RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SLC10A3P09131 477 aa5.78□□□□□ -1.48
TDP1-217ENST00000557782 FBXO45P0C2W1 286 aa5.78□□□□□ -1.48
TDP1-217ENST00000557782 RASA1P20936 1047 aa5.78□□□□□ -1.48
TDP1-217ENST00000557782 VAMP1P23763 118 aa5.78□□□□□ -1.48
TDP1-217ENST00000557782 HDGFP51858 240 aaKnown RBP5.78□□□□□ -1.48
TDP1-217ENST00000557782 SWI5Q1ZZU3 235 aa5.78□□□□□ -1.48
TDP1-217ENST00000557782 CRTC2Q53ET0 693 aaPredicted RBP5.78□□□□□ -1.48
TDP1-217ENST00000557782 POTEFA5A3E0 1075 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 HAX1O00165 279 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 PER1O15534 1290 aaPredicted RBP5.77□□□□□ -1.49
TDP1-217ENST00000557782 LZTS3O60299 673 aaPredicted RBP5.77□□□□□ -1.49
TDP1-217ENST00000557782 ZC3H6P61129 1189 aaKnown RBP5.77□□□□□ -1.49
TDP1-217ENST00000557782 PTK7Q13308 1070 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 ARSIQ5FYB1 569 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 DESI1Q6ICB0 168 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 RETREG3Q86VR2 466 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 NPAS4Q8IUM7 802 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 DCBLD2Q96PD2 775 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 ZSWIM6Q9HCJ5 1215 aa5.77□□□□□ -1.49
TDP1-217ENST00000557782 ZC3H4Q9UPT8 1303 aaKnown RBP5.76□□□□□ -1.49
TDP1-217ENST00000557782 FUT2Q10981 343 aa5.76□□□□□ -1.49
TDP1-217ENST00000557782 SLFNL1Q499Z3 407 aa5.76□□□□□ -1.49
TDP1-217ENST00000557782 NOM1Q5C9Z4 860 aaKnown RBP5.76□□□□□ -1.49
TDP1-217ENST00000557782 SWT1Q5T5J6 900 aaKnown RBP5.76□□□□□ -1.49
TDP1-217ENST00000557782 ANKMY2Q8IV38 441 aa5.76□□□□□ -1.49
TDP1-217ENST00000557782 PELP1Q8IZL8 1130 aaKnown RBP5.76□□□□□ -1.49
TDP1-217ENST00000557782 DEPDC4Q8N2C3 294 aa5.76□□□□□ -1.49
TDP1-217ENST00000557782 C1orf216Q8TAB5 229 aa5.76□□□□□ -1.49
TDP1-217ENST00000557782 KHSRPQ92945 711 aaKnown RBP eCLIP5.76□□□□□ -1.49
TDP1-217ENST00000557782 ATP6V1AP38606 617 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 FAM69CQ0P6D2 419 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 NCOA4Q13772 614 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 SF3A1Q15459 793 aaKnown RBP5.75□□□□□ -1.49
TDP1-217ENST00000557782 FAM174AQ8TBP5 190 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 SYMPKQ92797 1274 aaKnown RBP5.75□□□□□ -1.49
TDP1-217ENST00000557782 KCNH8Q96L42 1107 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 SLAIN2Q9P270 581 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 EGFL7Q9UHF1 273 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 FKBPLQ9UIM3 349 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 METRNQ9UJH8 293 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 LHX6Q9UPM6 363 aa5.75□□□□□ -1.49
TDP1-217ENST00000557782 MCCD1P59942 119 aaPredicted RBP5.74□□□□□ -1.49
TDP1-217ENST00000557782 EML3Q32P44 896 aa5.74□□□□□ -1.49
TDP1-217ENST00000557782 RNF135Q8IUD6 432 aa5.74□□□□□ -1.49
TDP1-217ENST00000557782 UBXN4Q92575 508 aa5.74□□□□□ -1.49
TDP1-217ENST00000557782 ABL1P00519 1130 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 CFHP08603 1231 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 ATP1A2P50993 1020 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 DPYDQ12882 1025 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 PROX2Q3B8N5 592 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 Q3C1V9 767 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 LYPD8Q6UX82 237 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 TRIM50Q86XT4 487 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 GLYCTKQ8IVS8 523 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 PLPP7Q8NBV4 271 aa5.73□□□□□ -1.49
TDP1-217ENST00000557782 H3BRB1 525 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 MAPK1P28482 360 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 MAP7D1Q3KQU3 841 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 KMT5BQ4FZB7 885 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 GPR153Q6NV75 609 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 ZSCAN29Q8IWY8 852 aaPredicted RBP5.72□□□□□ -1.49
TDP1-217ENST00000557782 OGFOD1Q8N543 542 aa5.72□□□□□ -1.49
TDP1-217ENST00000557782 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
TDP1-217ENST00000557782 RBM19Q9Y4C8 960 aaKnown RBP5.72□□□□□ -1.49
TDP1-217ENST00000557782 NAALADL2Q58DX5 795 aa5.71□□□□□ -1.5
TDP1-217ENST00000557782 ZNF594Q96JF6 807 aaPredicted RBP5.71□□□□□ -1.5
TDP1-217ENST00000557782 DNAAF2Q9NVR5 837 aaKnown RBP5.71□□□□□ -1.5
TDP1-217ENST00000557782 KIAA1468Q9P260 1216 aa5.71□□□□□ -1.5
TDP1-217ENST00000557782 CEP126Q9P2H0 1117 aa5.71□□□□□ -1.5
TDP1-217ENST00000557782 PPM1GO15355 546 aaPredicted RBP5.7□□□□□ -1.5
TDP1-217ENST00000557782 RECKO95980 971 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 EVX2Q03828 476 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 FBXO33Q7Z6M2 555 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 SPATA32Q96LK8 384 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 ASB16Q96NS5 453 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 CXXC1Q9P0U4 656 aaPredicted RBP5.7□□□□□ -1.5
TDP1-217ENST00000557782 PPP1R1BQ9UD71 204 aaPredicted RBP5.7□□□□□ -1.5
TDP1-217ENST00000557782 DCTN4Q9UJW0 460 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 NOD1Q9Y239 953 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 GPSM3Q9Y4H4 160 aa5.7□□□□□ -1.5
TDP1-217ENST00000557782 PRMT3O60678 531 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 ICMTO60725 284 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 PTK2Q05397 1052 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 ZNF211Q13398 564 aaPredicted RBP5.69□□□□□ -1.5
TDP1-217ENST00000557782 TSNAXIP1Q2TAA8 658 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 LARGE2Q8N3Y3 721 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 KCNK17Q96T54 332 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 PCDHB9Q9Y5E1 797 aa5.69□□□□□ -1.5
TDP1-217ENST00000557782 C21orf2O43822 256 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
TDP1-217ENST00000557782 RNF40O75150 1001 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 GABBR2O75899 941 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 F12P00748 615 aaPredicted RBP5.68□□□□□ -1.5
TDP1-217ENST00000557782 HOXB3P14651 431 aaPredicted RBP5.68□□□□□ -1.5
TDP1-217ENST00000557782 NCLP19338 710 aaKnown RBP5.68□□□□□ -1.5
TDP1-217ENST00000557782 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
TDP1-217ENST00000557782 SCNN1AP37088 669 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 KCNH2Q12809 1159 aa5.68□□□□□ -1.5
TDP1-217ENST00000557782 EAPPQ56P03 285 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms