RNA–Protein interactions for RNA: ENST00000557399.1

LINC00645-203, long intergenic non-protein coding RNA 645, humanhuman

TSL 1 (best) BASIC

Gene LINC00645, Length 3,512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00645-203ENST00000557399 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
LINC00645-203ENST00000557399 TESPA1A2RU30 521 aaPredicted RBP4.33□□□□□ -1.72
LINC00645-203ENST00000557399 NYAP1Q6ZVC0 841 aa4.33□□□□□ -1.72
LINC00645-203ENST00000557399 RABGEF1Q9UJ41 708 aa4.33□□□□□ -1.72
LINC00645-203ENST00000557399 QRICH2Q9H0J4 1663 aa4.33□□□□□ -1.72
LINC00645-203ENST00000557399 ADAM33Q9BZ11 813 aa4.33□□□□□ -1.72
LINC00645-203ENST00000557399 CEP152O94986 1710 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 USP54Q70EL1 1684 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 RGS20O76081 388 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 NECTIN2Q92692 538 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 TNS1Q9HBL0 1735 aaKnown RBP4.32□□□□□ -1.72
LINC00645-203ENST00000557399 NRXN3Q9Y4C0 1643 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 NLRP1Q9C000 1473 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 NALCNQ8IZF0 1738 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 IFT172Q9UG01 1749 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 TRAPPC8Q9Y2L5 1435 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 C6orf132Q5T0Z8 1188 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 DMRTA1Q5VZB9 504 aa4.32□□□□□ -1.72
LINC00645-203ENST00000557399 NRAPQ86VF7 1730 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 USP32Q8NFA0 1604 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 NWD2Q9ULI1 1742 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 TRIM6-TRIM34B2RNG4 842 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 KCNV2Q8TDN2 545 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 UPF1Q92900 1129 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00645-203ENST00000557399 NKTRP30414 1462 aaKnown RBP4.31□□□□□ -1.72
LINC00645-203ENST00000557399 ARHGAP31Q2M1Z3 1444 aa4.31□□□□□ -1.72
LINC00645-203ENST00000557399 EEA1Q15075 1411 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 MYT1LQ9UL68 1186 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 NEXMIFQ5QGS0 1516 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 CARMIL1Q5VZK9 1371 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 CCDC18Q5T9S5 1454 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 ADGRB3O60242 1522 aa4.3□□□□□ -1.72
LINC00645-203ENST00000557399 RNF166Q96A37 237 aaPredicted RBP4.3□□□□□ -1.72
LINC00645-203ENST00000557399 NBPF3Q9H094 633 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 HCSTQ9UBK5 93 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 ROBO1Q9Y6N7 1651 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 PRSS12P56730 875 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 CASZ1Q86V15 1759 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 TRPM1Q7Z4N2 1603 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 LRRC7Q96NW7 1537 aa4.29□□□□□ -1.72
LINC00645-203ENST00000557399 FAM69CQ0P6D2 419 aa4.28□□□□□ -1.72
LINC00645-203ENST00000557399 KCNK17Q96T54 332 aa4.28□□□□□ -1.72
LINC00645-203ENST00000557399 PACS2Q86VP3 889 aa4.28□□□□□ -1.73
LINC00645-203ENST00000557399 PHLPP1O60346 1717 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 SHANK2Q9UPX8 1470 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 RGPD1P0DJD0 1748 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 COL9A1P20849 921 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 NBR1Q14596 966 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 NBPF26B4DH59 902 aa4.27□□□□□ -1.73
LINC00645-203ENST00000557399 SETBP1Q9Y6X0 1596 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 UHRF1BP1Q6BDS2 1440 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 PLCH1Q4KWH8 1693 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 FYCO1Q9BQS8 1478 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 MBD5Q9P267 1494 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 FAM98CQ17RN3 349 aaKnown RBP4.26□□□□□ -1.73
LINC00645-203ENST00000557399 SYCP2Q9BX26 1530 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 FCHSD2O94868 740 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 PSEN2P49810 448 aa4.26□□□□□ -1.73
LINC00645-203ENST00000557399 NPDC1Q9NQX5 325 aaPredicted RBP4.26□□□□□ -1.73
LINC00645-203ENST00000557399 THSD7AQ9UPZ6 1657 aa4.25□□□□□ -1.73
LINC00645-203ENST00000557399 HAP1P54257 671 aaPredicted RBP4.25□□□□□ -1.73
LINC00645-203ENST00000557399 DUOX2Q9NRD8 1548 aa4.25□□□□□ -1.73
LINC00645-203ENST00000557399 PRIM1P49642 420 aaKnown RBP4.25□□□□□ -1.73
LINC00645-203ENST00000557399 KDM2AQ9Y2K7 1162 aa4.25□□□□□ -1.73
LINC00645-203ENST00000557399 PTGDRQ13258 359 aa4.25□□□□□ -1.73
LINC00645-203ENST00000557399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.24□□□□□ -1.73
LINC00645-203ENST00000557399 FAM135BQ49AJ0 1406 aa4.24□□□□□ -1.73
LINC00645-203ENST00000557399 GPR37O15354 613 aa4.24□□□□□ -1.73
LINC00645-203ENST00000557399 STAC3Q96MF2 364 aa4.24□□□□□ -1.73
LINC00645-203ENST00000557399 EYA1Q99502 592 aa4.24□□□□□ -1.73
LINC00645-203ENST00000557399 SOWAHBA6NEL2 793 aa4.24□□□□□ -1.73
LINC00645-203ENST00000557399 ITGBL1O95965 494 aaPredicted RBP4.24□□□□□ -1.73
LINC00645-203ENST00000557399 NUP188Q5SRE5 1749 aa4.23□□□□□ -1.73
LINC00645-203ENST00000557399 PEAK1Q9H792 1746 aa4.23□□□□□ -1.73
LINC00645-203ENST00000557399 THSD4Q6ZMP0 1018 aa4.23□□□□□ -1.73
LINC00645-203ENST00000557399 ANKRD13DQ6ZTN6 518 aa4.23□□□□□ -1.73
LINC00645-203ENST00000557399 MRPL50Q8N5N7 158 aaKnown RBP4.23□□□□□ -1.73
LINC00645-203ENST00000557399 TROQ12816 1431 aaPredicted RBP4.23□□□□□ -1.73
LINC00645-203ENST00000557399 CDCA7LQ96GN5 454 aa4.23□□□□□ -1.73
LINC00645-203ENST00000557399 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.23□□□□□ -1.73
LINC00645-203ENST00000557399 TULP1O00294 542 aaPredicted RBP4.22□□□□□ -1.73
LINC00645-203ENST00000557399 HIC1Q14526 733 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 PRR14Q9BWN1 585 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 BCL9LQ86UU0 1499 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 KIF1AQ12756 1690 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 MST1RQ04912 1400 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 MYO5BQ9ULV0 1848 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 EHBP1L1Q8N3D4 1523 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 OATP04181 439 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 ANKK1Q8NFD2 765 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 KIAA1468Q9P260 1216 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 DCCP43146 1447 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 MAP3K7O43318 606 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 TATDN2Q93075 761 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 TSKSQ9UJT2 592 aa4.22□□□□□ -1.73
LINC00645-203ENST00000557399 SCAF11Q99590 1463 aaKnown RBP4.21□□□□□ -1.73
LINC00645-203ENST00000557399 DDX12PQ92771 950 aa4.21□□□□□ -1.73
LINC00645-203ENST00000557399 TRPM3Q9HCF6 1732 aaPredicted RBP4.21□□□□□ -1.74
LINC00645-203ENST00000557399 CASKIN1Q8WXD9 1431 aa4.21□□□□□ -1.74
LINC00645-203ENST00000557399 BRWD3Q6RI45 1802 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms