RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 GLI3P10071 1580 aa19.61■□□□□ 0.73
SNRPA1-204ENST00000558020 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
SNRPA1-204ENST00000558020 PRDM11Q9NQV5 511 aa19.6■□□□□ 0.73
SNRPA1-204ENST00000558020 PLCH1Q4KWH8 1693 aa19.59■□□□□ 0.73
SNRPA1-204ENST00000558020 PLEKHG3A1L390 1219 aa19.59■□□□□ 0.73
SNRPA1-204ENST00000558020 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
SNRPA1-204ENST00000558020 KRT27Q7Z3Y8 459 aa19.59■□□□□ 0.73
SNRPA1-204ENST00000558020 ALS2Q96Q42 1657 aa19.59■□□□□ 0.73
SNRPA1-204ENST00000558020 ACEP12821 1306 aa19.58■□□□□ 0.73
SNRPA1-204ENST00000558020 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-204ENST00000558020 ABCA3Q99758 1704 aa19.58■□□□□ 0.72
SNRPA1-204ENST00000558020 ATP7BP35670 1465 aa19.58■□□□□ 0.72
SNRPA1-204ENST00000558020 BLMP54132 1417 aaPredicted RBP19.58■□□□□ 0.72
SNRPA1-204ENST00000558020 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
SNRPA1-204ENST00000558020 COL14A1Q05707 1796 aaKnown RBP19.56■□□□□ 0.72
SNRPA1-204ENST00000558020 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
SNRPA1-204ENST00000558020 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
SNRPA1-204ENST00000558020 ABTB2Q8N961 1025 aa19.55■□□□□ 0.72
SNRPA1-204ENST00000558020 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
SNRPA1-204ENST00000558020 SPATA31A5Q5VU36 1347 aa19.52■□□□□ 0.72
SNRPA1-204ENST00000558020 SPATA31A7Q8IWB4 1347 aa19.52■□□□□ 0.72
SNRPA1-204ENST00000558020 EVA1CP58658 441 aa19.52■□□□□ 0.72
SNRPA1-204ENST00000558020 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.72
SNRPA1-204ENST00000558020 BRWD3Q6RI45 1802 aa19.52■□□□□ 0.72
SNRPA1-204ENST00000558020 ZC3H6P61129 1189 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-204ENST00000558020 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
SNRPA1-204ENST00000558020 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
SNRPA1-204ENST00000558020 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
SNRPA1-204ENST00000558020 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
SNRPA1-204ENST00000558020 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 CHRNA2Q15822 529 aa19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 STRN4Q9NRL3 753 aa19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
SNRPA1-204ENST00000558020 NRAPQ86VF7 1730 aa19.48■□□□□ 0.71
SNRPA1-204ENST00000558020 BAG6P46379 1132 aa19.47■□□□□ 0.71
SNRPA1-204ENST00000558020 DEFB132Q7Z7B7 95 aa19.47■□□□□ 0.71
SNRPA1-204ENST00000558020 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
SNRPA1-204ENST00000558020 CABP1Q9NZU7 370 aa19.46■□□□□ 0.71
SNRPA1-204ENST00000558020 SPATA31A1Q5TZJ5 1347 aa19.46■□□□□ 0.71
SNRPA1-204ENST00000558020 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
SNRPA1-204ENST00000558020 GCP02774 474 aa19.44■□□□□ 0.7
SNRPA1-204ENST00000558020 SRCAPQ6ZRS2 3230 aa19.44■□□□□ 0.7
SNRPA1-204ENST00000558020 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-204ENST00000558020 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
SNRPA1-204ENST00000558020 CPDO75976 1380 aa19.43■□□□□ 0.7
SNRPA1-204ENST00000558020 NLRP6P59044 892 aa19.42■□□□□ 0.7
SNRPA1-204ENST00000558020 USP35Q9P2H5 1018 aa19.42■□□□□ 0.7
SNRPA1-204ENST00000558020 USP19O94966 1318 aa19.42■□□□□ 0.7
SNRPA1-204ENST00000558020 QRICH2Q9H0J4 1663 aa19.42■□□□□ 0.7
SNRPA1-204ENST00000558020 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-204ENST00000558020 FAM196AQ6ZSG2 479 aa19.41■□□□□ 0.7
SNRPA1-204ENST00000558020 PDE3BQ13370 1112 aa19.4■□□□□ 0.7
SNRPA1-204ENST00000558020 BARGINQ6ZT62 677 aa19.4■□□□□ 0.7
SNRPA1-204ENST00000558020 FAM182BQ5T319 152 aa19.39■□□□□ 0.69
SNRPA1-204ENST00000558020 TCP11L2Q8N4U5 519 aa19.39■□□□□ 0.69
SNRPA1-204ENST00000558020 THRAP3Q9Y2W1 955 aaKnown RBP19.39■□□□□ 0.69
SNRPA1-204ENST00000558020 USP6P35125 1406 aa19.38■□□□□ 0.69
SNRPA1-204ENST00000558020 LARP1Q6PKG0 1096 aaKnown RBP19.38■□□□□ 0.69
SNRPA1-204ENST00000558020 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
SNRPA1-204ENST00000558020 TRPM1Q7Z4N2 1603 aa19.37■□□□□ 0.69
SNRPA1-204ENST00000558020 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
SNRPA1-204ENST00000558020 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
SNRPA1-204ENST00000558020 EN1Q05925 392 aaPredicted RBP19.35■□□□□ 0.69
SNRPA1-204ENST00000558020 CAMTA1Q9Y6Y1 1673 aa19.35■□□□□ 0.69
SNRPA1-204ENST00000558020 NRKQ7Z2Y5 1582 aa19.35■□□□□ 0.69
SNRPA1-204ENST00000558020 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
SNRPA1-204ENST00000558020 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
SNRPA1-204ENST00000558020 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
SNRPA1-204ENST00000558020 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.69
SNRPA1-204ENST00000558020 TRIM37O94972 964 aa19.33■□□□□ 0.68
SNRPA1-204ENST00000558020 RGPD1P0DJD0 1748 aa19.33■□□□□ 0.68
SNRPA1-204ENST00000558020 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
SNRPA1-204ENST00000558020 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
SNRPA1-204ENST00000558020 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
SNRPA1-204ENST00000558020 APBA3O96018 575 aa19.31■□□□□ 0.68
SNRPA1-204ENST00000558020 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
SNRPA1-204ENST00000558020 COL5A2P05997 1499 aaPredicted RBP19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 DISP2A7MBM2 1401 aa19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 CRB1P82279 1406 aa19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
SNRPA1-204ENST00000558020 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
SNRPA1-204ENST00000558020 SLIT3O75094 1523 aa19.27■□□□□ 0.68
SNRPA1-204ENST00000558020 SLC24A1O60721 1099 aa19.27■□□□□ 0.68
SNRPA1-204ENST00000558020 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
SNRPA1-204ENST00000558020 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-204ENST00000558020 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
SNRPA1-204ENST00000558020 TMC1Q8TDI8 760 aa19.26■□□□□ 0.67
SNRPA1-204ENST00000558020 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
SNRPA1-204ENST00000558020 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-204ENST00000558020 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-204ENST00000558020 SOX12O15370 315 aa19.25■□□□□ 0.67
SNRPA1-204ENST00000558020 DDB1Q16531 1140 aa19.25■□□□□ 0.67
SNRPA1-204ENST00000558020 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-204ENST00000558020 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
SNRPA1-204ENST00000558020 CSB-PGBD3P0DP91 1061 aa19.24■□□□□ 0.67
SNRPA1-204ENST00000558020 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms