RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
TMEM250-204ENST00000557985 POLR3AO14802 1390 aaPredicted RBP28.93■■■□□ 2.22
TMEM250-204ENST00000557985 NSD2O96028 1365 aa28.93■■■□□ 2.22
TMEM250-204ENST00000557985 TTC21BQ7Z4L5 1316 aa28.91■■■□□ 2.22
TMEM250-204ENST00000557985 USP6P35125 1406 aa28.91■■■□□ 2.22
TMEM250-204ENST00000557985 MSH6P52701 1360 aa28.9■■■□□ 2.22
TMEM250-204ENST00000557985 KIF20BQ96Q89 1820 aa28.89■■■□□ 2.22
TMEM250-204ENST00000557985 PNISRQ8TF01 805 aaKnown RBP28.89■■■□□ 2.22
TMEM250-204ENST00000557985 GTF3C3Q9Y5Q9 886 aa28.89■■■□□ 2.22
TMEM250-204ENST00000557985 CADPS2Q86UW7 1296 aa28.88■■■□□ 2.21
TMEM250-204ENST00000557985 FBLN1P23142 703 aa28.86■■■□□ 2.21
TMEM250-204ENST00000557985 C1orf167Q5SNV9 1468 aa28.86■■■□□ 2.21
TMEM250-204ENST00000557985 FOXO3O43524 673 aa28.86■■■□□ 2.21
TMEM250-204ENST00000557985 PSME1Q06323 249 aa28.85■■■□□ 2.21
TMEM250-204ENST00000557985 PAK3O75914 559 aaPredicted RBP28.84■■■□□ 2.21
TMEM250-204ENST00000557985 MST1RQ04912 1400 aa28.83■■■□□ 2.21
TMEM250-204ENST00000557985 SSH2Q76I76 1423 aa28.83■■■□□ 2.21
TMEM250-204ENST00000557985 DCCP43146 1447 aa28.83■■■□□ 2.21
TMEM250-204ENST00000557985 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.2
TMEM250-204ENST00000557985 MTHFSP49914 203 aa28.82■■■□□ 2.2
TMEM250-204ENST00000557985 XPCQ01831 940 aaPredicted RBP28.82■■■□□ 2.2
TMEM250-204ENST00000557985 COG3Q96JB2 828 aa28.82■■■□□ 2.2
TMEM250-204ENST00000557985 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
TMEM250-204ENST00000557985 NUTM2GQ5VZR2 741 aa28.79■■■□□ 2.2
TMEM250-204ENST00000557985 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
TMEM250-204ENST00000557985 DDX17Q92841 729 aaKnown RBP28.77■■■□□ 2.2
TMEM250-204ENST00000557985 ABTB2Q8N961 1025 aa28.75■■■□□ 2.19
TMEM250-204ENST00000557985 SLAIN2Q9P270 581 aa28.75■■■□□ 2.19
TMEM250-204ENST00000557985 NLRP6P59044 892 aa28.73■■■□□ 2.19
TMEM250-204ENST00000557985 KRT28Q7Z3Y7 464 aa28.73■■■□□ 2.19
TMEM250-204ENST00000557985 SENP3-EIF4A1A0A087X0R7 540 aa28.73■■■□□ 2.19
TMEM250-204ENST00000557985 PPM1GO15355 546 aaPredicted RBP28.73■■■□□ 2.19
TMEM250-204ENST00000557985 SOX12O15370 315 aa28.73■■■□□ 2.19
TMEM250-204ENST00000557985 HNRNPUQ00839 825 aaKnown RBP eCLIP28.73■■■□□ 2.19
TMEM250-204ENST00000557985 MAP2P11137 1827 aaKnown RBP28.72■■■□□ 2.19
TMEM250-204ENST00000557985 POLKQ9UBT6 870 aa28.71■■■□□ 2.19
TMEM250-204ENST00000557985 ADAMTS8Q9UP79 889 aa28.7■■■□□ 2.19
TMEM250-204ENST00000557985 RRS1Q15050 365 aaKnown RBP28.7■■■□□ 2.18
TMEM250-204ENST00000557985 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
TMEM250-204ENST00000557985 PIK3C2AO00443 1686 aa28.69■■■□□ 2.18
TMEM250-204ENST00000557985 OVOS2A0A0J9YW53 1432 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 OVOS2Q6IE36 1432 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 WDR43Q15061 677 aaKnown RBP eCLIP28.68■■■□□ 2.18
TMEM250-204ENST00000557985 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 BRINP3Q76B58 766 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 CFAP53Q96M91 514 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 EMILIN1Q9Y6C2 1016 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 KIF1AQ12756 1690 aa28.68■■■□□ 2.18
TMEM250-204ENST00000557985 PLEKHG5O94827 1062 aa28.66■■■□□ 2.18
TMEM250-204ENST00000557985 USP31Q70CQ4 1352 aa28.66■■■□□ 2.18
TMEM250-204ENST00000557985 AATKQ6ZMQ8 1374 aa28.63■■■□□ 2.17
TMEM250-204ENST00000557985 NPHP3Q7Z494 1330 aa28.61■■■□□ 2.17
TMEM250-204ENST00000557985 TRPM3Q9HCF6 1732 aaPredicted RBP28.58■■■□□ 2.17
TMEM250-204ENST00000557985 MARF1Q9Y4F3 1742 aaKnown RBP28.58■■■□□ 2.17
TMEM250-204ENST00000557985 PNPLA6Q8IY17 1366 aa28.56■■■□□ 2.16
TMEM250-204ENST00000557985 SHPRHQ149N8 1683 aa28.56■■■□□ 2.16
TMEM250-204ENST00000557985 DIAPH1O60610 1272 aaKnown RBP28.55■■■□□ 2.16
TMEM250-204ENST00000557985 CCDC146Q8IYE0 955 aa28.55■■■□□ 2.16
TMEM250-204ENST00000557985 U2SURPO15042 1029 aaKnown RBP28.55■■■□□ 2.16
TMEM250-204ENST00000557985 SALL2Q9Y467 1007 aaPredicted RBP28.55■■■□□ 2.16
TMEM250-204ENST00000557985 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
TMEM250-204ENST00000557985 U2AF1L5P0DN76 240 aaPredicted RBP28.53■■■□□ 2.16
TMEM250-204ENST00000557985 U2AF1Q01081 240 aaKnown RBP eCLIP28.53■■■□□ 2.16
TMEM250-204ENST00000557985 COL3A1P02461 1466 aaPredicted RBP28.53■■■□□ 2.16
TMEM250-204ENST00000557985 NUDCQ9Y266 331 aa28.52■■■□□ 2.16
TMEM250-204ENST00000557985 PXDNQ92626 1479 aa28.52■■■□□ 2.16
TMEM250-204ENST00000557985 HSP90AB2PQ58FF8 381 aa28.51■■■□□ 2.15
TMEM250-204ENST00000557985 INSRP06213 1382 aa28.51■■■□□ 2.15
TMEM250-204ENST00000557985 SMG6Q86US8 1419 aaKnown RBP28.51■■■□□ 2.15
TMEM250-204ENST00000557985 SBNO1A3KN83 1393 aa28.5■■■□□ 2.15
TMEM250-204ENST00000557985 USP54Q70EL1 1684 aa28.5■■■□□ 2.15
TMEM250-204ENST00000557985 AMPHP49418 695 aa28.5■■■□□ 2.15
TMEM250-204ENST00000557985 GCP02774 474 aa28.49■■■□□ 2.15
TMEM250-204ENST00000557985 BLMP54132 1417 aaPredicted RBP28.49■■■□□ 2.15
TMEM250-204ENST00000557985 SPATA31A3Q5VYP0 1347 aa28.48■■■□□ 2.15
TMEM250-204ENST00000557985 ALS2Q96Q42 1657 aa28.48■■■□□ 2.15
TMEM250-204ENST00000557985 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
TMEM250-204ENST00000557985 ZBTB7CA1YPR0 619 aa28.48■■■□□ 2.15
TMEM250-204ENST00000557985 PEAK1Q9H792 1746 aa28.47■■■□□ 2.15
TMEM250-204ENST00000557985 SOS2Q07890 1332 aaPredicted RBP28.47■■■□□ 2.15
TMEM250-204ENST00000557985 IL13P35225 146 aa28.47■■■□□ 2.15
TMEM250-204ENST00000557985 KCNH5Q8NCM2 988 aa28.47■■■□□ 2.15
TMEM250-204ENST00000557985 CABLES1Q8TDN4 633 aa28.46■■■□□ 2.15
TMEM250-204ENST00000557985 ZBED9Q6R2W3 1325 aa28.45■■■□□ 2.15
TMEM250-204ENST00000557985 TNS3Q68CZ2 1445 aa28.45■■■□□ 2.14
TMEM250-204ENST00000557985 EIF4A2Q14240 407 aaKnown RBP28.43■■■□□ 2.14
TMEM250-204ENST00000557985 USP19O94966 1318 aa28.43■■■□□ 2.14
TMEM250-204ENST00000557985 APAF1O14727 1248 aa28.42■■■□□ 2.14
TMEM250-204ENST00000557985 PIP4K2BP78356 416 aa28.42■■■□□ 2.14
TMEM250-204ENST00000557985 HOXC9P31274 260 aa28.41■■■□□ 2.14
TMEM250-204ENST00000557985 ROBO1Q9Y6N7 1651 aa28.41■■■□□ 2.14
TMEM250-204ENST00000557985 NFAT5O94916 1531 aa28.41■■■□□ 2.14
TMEM250-204ENST00000557985 ZC3H6P61129 1189 aaKnown RBP28.41■■■□□ 2.14
TMEM250-204ENST00000557985 FLT4P35916 1363 aa28.4■■■□□ 2.14
TMEM250-204ENST00000557985 TOM1O60784 492 aa28.4■■■□□ 2.14
TMEM250-204ENST00000557985 HMOX1P09601 288 aa28.4■■■□□ 2.14
TMEM250-204ENST00000557985 LTN1O94822 1766 aa28.39■■■□□ 2.14
TMEM250-204ENST00000557985 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
TMEM250-204ENST00000557985 RUNDC1Q96C34 613 aa28.39■■■□□ 2.14
TMEM250-204ENST00000557985 SLIT3O75094 1523 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms