENST00000558058 KRT28Q7Z3Y7 464 aa13.84□□□□□ -0.19
PPP1R3E-202ENST00000558058 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
PPP1R3E-202ENST00000558058 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
PPP1R3E-202ENST00000558058 NSD2O96028 1365 aa13.84□□□□□ -0.19
PPP1R3E-202ENST00000558058 NUDCQ9Y266 331 aa13.83□□□□□ -0.19
PPP1R3E-202ENST00000558058 MSH6P52701 1360 aa13.83□□□□□ -0.2
PPP1R3E-202ENST00000558058 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
PPP1R3E-202ENST00000558058 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 STRCP1A6NGW2 1772 aa13.82□□□□□ -0.2
PPP1R3E-202ENST00000558058 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
PPP1R3E-202ENST00000558058 THUMPD2Q9BTF0 503 aaKnown RBP13.81□□□□□ -0.2
PPP1R3E-202ENST00000558058 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
PPP1R3E-202ENST00000558058 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
PPP1R3E-202ENST00000558058 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
PPP1R3E-202ENST00000558058 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
PPP1R3E-202ENST00000558058 SULT6B1Q6IMI4 303 aa13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
PPP1R3E-202ENST00000558058 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
PPP1R3E-202ENST00000558058 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
PPP1R3E-202ENST00000558058 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.2
PPP1R3E-202ENST00000558058 RUNDC1Q96C34 613 aa13.77□□□□□ -0.2
PPP1R3E-202ENST00000558058 PLIN1O60240 522 aa13.77□□□□□ -0.21
PPP1R3E-202ENST00000558058 ANKARQ7Z5J8 1434 aa13.77□□□□□ -0.21
PPP1R3E-202ENST00000558058 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
PPP1R3E-202ENST00000558058 MAP2P11137 1827 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms