RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
RD3L-201ENST00000557640 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
RD3L-201ENST00000557640 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
RD3L-201ENST00000557640 E9PCH4 1651 aa12.62□□□□□ -0.39
RD3L-201ENST00000557640 DIP2AQ14689 1571 aa12.62□□□□□ -0.39
RD3L-201ENST00000557640 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
RD3L-201ENST00000557640 RRP7BPQ9NSQ0 103 aa12.62□□□□□ -0.39
RD3L-201ENST00000557640 UNC13BO14795 1591 aa12.61□□□□□ -0.39
RD3L-201ENST00000557640 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
RD3L-201ENST00000557640 SLC34A2O95436 690 aa12.61□□□□□ -0.39
RD3L-201ENST00000557640 IDI1Q13907 227 aa12.61□□□□□ -0.39
RD3L-201ENST00000557640 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
RD3L-201ENST00000557640 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
RD3L-201ENST00000557640 TMC2Q8TDI7 906 aa12.6□□□□□ -0.39
RD3L-201ENST00000557640 NRXN3Q9Y4C0 1643 aa12.59□□□□□ -0.39
RD3L-201ENST00000557640 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
RD3L-201ENST00000557640 KCNA6P17658 529 aa12.59□□□□□ -0.39
RD3L-201ENST00000557640 EID1Q9Y6B2 187 aa12.58□□□□□ -0.4
RD3L-201ENST00000557640 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
RD3L-201ENST00000557640 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
RD3L-201ENST00000557640 STK25O00506 426 aa12.57□□□□□ -0.4
RD3L-201ENST00000557640 PLEKHG1Q9ULL1 1385 aa12.56□□□□□ -0.4
RD3L-201ENST00000557640 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
RD3L-201ENST00000557640 NHSL1Q5SYE7 1610 aa12.56□□□□□ -0.4
RD3L-201ENST00000557640 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
RD3L-201ENST00000557640 RPRD2Q5VT52 1461 aaKnown RBP12.56□□□□□ -0.4
RD3L-201ENST00000557640 MSH6P52701 1360 aa12.56□□□□□ -0.4
RD3L-201ENST00000557640 KANK1Q14678 1352 aa12.56□□□□□ -0.4
RD3L-201ENST00000557640 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
RD3L-201ENST00000557640 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
RD3L-201ENST00000557640 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
RD3L-201ENST00000557640 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
RD3L-201ENST00000557640 JCADQ9P266 1359 aa12.55□□□□□ -0.4
RD3L-201ENST00000557640 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
RD3L-201ENST00000557640 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
RD3L-201ENST00000557640 PTPRUQ92729 1446 aa12.53□□□□□ -0.4
RD3L-201ENST00000557640 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
RD3L-201ENST00000557640 ASXL1Q8IXJ9 1541 aa12.51□□□□□ -0.41
RD3L-201ENST00000557640 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
RD3L-201ENST00000557640 ANKRD50Q9ULJ7 1429 aa12.5□□□□□ -0.41
RD3L-201ENST00000557640 TRPM2O94759 1503 aa12.5□□□□□ -0.41
RD3L-201ENST00000557640 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
RD3L-201ENST00000557640 SPHKAPQ2M3C7 1700 aa12.49□□□□□ -0.41
RD3L-201ENST00000557640 TK2O00142 265 aa12.49□□□□□ -0.41
RD3L-201ENST00000557640 PSEN2P49810 448 aa12.49□□□□□ -0.41
RD3L-201ENST00000557640 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
RD3L-201ENST00000557640 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
RD3L-201ENST00000557640 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
RD3L-201ENST00000557640 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
RD3L-201ENST00000557640 RGS12O14924 1447 aa12.46□□□□□ -0.41
RD3L-201ENST00000557640 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.41
RD3L-201ENST00000557640 HRO43593 1189 aa12.46□□□□□ -0.41
RD3L-201ENST00000557640 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
RD3L-201ENST00000557640 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
RD3L-201ENST00000557640 MST1RQ04912 1400 aa12.45□□□□□ -0.42
RD3L-201ENST00000557640 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
RD3L-201ENST00000557640 LAMC1P11047 1609 aa12.44□□□□□ -0.42
RD3L-201ENST00000557640 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
RD3L-201ENST00000557640 EP400Q96L91 3159 aa12.44□□□□□ -0.42
RD3L-201ENST00000557640 CDK12Q9NYV4 1490 aaPredicted RBP12.44□□□□□ -0.42
RD3L-201ENST00000557640 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
RD3L-201ENST00000557640 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
RD3L-201ENST00000557640 BCANQ96GW7 911 aa12.43□□□□□ -0.42
RD3L-201ENST00000557640 DCCP43146 1447 aa12.43□□□□□ -0.42
RD3L-201ENST00000557640 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
RD3L-201ENST00000557640 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
RD3L-201ENST00000557640 TBX22Q9Y458 520 aa12.42□□□□□ -0.42
RD3L-201ENST00000557640 PIK3R4Q99570 1358 aa12.42□□□□□ -0.42
RD3L-201ENST00000557640 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
RD3L-201ENST00000557640 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
RD3L-201ENST00000557640 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
RD3L-201ENST00000557640 SETD5Q9C0A6 1442 aa12.41□□□□□ -0.42
RD3L-201ENST00000557640 PPP1R37O75864 691 aa12.39□□□□□ -0.43
RD3L-201ENST00000557640 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
RD3L-201ENST00000557640 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
RD3L-201ENST00000557640 METP08581 1390 aa12.39□□□□□ -0.43
RD3L-201ENST00000557640 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
RD3L-201ENST00000557640 AFF2P51816 1311 aa12.38□□□□□ -0.43
RD3L-201ENST00000557640 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
RD3L-201ENST00000557640 PTPN5P54829 565 aa12.38□□□□□ -0.43
RD3L-201ENST00000557640 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
RD3L-201ENST00000557640 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
RD3L-201ENST00000557640 C19orf44Q9H6X5 657 aa12.38□□□□□ -0.43
RD3L-201ENST00000557640 MARF1Q9Y4F3 1742 aaKnown RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 ZNF772Q68DY9 489 aaPredicted RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
RD3L-201ENST00000557640 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
RD3L-201ENST00000557640 TBC1D12O60347 775 aa12.36□□□□□ -0.43
RD3L-201ENST00000557640 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
RD3L-201ENST00000557640 KIF1BO60333 1816 aa12.36□□□□□ -0.43
RD3L-201ENST00000557640 ROCK1Q13464 1354 aa12.35□□□□□ -0.43
RD3L-201ENST00000557640 ATF3P18847 181 aa12.35□□□□□ -0.43
RD3L-201ENST00000557640 PLPP6Q8IY26 295 aa12.35□□□□□ -0.43
RD3L-201ENST00000557640 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
RD3L-201ENST00000557640 RXRBP28702 533 aa12.34□□□□□ -0.43
RD3L-201ENST00000557640 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms