RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
SLIRP-210ENST00000557431 FAM182BQ5T319 152 aa20.74■□□□□ 0.91
SLIRP-210ENST00000557431 KRT27Q7Z3Y8 459 aa20.74■□□□□ 0.91
SLIRP-210ENST00000557431 TOPAZ1Q8N9V7 1692 aa20.73■□□□□ 0.91
SLIRP-210ENST00000557431 TNS1Q9HBL0 1735 aaKnown RBP20.73■□□□□ 0.91
SLIRP-210ENST00000557431 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
SLIRP-210ENST00000557431 WASLO00401 505 aaPredicted RBP20.72■□□□□ 0.91
SLIRP-210ENST00000557431 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
SLIRP-210ENST00000557431 ATP7BP35670 1465 aa20.72■□□□□ 0.91
SLIRP-210ENST00000557431 THSD7AQ9UPZ6 1657 aa20.72■□□□□ 0.91
SLIRP-210ENST00000557431 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
SLIRP-210ENST00000557431 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
SLIRP-210ENST00000557431 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
SLIRP-210ENST00000557431 PSDA5PKW4 1024 aaPredicted RBP20.68■□□□□ 0.9
SLIRP-210ENST00000557431 EIF3AQ14152 1382 aaKnown RBP20.68■□□□□ 0.9
SLIRP-210ENST00000557431 LRP5O75197 1615 aa20.67■□□□□ 0.9
SLIRP-210ENST00000557431 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
SLIRP-210ENST00000557431 CHRNA2Q15822 529 aa20.66■□□□□ 0.9
SLIRP-210ENST00000557431 KIAA1210Q9ULL0 1709 aa20.66■□□□□ 0.9
SLIRP-210ENST00000557431 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
SLIRP-210ENST00000557431 KIAA0232Q92628 1395 aa20.64■□□□□ 0.89
SLIRP-210ENST00000557431 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
SLIRP-210ENST00000557431 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
SLIRP-210ENST00000557431 NUDT16Q96DE0 195 aaKnown RBP20.64■□□□□ 0.89
SLIRP-210ENST00000557431 NRKQ7Z2Y5 1582 aa20.63■□□□□ 0.89
SLIRP-210ENST00000557431 EN1Q05925 392 aaPredicted RBP20.63■□□□□ 0.89
SLIRP-210ENST00000557431 BAG6P46379 1132 aa20.62■□□□□ 0.89
SLIRP-210ENST00000557431 STRN4Q9NRL3 753 aa20.62■□□□□ 0.89
SLIRP-210ENST00000557431 ZC3H6P61129 1189 aaKnown RBP20.61■□□□□ 0.89
SLIRP-210ENST00000557431 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
SLIRP-210ENST00000557431 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
SLIRP-210ENST00000557431 LMO7Q8WWI1 1683 aa20.58■□□□□ 0.88
SLIRP-210ENST00000557431 ACEP12821 1306 aa20.57■□□□□ 0.88
SLIRP-210ENST00000557431 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
SLIRP-210ENST00000557431 SPATA31A1Q5TZJ5 1347 aa20.56■□□□□ 0.88
SLIRP-210ENST00000557431 NBPF1Q3BBV0 1214 aa20.56■□□□□ 0.88
SLIRP-210ENST00000557431 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
SLIRP-210ENST00000557431 RREB1Q92766 1687 aa20.55■□□□□ 0.88
SLIRP-210ENST00000557431 RGPD5Q99666 1765 aa20.55■□□□□ 0.88
SLIRP-210ENST00000557431 POLR3AO14802 1390 aaPredicted RBP20.55■□□□□ 0.88
SLIRP-210ENST00000557431 NUP188Q5SRE5 1749 aa20.55■□□□□ 0.88
SLIRP-210ENST00000557431 HRCP23327 699 aa20.54■□□□□ 0.88
SLIRP-210ENST00000557431 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
SLIRP-210ENST00000557431 R3HDM1Q15032 1099 aaKnown RBP20.53■□□□□ 0.88
SLIRP-210ENST00000557431 NBPF8Q3BBV2 869 aa20.53■□□□□ 0.88
SLIRP-210ENST00000557431 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
SLIRP-210ENST00000557431 TRIM37O94972 964 aa20.52■□□□□ 0.88
SLIRP-210ENST00000557431 SBF2Q86WG5 1849 aa20.52■□□□□ 0.88
SLIRP-210ENST00000557431 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
SLIRP-210ENST00000557431 WNK3Q9BYP7 1800 aa20.5■□□□□ 0.87
SLIRP-210ENST00000557431 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
SLIRP-210ENST00000557431 ABTB2Q8N961 1025 aa20.5■□□□□ 0.87
SLIRP-210ENST00000557431 CCDC61Q9Y6R9 512 aa20.5■□□□□ 0.87
SLIRP-210ENST00000557431 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
SLIRP-210ENST00000557431 LARP1Q6PKG0 1096 aaKnown RBP20.49■□□□□ 0.87
SLIRP-210ENST00000557431 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
SLIRP-210ENST00000557431 DISP2A7MBM2 1401 aa20.49■□□□□ 0.87
SLIRP-210ENST00000557431 ZBTB7CA1YPR0 619 aa20.48■□□□□ 0.87
SLIRP-210ENST00000557431 EVA1CP58658 441 aa20.48■□□□□ 0.87
SLIRP-210ENST00000557431 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
SLIRP-210ENST00000557431 PIK3C2AO00443 1686 aa20.48■□□□□ 0.87
SLIRP-210ENST00000557431 PLEKHG3A1L390 1219 aa20.47■□□□□ 0.87
SLIRP-210ENST00000557431 TRPM1Q7Z4N2 1603 aa20.46■□□□□ 0.87
SLIRP-210ENST00000557431 USP19O94966 1318 aa20.46■□□□□ 0.87
SLIRP-210ENST00000557431 COL18A1P39060 1754 aa20.46■□□□□ 0.87
SLIRP-210ENST00000557431 AKAP12Q02952 1782 aa20.46■□□□□ 0.87
SLIRP-210ENST00000557431 APBA3O96018 575 aa20.45■□□□□ 0.86
SLIRP-210ENST00000557431 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
SLIRP-210ENST00000557431 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
SLIRP-210ENST00000557431 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
SLIRP-210ENST00000557431 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
SLIRP-210ENST00000557431 COL5A2P05997 1499 aaPredicted RBP20.43■□□□□ 0.86
SLIRP-210ENST00000557431 PEAK1Q9H792 1746 aa20.43■□□□□ 0.86
SLIRP-210ENST00000557431 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
SLIRP-210ENST00000557431 CPDO75976 1380 aa20.42■□□□□ 0.86
SLIRP-210ENST00000557431 GCP02774 474 aa20.41■□□□□ 0.86
SLIRP-210ENST00000557431 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
SLIRP-210ENST00000557431 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
SLIRP-210ENST00000557431 SLIT3O75094 1523 aa20.41■□□□□ 0.86
SLIRP-210ENST00000557431 USP6P35125 1406 aa20.4■□□□□ 0.86
SLIRP-210ENST00000557431 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
SLIRP-210ENST00000557431 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
SLIRP-210ENST00000557431 NLRP6P59044 892 aa20.37■□□□□ 0.85
SLIRP-210ENST00000557431 CRB1P82279 1406 aa20.36■□□□□ 0.85
SLIRP-210ENST00000557431 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
SLIRP-210ENST00000557431 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
SLIRP-210ENST00000557431 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
SLIRP-210ENST00000557431 SOX12O15370 315 aa20.34■□□□□ 0.85
SLIRP-210ENST00000557431 RGPD3A6NKT7 1758 aaPredicted RBP20.34■□□□□ 0.85
SLIRP-210ENST00000557431 RGPD4Q7Z3J3 1758 aa20.34■□□□□ 0.85
SLIRP-210ENST00000557431 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.85
SLIRP-210ENST00000557431 PARD3Q8TEW0 1356 aa20.33■□□□□ 0.84
SLIRP-210ENST00000557431 LTN1O94822 1766 aa20.32■□□□□ 0.84
SLIRP-210ENST00000557431 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
SLIRP-210ENST00000557431 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
SLIRP-210ENST00000557431 THRAP3Q9Y2W1 955 aaKnown RBP20.31■□□□□ 0.84
SLIRP-210ENST00000557431 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
SLIRP-210ENST00000557431 OVOS2A0A0J9YW53 1432 aa20.3■□□□□ 0.84
SLIRP-210ENST00000557431 OVOS2Q6IE36 1432 aa20.3■□□□□ 0.84
SLIRP-210ENST00000557431 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms