RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 DCCP43146 1447 aa12.92□□□□□ -0.34
CHD8-214ENST00000557727 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
CHD8-214ENST00000557727 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
CHD8-214ENST00000557727 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
CHD8-214ENST00000557727 TRAK1Q9UPV9 953 aa12.9□□□□□ -0.34
CHD8-214ENST00000557727 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
CHD8-214ENST00000557727 MST1RQ04912 1400 aa12.88□□□□□ -0.35
CHD8-214ENST00000557727 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
CHD8-214ENST00000557727 MSH6P52701 1360 aa12.88□□□□□ -0.35
CHD8-214ENST00000557727 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
CHD8-214ENST00000557727 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
CHD8-214ENST00000557727 IER5LQ5T953 404 aa12.87□□□□□ -0.35
CHD8-214ENST00000557727 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
CHD8-214ENST00000557727 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
CHD8-214ENST00000557727 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
CHD8-214ENST00000557727 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
CHD8-214ENST00000557727 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
CHD8-214ENST00000557727 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
CHD8-214ENST00000557727 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
CHD8-214ENST00000557727 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD8-214ENST00000557727 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
CHD8-214ENST00000557727 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
CHD8-214ENST00000557727 SEC24BO95487 1268 aa12.83□□□□□ -0.36
CHD8-214ENST00000557727 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
CHD8-214ENST00000557727 USP47Q96K76 1375 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 POGKQ9P215 609 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 ATP7BP35670 1465 aa12.82□□□□□ -0.36
CHD8-214ENST00000557727 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
CHD8-214ENST00000557727 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
CHD8-214ENST00000557727 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
CHD8-214ENST00000557727 TESK2Q96S53 571 aa12.81□□□□□ -0.36
CHD8-214ENST00000557727 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
CHD8-214ENST00000557727 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
CHD8-214ENST00000557727 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
CHD8-214ENST00000557727 EIF3AQ14152 1382 aaKnown RBP12.81□□□□□ -0.36
CHD8-214ENST00000557727 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
CHD8-214ENST00000557727 POTEMA6NI47 508 aa12.8□□□□□ -0.36
CHD8-214ENST00000557727 TOM1O60784 492 aa12.8□□□□□ -0.36
CHD8-214ENST00000557727 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
CHD8-214ENST00000557727 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
CHD8-214ENST00000557727 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
CHD8-214ENST00000557727 ATF3P18847 181 aa12.79□□□□□ -0.36
CHD8-214ENST00000557727 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
CHD8-214ENST00000557727 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
CHD8-214ENST00000557727 BRINP3Q76B58 766 aa12.78□□□□□ -0.36
CHD8-214ENST00000557727 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
CHD8-214ENST00000557727 MYOM1P52179 1685 aa12.77□□□□□ -0.36
CHD8-214ENST00000557727 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
CHD8-214ENST00000557727 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CHD8-214ENST00000557727 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
CHD8-214ENST00000557727 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
CHD8-214ENST00000557727 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
CHD8-214ENST00000557727 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
CHD8-214ENST00000557727 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
CHD8-214ENST00000557727 PIP4K2BP78356 416 aa12.75□□□□□ -0.37
CHD8-214ENST00000557727 PXDNQ92626 1479 aa12.75□□□□□ -0.37
CHD8-214ENST00000557727 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
CHD8-214ENST00000557727 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
CHD8-214ENST00000557727 PYGBP11216 843 aa12.74□□□□□ -0.37
CHD8-214ENST00000557727 HSPA5P11021 654 aaKnown RBP12.73□□□□□ -0.37
CHD8-214ENST00000557727 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
CHD8-214ENST00000557727 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
CHD8-214ENST00000557727 EVC2Q86UK5 1308 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
CHD8-214ENST00000557727 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
CHD8-214ENST00000557727 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
CHD8-214ENST00000557727 SHPRHQ149N8 1683 aa12.71□□□□□ -0.37
CHD8-214ENST00000557727 HSPA1LP34931 641 aa12.71□□□□□ -0.37
CHD8-214ENST00000557727 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.38
CHD8-214ENST00000557727 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
CHD8-214ENST00000557727 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD8-214ENST00000557727 GSE1Q14687 1217 aa12.7□□□□□ -0.38
CHD8-214ENST00000557727 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
CHD8-214ENST00000557727 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
CHD8-214ENST00000557727 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
CHD8-214ENST00000557727 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
CHD8-214ENST00000557727 SOS2Q07890 1332 aaPredicted RBP12.69□□□□□ -0.38
CHD8-214ENST00000557727 MARF1Q9Y4F3 1742 aaKnown RBP12.69□□□□□ -0.38
CHD8-214ENST00000557727 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
CHD8-214ENST00000557727 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
CHD8-214ENST00000557727 PUS7Q96PZ0 661 aaKnown RBP12.69□□□□□ -0.38
CHD8-214ENST00000557727 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
CHD8-214ENST00000557727 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
CHD8-214ENST00000557727 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
CHD8-214ENST00000557727 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
CHD8-214ENST00000557727 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
CHD8-214ENST00000557727 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
CHD8-214ENST00000557727 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
CHD8-214ENST00000557727 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
CHD8-214ENST00000557727 FOXO3O43524 673 aa12.67□□□□□ -0.38
CHD8-214ENST00000557727 PLCG2P16885 1265 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms